BLASTX 7.6.2
Query= UN18897 /QuerySize=1084
(1083 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associa... 77 2e-013
sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizos... 74 1e-012
sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synapto... 72 6e-012
sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associa... 71 1e-011
sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associa... 70 2e-011
sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associa... 70 2e-011
sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associa... 70 3e-011
sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associate... 70 3e-011
sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associa... 69 4e-011
sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associate... 64 1e-009
sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associa... 64 2e-009
sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associa... 61 1e-008
sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associa... 61 1e-008
sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associate... 61 1e-008
sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associ... 54 2e-006
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein
C16G5.05c OS=Schizosaccharomyces pombe GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 77 bits (188), Expect = 2e-013
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Frame = -2
Query: 890 NKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQAQKEAPA-DMQCKDKFLLQ 714
N V FKVKTT PK YCVRPN+G + P+ST V V +QA KE PA D +C+DKFL+Q
Sbjct: 27 NPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDKFLIQ 86
Query: 713 GVTASPGITAKDVTPEMF---SKEAGYLVEETKLRVTYVAPPLPPSPVREGSEEGSSPRA 543
+ T+ F ++ G + + K+R Y + PP + E S+
Sbjct: 87 SMAIGDADTSNVENYHEFWTEMEKQGRSIFDRKIRCVY-STKQPPQSADKQVENTSTSNP 145
Query: 542 SVSDNG 525
VS G
Sbjct: 146 PVSVEG 151
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces
pombe GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 74 bits (181), Expect = 1e-012
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = -2
Query: 938 FPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQAQK 759
FP L + + C L L N + FKVKTT PK+YCVRPN G + S V V +Q
Sbjct: 11 FPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQPLD 70
Query: 758 EAPA-DMQCKDKFLLQGVTASPGITAKDVTPEMFSKEAGYLVEETKLRVTYVAPP 597
PA +C+DKFL+Q P + D+ +++++ + + E K+R Y P
Sbjct: 71 HEPAPGTKCRDKFLVQSTELKPELQGMDIA-DIWTQVSKANISERKIRCVYSEGP 124
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding
protein OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 72 bits (175), Expect = 6e-012
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 16/134 (11%)
Frame = -2
Query: 980 SNSELLTVEPL-DLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVL 804
S+ + L +EP +L+F ++ L L+N TD + FKVKTT PK+YCVRPN+G++
Sbjct: 3 SHEQALILEPAGELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILE 62
Query: 803 PRSTCEVLVTMQAQKEAPADMQCKDKFLLQG------VTASPGITAKDVTPEMFSKEAGY 642
P+++ V V +Q P + K KF++Q V S + KD PE
Sbjct: 63 PKTSIAVAVMLQPFNYDPNEKN-KHKFMVQSMYAPDHVVESQELLWKDAPPES------- 114
Query: 641 LVEETKLRVTYVAP 600
+ +TKLR + P
Sbjct: 115 -LMDTKLRCVFEMP 127
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein
SCS2 OS=Saccharomyces cerevisiae GN=SCS2 PE=1 SV=3
Length = 244
Score = 71 bits (173), Expect = 1e-011
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Frame = -2
Query: 959 VEPLDLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVL 780
+ P L + L +Q + ++N +D +AFKVKTT PK YCVRPN VV P T +V
Sbjct: 6 ISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQ 65
Query: 779 VTMQAQKEAP-ADMQCKDKFLLQGVTASPGITAKDVTPEMFSKEAGYLVE--ETKLRVTY 609
V E P AD +C+DKFL+ + + + K V EA + + K++V Y
Sbjct: 66 VIFLGLTEEPAADFKCRDKFLVITLPSPYDLNGKAVADVWSDLEAEFKQQAISKKIKVKY 125
Query: 608 -VAPPLPPSPVREGSEEGSSPRASVSDN 528
++P + P+ + E + V D+
Sbjct: 126 LISPDVHPAQNQNIQENKETVEPVVQDS 153
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A
OS=Homo sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 70 bits (171), Expect = 2e-011
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 15/153 (9%)
Frame = -2
Query: 953 PLDLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVT 774
P DL+F ++ +L L N +D V FKVKTT P++YCVRPN+G++ P ST V V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 773 MQAQKEAPADMQCKDKFLLQGVTASPGITAKDVTPEMFSKEAGYLVEETKLRVTYVAP-- 600
+Q P + + K KF++Q + A P + + ++ + + ++KLR + P
Sbjct: 80 LQPFDYDPNE-KSKHKFMVQTIFAPPNTSDMEA---VWKEAKPDELMDSKLRCVFEMPNE 135
Query: 599 --------PLPPSPVREGSEEGSSPRA-SVSDN 528
P P+ ++G P+ SVS N
Sbjct: 136 NDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLN 168
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A
OS=Pongo abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 70 bits (171), Expect = 2e-011
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 15/153 (9%)
Frame = -2
Query: 953 PLDLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVT 774
P DL+F ++ +L L N +D V FKVKTT P++YCVRPN+G++ P ST V V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 773 MQAQKEAPADMQCKDKFLLQGVTASPGITAKDVTPEMFSKEAGYLVEETKLRVTYVAP-- 600
+Q P + + K KF++Q + A P + + ++ + + ++KLR + P
Sbjct: 80 LQPFDYDPNE-KSKHKFMVQTIFAPPNTSDMEA---VWKEAKPDELMDSKLRCVFEMPNE 135
Query: 599 --------PLPPSPVREGSEEGSSPRA-SVSDN 528
P P+ ++G P+ SVS N
Sbjct: 136 NDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLN 168
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A
OS=Bos taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 70 bits (169), Expect = 3e-011
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Frame = -2
Query: 953 PLDLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVT 774
P DL+F ++ +L L N +D V FKVKTT P++YCVRPN+G++ P T V V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTVTVSVM 79
Query: 773 MQAQKEAPADMQCKDKFLLQGVTASPGITAKDVTPEMFSKEAGYLVEETKLRVTYVAP-- 600
+Q P + + K KF++Q + A P I+ + ++ + + ++KLR + P
Sbjct: 80 LQPFDYDPNE-KSKHKFMVQTIFAPPNISDMEA---VWKEAKPDELMDSKLRCVFEMPNE 135
Query: 599 --------PLPPSPVREGSEEGSSPR---ASVSD 531
P P+ ++G P+ S+SD
Sbjct: 136 NDKLNDMEPSKAVPLNAAKQDGPVPKPHSVSLSD 169
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A
OS=Rattus norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 70 bits (169), Expect = 3e-011
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 15/153 (9%)
Frame = -2
Query: 953 PLDLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVT 774
P DL+F ++ +L L N +D V FKVKTT P++YCVRPN+GV+ P S V V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVM 79
Query: 773 MQAQKEAPADMQCKDKFLLQGVTASPGITAKDVTPEMFSKEAGYLVEETKLRVTYVAP-- 600
+Q P + + K KF++Q + A P I+ + ++ + + ++KLR + P
Sbjct: 80 LQPFDYDPNE-KSKHKFMVQTIFAPPNISDMEA---VWKEAKPDELMDSKLRCVFEMPNE 135
Query: 599 --------PLPPSPVREGSEEGSSPRA-SVSDN 528
P P+ ++G P+ SVS N
Sbjct: 136 NDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLN 168
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A
OS=Mus musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 69 bits (168), Expect = 4e-011
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 15/153 (9%)
Frame = -2
Query: 953 PLDLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVT 774
P DL+F ++ +L L N +D V FKVKTT P++YCVRPN+G++ P S V V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVM 79
Query: 773 MQAQKEAPADMQCKDKFLLQGVTASPGITAKDVTPEMFSKEAGYLVEETKLRVTYVAP-- 600
+Q P + + K KF++Q + A P I+ + ++ + + ++KLR + P
Sbjct: 80 LQPFDYDPNE-KSKHKFMVQTIFAPPNISDMEA---VWKEAKPDELMDSKLRCVFEMPNE 135
Query: 599 --------PLPPSPVREGSEEGSSPRA-SVSDN 528
P P+ ++G P+ SVS N
Sbjct: 136 NDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLN 168
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B
OS=Rattus norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 64 bits (155), Expect = 1e-009
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Frame = -2
Query: 971 ELLTVEPL-DLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRS 795
++L++EP +L+F ++ +L L N TD +V FKVKTT P++YCVRPN+GV+ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGA 65
Query: 794 TCEVLVTMQAQKEAPADMQCKDKFLLQGVTASPGITAKDVTPEMFSKEAGYLVEETKLRV 615
+ V V +Q P + + K KF++Q + A P + + + E + ++KLR
Sbjct: 66 SLNVSVMLQPFDYDPNE-KSKHKFMVQSMFAPPDTSDMEAVWKEAKPED---LMDSKLRC 121
Query: 614 TYVAP 600
+ P
Sbjct: 122 VFELP 126
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B
OS=Mus musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 64 bits (154), Expect = 2e-009
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Frame = -2
Query: 971 ELLTVEPL-DLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRS 795
++L++EP +L+F ++ +L L N TD +V FKVKTT P++YCVRPN+GV+ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGA 65
Query: 794 TCEVLVTMQAQKEAPADMQCKDKFLLQGVTASPGITAKDVTPEMFSKEAGYLVEETKLRV 615
+ V V +Q P + + K KF++Q + A P + + + E + ++KLR
Sbjct: 66 SLNVSVMLQPFDYDPNE-KSKHKFMVQSMFAPPDTSDMEAVWKEAKPED---LMDSKLRC 121
Query: 614 TYVAP 600
+ P
Sbjct: 122 VFELP 126
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B
OS=Bos taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 61 bits (147), Expect = 1e-008
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = -2
Query: 971 ELLTVEPL-DLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRS 795
++L++EP +L+F ++ +L L N TD +V FKVKTT P++YCVRPN+G++ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 794 TCEVLVTMQAQKEAPADMQCKDKFLLQGVTA 702
+ V V +Q P + + K KF++Q + A
Sbjct: 66 SINVSVMLQPFDYDPNE-KSKHKFMVQSMFA 95
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C
OS=Homo sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 61 bits (147), Expect = 1e-008
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = -2
Query: 971 ELLTVEPL-DLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRS 795
++L++EP +L+F ++ +L L N TD +V FKVKTT P++YCVRPN+G++ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 794 TCEVLVTMQAQKEAPADMQCKDKFLLQGVTA 702
+ V V +Q P + + K KF++Q + A
Sbjct: 66 SINVSVMLQPFDYDPNE-KSKHKFMVQSMFA 95
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B
OS=Sus scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 61 bits (147), Expect = 1e-008
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = -2
Query: 971 ELLTVEPL-DLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRS 795
++L++EP +L+F ++ +L L N TD +V FKVKTT P++YCVRPN+G++ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 794 TCEVLVTMQAQKEAPADMQCKDKFLLQGVTA 702
+ V V +Q P + + K KF++Q + A
Sbjct: 66 SINVSVMLQPFDYDPNE-KSKHKFMVQSMFA 95
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein
SCS22 OS=Saccharomyces cerevisiae GN=SCS22 PE=1 SV=2
Length = 175
Score = 54 bits (128), Expect = 2e-006
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Frame = -2
Query: 965 LTVEPLDLQFPFELKKQISCSLYLTNKTDNHVAFKVKTTNPKKYCVRPNTGVVLPRSTCE 786
+ + P L F L KQ + + L N + V FKV+T+ P KYCVRPN ++ +
Sbjct: 1 MRIVPEKLVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESVN 60
Query: 785 VLVTMQAQKEAPAD---MQCKDKFLLQGVTASPGITAKDVTPEMFSKEAGYLVEETKLRV 615
V + ++ AD Q +DKFL+ VT ++V + L E+ K +
Sbjct: 61 VQIVFLGLPKSTADDEMDQKRDKFLI--VTLPIPAAYQNVEDGELLSDWPNLEEQYKDDI 118
Query: 614 TY----VAPPLPPSPVREGSEEGSSPRASVSDNGQA 519
+ + + P G+ + S RA + NGQ+
Sbjct: 119 VFKKIKIFHSVLPKRKPSGNHDAESARAPSAGNGQS 154
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,378,909,851
Number of Sequences: 518415
Number of Extensions: 78378909851
Number of Successful Extensions: 523441567
Number of sequences better than 0.0: 0
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