BLASTX 7.6.2
Query= UN18940 /QuerySize=882
(881 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P32980|ATPD_TOBAC ATP synthase delta chain, chloroplastic OS=... 267 7e-071
sp|Q02758|ATPD_PEA ATP synthase delta chain, chloroplastic OS=Pi... 252 3e-066
sp|P11402|ATPD_SPIOL ATP synthase delta chain, chloroplastic OS=... 241 6e-063
sp|Q07300|ATPD_SORBI ATP synthase delta chain, chloroplastic OS=... 200 1e-050
sp|Q42687|ATPD_CHLRE ATP synthase delta chain, chloroplastic OS=... 139 2e-032
sp|B8HPK0|ATPD_CYAP4 ATP synthase subunit delta OS=Cyanothece sp... 97 1e-019
sp|B0JWV0|ATPD_MICAN ATP synthase subunit delta OS=Microcystis a... 95 5e-019
sp|B7KKR5|ATPD_CYAP7 ATP synthase subunit delta OS=Cyanothece sp... 93 2e-018
sp|Q112Z5|ATPD_TRIEI ATP synthase subunit delta OS=Trichodesmium... 92 4e-018
sp|Q4G398|ATPD_EMIHU ATP synthase subunit delta, chloroplastic O... 91 9e-018
sp|P35010|ATPD_GALSU ATP synthase subunit delta, chloroplastic O... 91 1e-017
sp|A2BYH7|ATPD_PROM5 ATP synthase subunit delta OS=Prochlorococc... 90 2e-017
sp|Q7V036|ATPD_PROMP ATP synthase subunit delta OS=Prochlorococc... 90 2e-017
sp|B1WUI1|ATPD_CYAA5 ATP synthase subunit delta OS=Cyanothece sp... 89 4e-017
sp|Q40610|ATPD_OCHNE ATP synthase subunit delta, chloroplastic O... 88 8e-017
sp|A3PEU0|ATPD_PROM0 ATP synthase subunit delta OS=Prochlorococc... 88 8e-017
sp|Q8DLP4|ATPD_THEEB ATP synthase subunit delta OS=Thermosynecho... 88 8e-017
sp|B7K5I7|ATPD_CYAP8 ATP synthase subunit delta OS=Cyanothece sp... 87 1e-016
sp|A2BT26|ATPD_PROMS ATP synthase subunit delta OS=Prochlorococc... 87 2e-016
sp|A8G6V2|ATPD_PROM2 ATP synthase subunit delta OS=Prochlorococc... 86 3e-016
>sp|P32980|ATPD_TOBAC ATP synthase delta chain, chloroplastic OS=Nicotiana
tabacum GN=ATPD PE=2 SV=1
Length = 248
Score = 267 bits (682), Expect = 7e-071
Identities = 142/223 (63%), Positives = 174/223 (78%), Gaps = 5/223 (2%)
Frame = +3
Query: 81 PPSSFHIAVSLPLRKTSLPLRI-----RGGNAAGARMSATAAGSYAMALADVAKRNDTLE 245
P + + L L K ++ LR RGG AAG++M A+AAGSYA ALAD+AK N TLE
Sbjct: 25 PTAKLSFSGGLKLPKLTIKLRSNRTSRRGGGAAGSKMVASAAGSYANALADIAKSNGTLE 84
Query: 246 LTSADVEKLENVFSDPQVLNFFANPTVEVEKKRLVIDEIVKASSLQTHTSNFLNLLVDAN 425
T+AD+EK+E + D V NFF +P V EKKR ++DEIV +SS+Q H +NFLN+LVD
Sbjct: 85 QTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVDEIVSSSSIQPHVANFLNILVDMK 144
Query: 426 RVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIAKQVQKLTGAKNVRVKTVL 605
RV+++ +IVKEFE VYN +TDT+LA V SVVKLE LAQIAK VQ+LTG+KNVR+KTV+
Sbjct: 145 RVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQHLAQIAKGVQRLTGSKNVRIKTVI 204
Query: 606 DPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIAAQLELGEIQLA 734
D SLVAGFTIRYG+SGSKLIDMSVKKQLEDIAAQLE+G+IQLA
Sbjct: 205 DESLVAGFTIRYGNSGSKLIDMSVKKQLEDIAAQLEIGDIQLA 247
>sp|Q02758|ATPD_PEA ATP synthase delta chain, chloroplastic OS=Pisum sativum
GN=ATPD PE=1 SV=1
Length = 251
Score = 252 bits (642), Expect = 3e-066
Identities = 129/212 (60%), Positives = 164/212 (77%), Gaps = 4/212 (1%)
Frame = +3
Query: 99 IAVSLPLRKTSLPLRIRGGNAAGARMSATAAGSYAMALADVAKRNDTLELTSADVEKLEN 278
+ + LPL KT R G A GARMS+ AAGSYA ALAD+A N+TL+ +AD +K+E
Sbjct: 43 LKLKLPLTKT----RRSTGGALGARMSSLAAGSYAAALADLANSNNTLDAITADFDKIEQ 98
Query: 279 VFSDPQVLNFFANPTVEVEKKRLVIDEIVKASSLQTHTSNFLNLLVDANRVDIVTDIVKE 458
+FSDP+V ++F++P VE KR +I E S Q HT NFLN+L+D+ R+D++ DI+KE
Sbjct: 99 LFSDPKVFDYFSSPIVEDSTKRQLIGEFATTSGFQPHTHNFLNVLIDSKRIDMIIDIIKE 158
Query: 459 FEIVYNKITDTQLAEVRSVVKLEPPQLAQIAKQVQKLTGAKNVRVKTVLDPSLVAGFTIR 638
FE VYN +TDT+L V SVVKLE LAQIAKQVQKLTGAK VR KT+LDPSLVAGFT+R
Sbjct: 159 FEFVYNTLTDTELVVVTSVVKLESHHLAQIAKQVQKLTGAKKVRTKTLLDPSLVAGFTVR 218
Query: 639 YGDSGSKLIDMSVKKQLEDIAAQLELGEIQLA 734
YG++GSK IDMSVK++LE+IAAQ++LG+IQLA
Sbjct: 219 YGNTGSKFIDMSVKRKLEEIAAQIDLGDIQLA 250
>sp|P11402|ATPD_SPIOL ATP synthase delta chain, chloroplastic OS=Spinacia
oleracea GN=ATPD PE=1 SV=2
Length = 257
Score = 241 bits (614), Expect = 6e-063
Identities = 132/239 (55%), Positives = 172/239 (71%), Gaps = 2/239 (0%)
Frame = +3
Query: 18 SLSLSAMASLQQTMFSLQSKLPPSSFHIAVSLPLRKTSLPLRIRGGNAAGARMSATAAGS 197
+LS S+ S + FSL ++F+ L + L + RGG A G RM + A
Sbjct: 20 ALSTSSTTSTPKP-FSLSFSSSTATFNPLRLKILTASKLTAKPRGG-ALGTRMVDSTASR 77
Query: 198 YAMALADVAKRNDTLELTSADVEKLENVFSDPQVLNFFANPTVEVEKKRLVIDEIVKASS 377
YA ALADVA TLE T++DVEKL +FS+ V FFANP + ++ KR V+DEI+ S
Sbjct: 78 YASALADVADVTGTLEATNSDVEKLIRIFSEEPVYYFFANPVISIDNKRSVLDEIITTSG 137
Query: 378 LQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIAKQ 557
LQ HT+NF+N+L+D+ R+++V +I+ EFE V+NKIT T++A V SVVKLE LAQIAK
Sbjct: 138 LQPHTANFINILIDSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLENDHLAQIAKG 197
Query: 558 VQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIAAQLELGEIQLA 734
VQK+TGAKNVR+KTV+DPSLVAGFTIRYG+ GSKL+DMSVKKQLE+IAAQLE+ ++ LA
Sbjct: 198 VQKITGAKNVRIKTVIDPSLVAGFTIRYGNEGSKLVDMSVKKQLEEIAAQLEMDDVTLA 256
>sp|Q07300|ATPD_SORBI ATP synthase delta chain, chloroplastic OS=Sorghum bicolor
GN=ATPD PE=2 SV=1
Length = 247
Score = 200 bits (507), Expect = 1e-050
Identities = 115/240 (47%), Positives = 159/240 (66%), Gaps = 4/240 (1%)
Frame = +3
Query: 15 FSLSLSAMASLQQTMFSLQSKLPPSSF-HIAVSLPLRKTSLPLRIRGGNAAGARMSATAA 191
F+L +A A+ + + + +SF A LP + + P R G+ R A AA
Sbjct: 9 FTLRPAAAAAASASSGATPAAPRSASFARAARGLPSLRLAPPR--RRGDLVRPRAEA-AA 65
Query: 192 GSYAMALADVAKRNDTLELTSADVEKLENVFSDPQVLNFFANPTVEVEKKRLVIDEIVKA 371
SYA AL++VA N TLE T +D+EKL+ +F+D V FF NPTV E+K +IDEI K+
Sbjct: 66 DSYASALSEVAVENGTLEQTVSDLEKLQKIFADETVAEFFDNPTVPREEKTALIDEIAKS 125
Query: 372 SSLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIA 551
LQ H NF+N++VD R I+ +IV EFE ++N +T T++A V SVV+LE LAQIA
Sbjct: 126 YELQPHVVNFINVVVDNFRATILPEIVVEFENIFNSLTGTEVATVTSVVQLESQDLAQIA 185
Query: 552 KQVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIAAQLELGEIQL 731
+ VQK+TGAKNVR+KT LDP L+AGFT++YG GS LIDMSV+KQ+E+I ++ EL ++ L
Sbjct: 186 QHVQKMTGAKNVRLKTQLDPELIAGFTVQYGRDGSSLIDMSVRKQIEEITSEFELPDVPL 245
>sp|Q42687|ATPD_CHLRE ATP synthase delta chain, chloroplastic OS=Chlamydomonas
reinhardtii GN=ATPD PE=1 SV=1
Length = 219
Score = 139 bits (350), Expect = 2e-032
Identities = 77/173 (44%), Positives = 115/173 (66%), Gaps = 4/173 (2%)
Frame = +3
Query: 195 SYAMALADVAKRNDTLELTSADVEKLENVFSDPQVLN-FFANPTVEVEKKRLVIDEIVKA 371
SYA AL ++A LE ADV+ + + + L+ NP VE +KKR V+ +I K
Sbjct: 41 SYAKALVELADEKGKLEAVHADVDAVAGLMKENAKLSALIMNPVVESDKKRAVLAKIAKE 100
Query: 372 SSLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIA 551
+ Q +T N+LNLLV+ +R+ +V +I + FE +Y ++TDTQ+A +RS VKLE Q IA
Sbjct: 101 AGFQQYTINWLNLLVEKDRLSLVPEICECFEDLYCQMTDTQVATLRSAVKLEQEQQFLIA 160
Query: 552 KQVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIAAQL 710
K++Q+LTG+KN+++K V+D SL+AGF + Y GS ID+SV+ Q+E +A QL
Sbjct: 161 KKLQELTGSKNIKLKPVIDSSLIAGFVVEY---GSSQIDLSVRGQIERVADQL 210
>sp|B8HPK0|ATPD_CYAP4 ATP synthase subunit delta OS=Cyanothece sp. (strain PCC
7425 / ATCC 29141) GN=atpH PE=3 SV=1
Length = 185
Score = 97 bits (240), Expect = 1e-019
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 5/172 (2%)
Frame = +3
Query: 198 YAMALADVAKRNDTLELTSADVE-KLENVFSDPQVLNFFANPTVEVEKKRLVIDEIVKAS 374
YA AL +A+ N+ DV L+ + + P++ ANP V+ E K+ ++ ++V A
Sbjct: 14 YAEALMSLAQSNNLTGRFGEDVAFILDLLKTSPELQQVLANPFVKPESKKAILRQLV-AP 72
Query: 375 SLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIAK 554
+ FL LLVD R+ ++ I K+F+ + K+T+T LAEV SVV+L PQ + +
Sbjct: 73 QVHDFVLKFLLLLVDRRRIFLLEPICKQFQALLRKLTNTVLAEVTSVVELTEPQRQAVIE 132
Query: 555 QVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIAAQL 710
+V+ +TG++ V ++T LDP L+ G ++ GS+++D S++ QL I+ L
Sbjct: 133 KVKTMTGSQQVELETRLDPELIGGVIVKV---GSQVLDSSIRGQLRRISNTL 181
>sp|B0JWV0|ATPD_MICAN ATP synthase subunit delta OS=Microcystis aeruginosa
(strain NIES-843) GN=atpH PE=3 SV=1
Length = 182
Score = 95 bits (235), Expect = 5e-019
Identities = 57/180 (31%), Positives = 102/180 (56%), Gaps = 5/180 (2%)
Frame = +3
Query: 165 GARMSATAAGSYAMALADVAKRNDTLELTSADVEK-LENVFSDPQVLNFFANPTVEVEKK 341
G+ +S+ A YA AL VA+ + LE +++ LE + + P + F NP ++ E K
Sbjct: 3 GSLISSEIAEPYAQALLSVAQSSGQLEAIGGEIKSLLELLENAPDLRAFIGNPVIKEEAK 62
Query: 342 RLVIDEIVKASSLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVK 521
+ V+ +++ SS + +NF+ LLVD R+ + + +++ + +T+T LAEV S +
Sbjct: 63 KAVLSQVM-GSSANPYLTNFMMLLVDKRRIQFLEPVCQQYLTLARVLTNTVLAEVSSATE 121
Query: 522 LEPPQLAQIAKQVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIA 701
L Q + +V+ LTGA V +KT +D SL+ G I+ GS++ D S++ QL+ ++
Sbjct: 122 LNDSQKQIVIDKVKTLTGANVVELKTKVDGSLIGGVVIKV---GSQVFDASIRGQLQRLS 178
>sp|B7KKR5|ATPD_CYAP7 ATP synthase subunit delta OS=Cyanothece sp. (strain PCC
7424) GN=atpH PE=3 SV=1
Length = 184
Score = 93 bits (230), Expect = 2e-018
Identities = 53/183 (28%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Frame = +3
Query: 165 GARMSATAAGSYAMALADVAKRNDTLELTSADVEKLENVFSD-PQVLNFFANPTVEVEKK 341
G+ +S A YA AL V++ N+ E D+ L ++ ++ P++ F +NP + E K
Sbjct: 3 GSSLSLEIAEPYAQALMSVSQSNNLTERFGEDIRSLLDLLNNSPELREFLSNPVIREENK 62
Query: 342 RLVIDEIVKASSLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVK 521
+ ++ I+ + NFL LLVD R+ + + +++ + ++T+T LAEV S +
Sbjct: 63 KEILQRIM-GDQTHPYLRNFLMLLVDKRRIAFLEQVCEQYLALLRQLTNTVLAEVVSATE 121
Query: 522 LEPPQLAQIAKQVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIA 701
L Q + +V+ ++GA+ V +K ++P L+ G I+ GS+++D S++ QL I+
Sbjct: 122 LNDEQRQSVIDKVKTISGAQAVELKASINPDLIGGVIIKI---GSQILDASIRGQLRRIS 178
Query: 702 AQL 710
L
Sbjct: 179 LSL 181
>sp|Q112Z5|ATPD_TRIEI ATP synthase subunit delta OS=Trichodesmium erythraeum
(strain IMS101) GN=atpH PE=3 SV=1
Length = 182
Score = 92 bits (227), Expect = 4e-018
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 5/172 (2%)
Frame = +3
Query: 198 YAMALADVAKRNDTLELTSADVEKLENVFSD-PQVLNFFANPTVEVEKKRLVIDEIVKAS 374
YA AL +A+ D + + DV L N+ + P+ F NP ++ E K+ V+ ++
Sbjct: 12 YAAALMSLAQSKDLTDKFAEDVRSLINILDESPEFKQFVGNPVIKQEDKKAVVKRML-GE 70
Query: 375 SLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIAK 554
+ NFL LL+D R+ + I K++ + ++ T LAEV S V+L Q I +
Sbjct: 71 QVDPLMRNFLMLLIDKGRITFLEQIGKQYLALLRELNQTVLAEVTSTVELNENQKNTIRE 130
Query: 555 QVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIAAQL 710
+V+ +T A+ V ++T +DPS++ G I+ GS++ID S++ QL I L
Sbjct: 131 RVKSMTSAREVEIETKVDPSILGGVIIKI---GSQIIDSSLQGQLRRIGISL 179
>sp|Q4G398|ATPD_EMIHU ATP synthase subunit delta, chloroplastic OS=Emiliania
huxleyi GN=atpD PE=3 SV=1
Length = 180
Score = 91 bits (224), Expect = 9e-018
Identities = 57/172 (33%), Positives = 97/172 (56%), Gaps = 5/172 (2%)
Frame = +3
Query: 198 YAMALADVAKRNDTLELTSADVEKLENVFSDPQVL-NFFANPTVEVEKKRLVIDEIVKAS 374
YA AL ++A N +L+ T+ D+ + ++ L F NP + + K+ V+ +++
Sbjct: 10 YAEALLELANANSSLKETTNDINIVSQFLANSSDLKKFLGNPLITRDAKKGVLKDVL-GE 68
Query: 375 SLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIAK 554
+ T FL LLVD R+ + I +F + K ++A+V S V+L Q IA+
Sbjct: 69 QIGEKTLTFLMLLVDRGRIAYLDGIAYKFLELSYKEESIEIAKVTSSVQLSAQQQKTIAE 128
Query: 555 QVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIAAQL 710
+++K+TGAK +++ +DP L+ GFTI + GSKLID S++ QL+ I+ L
Sbjct: 129 KLKKITGAKQIKLALKVDPQLIGGFTI---EIGSKLIDTSIRGQLKQISTLL 177
>sp|P35010|ATPD_GALSU ATP synthase subunit delta, chloroplastic OS=Galdieria
sulphuraria GN=atpD PE=3 SV=1
Length = 177
Score = 91 bits (223), Expect = 1e-017
Identities = 51/167 (30%), Positives = 97/167 (58%), Gaps = 5/167 (2%)
Frame = +3
Query: 198 YAMALADVAKRNDTLELTSADVEKLENVFSD-PQVLNFFANPTVEVEKKRLVIDEIVKAS 374
YA L ++A ++L + + +++V P+ F NP + + K+ I +IV +
Sbjct: 11 YAEGLFEIANTKNSLAEINEQLNSIKSVLKQMPEFYYFLVNPLISQQIKKNTI-KIVFNN 69
Query: 375 SLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIAK 554
+L T NFL +L++ R+ DIV +F +++NK T+T + E+ SV+ L Q +
Sbjct: 70 NLDKITLNFLLILIERRRIIYFYDIVDQFILIWNKATNTSVVEIASVISLTEKQQQYLIN 129
Query: 555 QVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLED 695
+++++T A +++K +DPSL+ G I++ GS LID+S+K +L++
Sbjct: 130 KLKEITKANYIKLKLKIDPSLIGGLIIKF---GSNLIDLSLKGKLKN 173
>sp|A2BYH7|ATPD_PROM5 ATP synthase subunit delta OS=Prochlorococcus marinus
(strain MIT 9515) GN=atpH PE=3 SV=1
Length = 180
Score = 90 bits (222), Expect = 2e-017
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 5/168 (2%)
Frame = +3
Query: 198 YAMALADVAKRNDTLELTSADVEKLENVFSD-PQVLNFFANPTVEVEKKRLVIDEIVKAS 374
YA AL V ND E +V++L + +D P++ ++P +E E KR +I EI +
Sbjct: 11 YAEALLQVVNENDQTEEMVNEVKQLLTLINDAPELEKTLSSPVLETETKRKIIIEIF-SD 69
Query: 375 SLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIAK 554
+ + NFL LL D R+ IVT I+ F ++ + ++ LA V S V+L Q I K
Sbjct: 70 RINSSLLNFLKLLADRQRIGIVTSILNRFLEIHRENSNIALATVTSAVELTDDQKGLITK 129
Query: 555 QVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDI 698
++ + G + + + T +DPSL+ GF GSK+ID S+ Q+ +
Sbjct: 130 KIINIAGTEKLELVTKIDPSLIGGFV---ASVGSKVIDASLASQIRKL 174
>sp|Q7V036|ATPD_PROMP ATP synthase subunit delta OS=Prochlorococcus marinus
subsp. pastoris (strain CCMP1986 / MED4) GN=atpH PE=3 SV=1
Length = 180
Score = 90 bits (221), Expect = 2e-017
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 5/168 (2%)
Frame = +3
Query: 198 YAMALADVAKRNDTLELTSADVEKLENVFSD-PQVLNFFANPTVEVEKKRLVIDEIVKAS 374
YA AL V ND E +V++L ++ +D P + ++P +E + K+ +I EI +
Sbjct: 11 YAEALLQVVSENDQTEEMVKEVKQLLSLINDSPDLEKTLSSPVLETDTKKKIIIEIF-SE 69
Query: 375 SLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIAK 554
+ + NFL LL D R+ IVT I+ F +Y + ++ LA V S V+L Q I K
Sbjct: 70 KINSSLLNFLKLLADRQRIGIVTSILDRFLEIYRENSNIALATVTSAVELTDDQKGLITK 129
Query: 555 QVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDI 698
++ + G + + + T +DPSL+ GF GSK+ID S+ Q+ +
Sbjct: 130 KIINIAGTEKLELVTKIDPSLIGGFV---ASVGSKVIDASLASQIRKL 174
>sp|B1WUI1|ATPD_CYAA5 ATP synthase subunit delta OS=Cyanothece sp. (strain ATCC
51142) GN=atpH PE=3 SV=1
Length = 185
Score = 89 bits (219), Expect = 4e-017
Identities = 54/183 (29%), Positives = 99/183 (54%), Gaps = 5/183 (2%)
Frame = +3
Query: 165 GARMSATAAGSYAMALADVAKRNDTLELTSADVEKLENVFSD-PQVLNFFANPTVEVEKK 341
G+ S A YA AL +A+ D D + ++ + ++ F ++P ++ E K
Sbjct: 3 GSLFSTEIAEPYAQALMSLAQSRDITRSIGEDCRSILDILEESAELREFISSPIIKDEDK 62
Query: 342 RLVIDEIVKASSLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVK 521
R V++ ++ + + + NFL LLVD R+ + I +++ + K+T+T LAEV + +
Sbjct: 63 RGVLNRLL-GNDIHHYLRNFLMLLVDKRRIVFLQAICEQYLALLRKLTNTVLAEVTASTE 121
Query: 522 LEPPQLAQIAKQVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIA 701
L Q + +++ LTGA++V +KT +DP L+ G I+ GS++ D S++ QL I+
Sbjct: 122 LSEGQRRDVIDKIKALTGAESVELKTDIDPDLIGGVIIKV---GSQVFDASLRGQLRRIS 178
Query: 702 AQL 710
L
Sbjct: 179 ISL 181
>sp|Q40610|ATPD_OCHNE ATP synthase subunit delta, chloroplastic OS=Ochrosphaera
neapolitana GN=atpD PE=3 SV=1
Length = 179
Score = 88 bits (216), Expect = 8e-017
Identities = 55/175 (31%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
Frame = +3
Query: 180 ATAAGSYAMALADVAKRNDTLELTSADVEKLENVFSDPQVL-NFFANPTVEVEKKRLVID 356
A A +YA AL ++A N +L+ T+ D+ + ++ L F NP + E+K+ V+
Sbjct: 4 AKIADAYAEALLELANSNKSLKETTNDMNIVSQFLANSSDLKKFLGNPLITRERKKNVLK 63
Query: 357 EIVKASSLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQ 536
+++ + + + NFL LLV+ RV + I ++F + K ++A+V S V L Q
Sbjct: 64 DVL-GEQISSVSLNFLMLLVNRGRVAFLDKIAQKFLELSYKQDAIEIAKVTSSVALSAQQ 122
Query: 537 LAQIAKQVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIA 701
++A +++ +TGAK +++ ++P L+ GFT+ + GSKLID S++ QL+ I+
Sbjct: 123 QKELAGKLKLITGAKKIKLALRVEPKLIGGFTV---EIGSKLIDTSIRGQLKKIS 174
>sp|A3PEU0|ATPD_PROM0 ATP synthase subunit delta OS=Prochlorococcus marinus
(strain MIT 9301) GN=atpH PE=3 SV=1
Length = 180
Score = 88 bits (216), Expect = 8e-017
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 5/168 (2%)
Frame = +3
Query: 198 YAMALADVAKRN-DTLELTSADVEKLENVFSDPQVLNFFANPTVEVEKKRLVIDEIVKAS 374
YA AL V N T E+ S + LE + + P++ ++P +E + K+ +I+EI +
Sbjct: 11 YAEALLQVVNENSQTEEMVSEVKQLLELINNSPELEKALSSPILETDAKKKIINEIF-SK 69
Query: 375 SLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIAK 554
+ + NFL LL D R+ I+T I+ F +Y + ++ LA V S V+L Q I K
Sbjct: 70 KVNSSLLNFLKLLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELTDEQKGLITK 129
Query: 555 QVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDI 698
++ + G + + + T +DPSL+ GF GSK+ID S+ Q+ +
Sbjct: 130 KIINIAGTEKLELVTKIDPSLIGGFV---ASVGSKVIDASLASQIRKL 174
>sp|Q8DLP4|ATPD_THEEB ATP synthase subunit delta OS=Thermosynechococcus
elongatus (strain BP-1) GN=atpH PE=3 SV=1
Length = 185
Score = 88 bits (216), Expect = 8e-017
Identities = 52/172 (30%), Positives = 95/172 (55%), Gaps = 5/172 (2%)
Frame = +3
Query: 198 YAMALADVAKRNDTLELTSADVE-KLENVFSDPQVLNFFANPTVEVEKKRLVIDEIVKAS 374
YA AL +A+ ++ ++ D + +E V S ++ F ANP ++ E K+ V+ ++
Sbjct: 14 YAEALLSLAQTHNLIDQFQQDTQLMVELVASSGELQQFLANPLIKPEAKKNVLRQLT-VD 72
Query: 375 SLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIAK 554
+ + NFL LLVD R++ ++ I + + + K+ + LAEV S V+L Q + +
Sbjct: 73 KVHGYFLNFLMLLVDRRRINFLSSICEHYRALVRKLRNVALAEVTSAVELNDDQRRAVVE 132
Query: 555 QVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIAAQL 710
+V+ +TGA +V + T DP L+ G I+ GS++ D S++ QL ++ L
Sbjct: 133 KVKTMTGAADVELVTACDPELIGGVVIKV---GSQIFDASLRGQLRRLSVTL 181
>sp|B7K5I7|ATPD_CYAP8 ATP synthase subunit delta OS=Cyanothece sp. (strain PCC
8801) GN=atpH PE=3 SV=1
Length = 185
Score = 87 bits (215), Expect = 1e-016
Identities = 54/183 (29%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
Frame = +3
Query: 165 GARMSATAAGSYAMALADVAKRNDTLELTSADVEKLENVFSDPQVL-NFFANPTVEVEKK 341
G+ +S+ A YA AL VA+ ++ E D L + + + L +P ++ K
Sbjct: 3 GSLISSAIAEPYAQALMSVAQAHNLTEQFGDDCRSLIAILEESRDLQGLILSPVIKETDK 62
Query: 342 RLVIDEIVKASSLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVK 521
+ V+ ++ + NF+ LLVD R+ + +I +++ + K+T+T LAEV S +
Sbjct: 63 KAVLRRMM-GDRTSPYLLNFIMLLVDKRRIIFLEEICQQYLTLLRKLTNTVLAEVTSAKE 121
Query: 522 LEPPQLAQIAKQVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIA 701
L Q + +++ LTGA+ V +KT +DP L+ G TI+ GS++ D S++ QL ++
Sbjct: 122 LSDRQCRAVTDKIKDLTGAQGVEIKTSVDPDLIGGVTIKV---GSQVFDASLRGQLRRVS 178
Query: 702 AQL 710
L
Sbjct: 179 LSL 181
>sp|A2BT26|ATPD_PROMS ATP synthase subunit delta OS=Prochlorococcus marinus
(strain AS9601) GN=atpH PE=3 SV=1
Length = 180
Score = 87 bits (213), Expect = 2e-016
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
Frame = +3
Query: 198 YAMALADVAKRN-DTLELTSADVEKLENVFSDPQVLNFFANPTVEVEKKRLVIDEIVKAS 374
YA AL V N T E+ S + LE V P++ ++P +E + K+ +I EI ++
Sbjct: 11 YAEALLQVVNENSQTEEMVSEVKQLLELVNDSPELEKALSSPILETDAKKKIIIEIF-SN 69
Query: 375 SLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIAK 554
+ + NFL LL D R+ I+T I+ F +Y + ++ LA V S V+L Q I K
Sbjct: 70 KVNSSLLNFLKLLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELTDEQKGLITK 129
Query: 555 QVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDI 698
++ + G + + + T +DPSL+ GF GSK+ID S+ Q+ +
Sbjct: 130 KIINIAGTEKLELVTKIDPSLIGGFV---ASVGSKVIDASLASQIRKL 174
>sp|A8G6V2|ATPD_PROM2 ATP synthase subunit delta OS=Prochlorococcus marinus
(strain MIT 9215) GN=atpH PE=3 SV=1
Length = 180
Score = 86 bits (211), Expect = 3e-016
Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 5/168 (2%)
Frame = +3
Query: 198 YAMALADVAKRN-DTLELTSADVEKLENVFSDPQVLNFFANPTVEVEKKRLVIDEIVKAS 374
YA AL V N T E+ S + LE + P++ ++P +E + K+ +I EI ++
Sbjct: 11 YAEALLQVVNENLQTEEMVSEVKQLLELINDSPELEKALSSPILETDAKKKIIIEIF-SN 69
Query: 375 SLQTHTSNFLNLLVDANRVDIVTDIVKEFEIVYNKITDTQLAEVRSVVKLEPPQLAQIAK 554
+ + NFL LL D R+ I+T I++ F +Y + ++ LA V S V+L Q I +
Sbjct: 70 KVNSSLMNFLKLLADRQRIGILTSILERFLEIYRENSNIALATVTSAVELTDEQKGLITQ 129
Query: 555 QVQKLTGAKNVRVKTVLDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDI 698
++ + G + + + T +DPSL+ GF GSK+ID S+ Q+ +
Sbjct: 130 KIINIAGTEKLELVTKIDPSLIGGFV---ASVGSKVIDASLASQIRKL 174
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,378,909,851
Number of Sequences: 518415
Number of Extensions: 78378909851
Number of Successful Extensions: 523441567
Number of sequences better than 0.0: 0
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