BLASTX 7.6.2
Query= UN18992 /QuerySize=1218
(1217 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P46087|NOP2_HUMAN Putative ribosomal RNA methyltransferase NO... 352 3e-096
sp|Q922K7|NOP2_MOUSE Putative ribosomal RNA methyltransferase NO... 346 3e-094
sp|O94268|NOP2_SCHPO Putative ribosomal RNA methyltransferase no... 335 4e-091
sp|P40991|NOP2_YEAST Putative ribosomal RNA methyltransferase No... 317 1e-085
sp|Q60343|Y026_METJA Putative methyltransferase MJ0026 OS=Methan... 155 7e-037
sp|Q8D9F3|RSMF_VIBVU Ribosomal RNA small subunit methyltransfera... 136 5e-031
sp|Q7MKY6|RSMF_VIBVY Ribosomal RNA small subunit methyltransfera... 136 5e-031
sp|A4WBJ4|RSMF_ENT38 Ribosomal RNA small subunit methyltransfera... 134 2e-030
sp|A6TB06|RSMF_KLEP7 Ribosomal RNA small subunit methyltransfera... 134 2e-030
sp|A8AFL6|RSMF_CITK8 Ribosomal RNA small subunit methyltransfera... 133 3e-030
sp|A9MNH4|RSMF_SALAR Ribosomal RNA small subunit methyltransfera... 132 8e-030
sp|B7NS84|RSMF_ECO7I Ribosomal RNA small subunit methyltransfera... 131 1e-029
sp|B5XQ35|RSMF_KLEP3 Ribosomal RNA small subunit methyltransfera... 131 1e-029
sp|Q8XCL9|RSMF_ECO57 Ribosomal RNA small subunit methyltransfera... 131 1e-029
sp|B5YQX9|RSMF_ECO5E Ribosomal RNA small subunit methyltransfera... 131 1e-029
sp|Q87PA5|RSMF_VIBPA Ribosomal RNA small subunit methyltransfera... 131 2e-029
sp|B2VJ83|RSMF_ERWT9 Ribosomal RNA small subunit methyltransfera... 130 3e-029
sp|B5F3P3|RSMF_SALA4 Ribosomal RNA small subunit methyltransfera... 129 4e-029
sp|A7MKH5|RSMF_ENTS8 Ribosomal RNA small subunit methyltransfera... 127 2e-028
sp|A1S788|RSMF_SHEAM Ribosomal RNA small subunit methyltransfera... 126 4e-028
>sp|P46087|NOP2_HUMAN Putative ribosomal RNA methyltransferase NOP2 OS=Homo
sapiens GN=NOP2 PE=1 SV=2
Length = 812
Score = 352 bits (903), Expect = 3e-096
Identities = 186/344 (54%), Positives = 240/344 (69%), Gaps = 5/344 (1%)
Frame = +1
Query: 4 PEYLAGYYMLQGASSFLPVMAPAPRENERIVDVAAAPGGKTTYIAALMKNTGLIFANEMK 183
PEYLAG+YMLQGASS LPVMA AP+E+ERI+D+ APGGKT+Y+A LMKNTG+I AN+
Sbjct: 359 PEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDAN 418
Query: 184 VPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESVK 363
RLKS+ NLHR+GVTNT++ +YDGR+ PKV+G DRVLLDAPCSGTGVISKD +VK
Sbjct: 419 AERLKSVVGNLHRLGVTNTIISHYDGRQFPKVVG--GFDRVLLDAPCSGTGVISKDPAVK 476
Query: 364 TSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKKRN 543
T+K +DI R AHLQK+LLL+AID V+ATSKTGGY+VY TCS+ V ENE V+DYALKKRN
Sbjct: 477 TNKDEKDILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRN 536
Query: 544 VQLVKTGLDFGQDGYSKFREHRFHPSLKQTKRFYPHVHNMDGFFVAKLKKMSNMKQTSED 723
V+LV TGLDFGQ+G+++FRE RFHPSL+ T+RFYPH HNMDGFF+AK KK SN S+
Sbjct: 537 VRLVPTGLDFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQT 596
Query: 724 DDEAVETVEQADVSSDDDDDEAEAM-EEMEKVSVPSKQPKETKENKERLAKSKEKKGKKD 900
+ T D+ E + + K + +KQ + +++ ++ + K K
Sbjct: 597 GNSETATPTNVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKG 656
Query: 901 AKSKSKNVERKPKKKRSDWKKEIAQ--AREEKRRAMREKSKEKQ 1026
A S+ V K + S ++ +Q + E R + K KQ
Sbjct: 657 ADSELSTVPSVTKTQASSSFQDSSQPAGKAEGIREPKVTGKLKQ 700
>sp|Q922K7|NOP2_MOUSE Putative ribosomal RNA methyltransferase NOP2 OS=Mus
musculus GN=Nop2 PE=2 SV=1
Length = 793
Score = 346 bits (885), Expect = 3e-094
Identities = 181/344 (52%), Positives = 235/344 (68%), Gaps = 10/344 (2%)
Frame = +1
Query: 4 PEYLAGYYMLQGASSFLPVMAPAPRENERIVDVAAAPGGKTTYIAALMKNTGLIFANEMK 183
PEYLAG+YMLQGASS LPVMA AP+E+ERI+D+ APGGKT+YIA LMKNTG+I AN+
Sbjct: 344 PEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDAN 403
Query: 184 VPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESVK 363
RLKS+ NLHR+GVTNT++ +YDGR+ PKV+G DRVLLDAPCSGTGVISKD +VK
Sbjct: 404 ADRLKSVVGNLHRLGVTNTIISHYDGRQFPKVVG--GFDRVLLDAPCSGTGVISKDPAVK 461
Query: 364 TSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKKRN 543
T+K +DI+R AHLQK+LLL+AID V+A SKTGGY+VY TCS+ V ENE V+DYALKKRN
Sbjct: 462 TNKDEKDIQRCAHLQKELLLSAIDSVNAASKTGGYLVYCTCSITVEENEWVVDYALKKRN 521
Query: 544 VQLVKTGLDFGQDGYSKFREHRFHPSLKQTKRFYPHVHNMDGFFVAKLKKMSNMKQTSED 723
V+LV TGLDFGQ+G+++F+ RFHP+L+ T+RFYPH HNMDGFF+AK KK SN
Sbjct: 522 VRLVPTGLDFGQEGFTRFQARRFHPTLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQPHA 581
Query: 724 DDEAVETVEQADVSSDDDDDEAEAMEEMEKVSVPSKQPKETKENKERLAKSKEKKGKKDA 903
+ A T + D+ D E + + ++ + K+ R SK+ K +
Sbjct: 582 GNSAAATPTEPDLK----DQVTPKSENGSQPTKKARGAVKAKQQLLRQPHSKKPFQKLNG 637
Query: 904 KSKSKNVERKPKKKRSDWKKEIAQ----AREEKRRAMREKSKEK 1023
+K + +P + +Q A +R EK K++
Sbjct: 638 IAKGPGLSTEPSVPDAQVSTRPSQSAGNADVNSKRKRSEKLKQR 681
>sp|O94268|NOP2_SCHPO Putative ribosomal RNA methyltransferase nop2
OS=Schizosaccharomyces pombe GN=SPBP8B7.20c PE=1 SV=1
Length = 608
Score = 335 bits (859), Expect = 4e-091
Identities = 174/297 (58%), Positives = 225/297 (75%), Gaps = 6/297 (2%)
Frame = +1
Query: 4 PEYLAGYYMLQGASSFLPVMAPAPRENERIVDVAAAPGGKTTYIAALMKNTGLIFANEMK 183
PEYLAG+Y+LQ ASSFLPVMA AP+ NERI+D+++APGGK TY+AAL KNTG+IFAN+
Sbjct: 314 PEYLAGHYILQAASSFLPVMALAPQPNERILDMSSAPGGKVTYVAALQKNTGIIFANDSN 373
Query: 184 VPRLKSLTANLHRMGVTNTVVCNYDGRELP-KVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R K+L+AN+HR+GV N +VCNYDGR+ P +V+G DRVLLDAPCSGTGVI KD+SV
Sbjct: 374 KARTKALSANIHRLGVRNAIVCNYDGRKFPNEVIG--GFDRVLLDAPCSGTGVIYKDQSV 431
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKKR 540
KT+KS D +HLQ+QLLL+AID V+A SKTGG+IVYSTCS+ V E+EAVI YALKKR
Sbjct: 432 KTNKSERDFDTLSHLQRQLLLSAIDSVNADSKTGGFIVYSTCSITVDEDEAVIQYALKKR 491
Query: 541 -NVQLVKTGLDFGQDGYSKFREHRFHPSLKQTKRFYPHVHNMDGFFVAKLKKMSNMKQT- 714
NV+LV TGL+FG++G+++FRE RFHPSLK T+R+YPHVHN+DGFFVAKLKK+S+ T
Sbjct: 492 PNVKLVSTGLEFGREGFTRFREKRFHPSLKLTRRYYPHVHNIDGFFVAKLKKISDKIPTV 551
Query: 715 SEDDDEAVETVEQADVSSDDDD-DEAEAMEEMEKVSVPSKQPKETKENKERLAKSKE 882
+ DD T ++ + + D +E +K + + K K ++AK K+
Sbjct: 552 NVADDMKDGTNNDVEIEKNSTEIDNITFNDEADKEIIEQNRRKWLKSKGYKVAKKKD 608
>sp|P40991|NOP2_YEAST Putative ribosomal RNA methyltransferase Nop2
OS=Saccharomyces cerevisiae GN=NOP2 PE=1 SV=1
Length = 618
Score = 317 bits (811), Expect = 1e-085
Identities = 162/301 (53%), Positives = 219/301 (72%), Gaps = 16/301 (5%)
Frame = +1
Query: 4 PEYLAGYYMLQGASSFLPVMAPAPRENERIVDVAAAPGGKTTYIAALMKNTGLIFANEMK 183
PEYLAG+Y+LQ ASSFLPV+A P ENERI+D+AAAPGGKTTYI+A+MKNTG +FAN+
Sbjct: 320 PEYLAGHYILQAASSFLPVIALDPHENERILDMAAAPGGKTTYISAMMKNTGCVFANDAN 379
Query: 184 VPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESVK 363
R KSL AN+HR+G TNT+VCNYD RE PKV+G DR+LLDAPCSGTGVI KD+SVK
Sbjct: 380 KSRTKSLIANIHRLGCTNTIVCNYDAREFPKVIG--GFDRILLDAPCSGTGVIGKDQSVK 437
Query: 364 TSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKKR- 540
S++ +D + HLQKQLLL+AID VD SK GG IVYSTCS+ V E+EAVIDYAL+KR
Sbjct: 438 VSRTEKDFIQIPHLQKQLLLSAIDSVDCNSKHGGVIVYSTCSVAVEEDEAVIDYALRKRP 497
Query: 541 NVQLVKTGLDFGQDGYSKFREHRFHPSLKQTKRFYPHVHNMDGFFVAKLKKM-------- 696
NV+LV TGL G++ ++ +R +FHPS+K +R+YPH +N+DGFFVAK +K+
Sbjct: 498 NVKLVDTGLAIGKEAFTSYRGKKFHPSVKLARRYYPHTYNVDGFFVAKFQKIGPSSFDDN 557
Query: 697 ---SNMKQTSEDDDEAVETVEQADVSSDDDDDEAEAMEEMEKVSVPSK--QPKETKENKE 861
+ K+T+ + E + +D ++ +D+++ + +E+ K ++ K PK + + E
Sbjct: 558 QASAKEKETAARKEALEEGIIHSDFATFEDEEDDKYIEKSVKNNLLKKGVNPKAKRPSNE 617
Query: 862 R 864
+
Sbjct: 618 K 618
>sp|Q60343|Y026_METJA Putative methyltransferase MJ0026 OS=Methanocaldococcus
jannaschii GN=MJ0026 PE=3 SV=1
Length = 274
Score = 155 bits (391), Expect = 7e-037
Identities = 90/187 (48%), Positives = 123/187 (65%), Gaps = 11/187 (5%)
Frame = +1
Query: 4 PEYLAGYYMLQGASSFLPVMAPAPRENERIVDVAAAPGGKTTYIAALMKNTGLIFANEMK 183
PEYL GYYM Q SS +P + PRE++ I+D+ AAPGGKTT++A LMKN G I A E+
Sbjct: 58 PEYLFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEIS 117
Query: 184 VPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSV--DRVLLDAPCSGTGVISKDES 357
R K+L +N++RMGV NT++ N D R+ L + + D++LLDAPCSG + K+ +
Sbjct: 118 KTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRN 177
Query: 358 VKTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKK 537
V S EDIK + QK+L+ ID++ K G +VYSTCS+ V ENE VI Y L+K
Sbjct: 178 V----SEEDIKYCSLRQKELIDIGIDLL----KKDGELVYSTCSMEVEENEEVIKYILQK 229
Query: 538 RN-VQLV 555
RN V+L+
Sbjct: 230 RNDVELI 236
>sp|Q8D9F3|RSMF_VIBVU Ribosomal RNA small subunit methyltransferase F OS=Vibrio
vulnificus GN=rsmF PE=3 SV=1
Length = 472
Score = 136 bits (340), Expect = 5e-031
Identities = 80/172 (46%), Positives = 102/172 (59%), Gaps = 7/172 (4%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMAPAPREN--ERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E++ G + +Q ASS +PV A EN E ++D AAAPG KTT IAALM N G++ ANE
Sbjct: 89 EHMCGLFYIQEASSMMPVSALFLGENQFESVLDTAAAPGSKTTQIAALMNNQGILVANEY 148
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L AN+ R GV N + N+DGR L E S D VLLDAPCSG G + KDE
Sbjct: 149 AASRVKVLHANIERCGVRNAALSNFDGRVFGGWLPE-SFDAVLLDAPCSGEGTVRKDEDA 207
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAV 516
+ S E + A QK L+ +A + K GG +VYSTC+L EN+ V
Sbjct: 208 MKNWSQESVLEIAATQKDLIESAFQAL----KPGGVMVYSTCTLSEEENQQV 255
>sp|Q7MKY6|RSMF_VIBVY Ribosomal RNA small subunit methyltransferase F OS=Vibrio
vulnificus (strain YJ016) GN=rsmF PE=3 SV=2
Length = 472
Score = 136 bits (340), Expect = 5e-031
Identities = 80/172 (46%), Positives = 102/172 (59%), Gaps = 7/172 (4%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMAPAPREN--ERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E++ G + +Q ASS +PV A EN E ++D AAAPG KTT IAALM N G++ ANE
Sbjct: 89 EHMCGLFYIQEASSMMPVSALFLGENQFESVLDTAAAPGSKTTQIAALMNNQGILVANEY 148
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L AN+ R GV N + N+DGR L E S D VLLDAPCSG G + KDE
Sbjct: 149 AASRVKVLHANIERCGVRNAALSNFDGRVFGGWLPE-SFDAVLLDAPCSGEGTVRKDEDA 207
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAV 516
+ S E + A QK L+ +A + K GG +VYSTC+L EN+ V
Sbjct: 208 MKNWSQESVLEIAATQKDLIESAFQAL----KPGGVMVYSTCTLSEEENQQV 255
>sp|A4WBJ4|RSMF_ENT38 Ribosomal RNA small subunit methyltransferase F
OS=Enterobacter sp. (strain 638) GN=rsmF PE=3 SV=1
Length = 480
Score = 134 bits (336), Expect = 2e-030
Identities = 83/186 (44%), Positives = 112/186 (60%), Gaps = 8/186 (4%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMAPAPREN--ERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E+L+G + +Q ASS LPV A +N ER++DVAAAPG KTT IAA M N G+I ANE
Sbjct: 91 EHLSGLFYIQEASSMLPVTALFAEDNQPERVMDVAAAPGSKTTQIAARMGNRGVILANEF 150
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L AN+ R G++N + ++DGR L E S D +LLDAPCSG GV+ KD
Sbjct: 151 SASRVKVLHANISRCGISNVALTHFDGRVFGAALPE-SFDAILLDAPCSGEGVVRKDPDA 209
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKKR 540
+ S+ A Q++L ID + GG +VYSTC+L ENE+V + LK++
Sbjct: 210 LKNWSVASNLEIAATQREL----IDSAFHALRPGGMLVYSTCTLNRDENESVCLW-LKEQ 264
Query: 541 NVQLVK 558
Q V+
Sbjct: 265 YPQAVE 270
>sp|A6TB06|RSMF_KLEP7 Ribosomal RNA small subunit methyltransferase F
OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
78578) GN=rsmF PE=3 SV=2
Length = 477
Score = 134 bits (336), Expect = 2e-030
Identities = 80/179 (44%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMA--PAPRENERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E+L+G + +Q ASS LPV A R+ ER++DVAAAPG KTT IAA M N G I ANE
Sbjct: 91 EHLSGLFYIQEASSMLPVAALFADNRQPERVMDVAAAPGSKTTQIAARMGNAGGILANEF 150
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L AN+ R G++N + ++DGR L E + D +LLDAPCSG GV+ KD
Sbjct: 151 SASRVKVLHANISRCGISNVALTHFDGRVFGAALPE-TFDAILLDAPCSGEGVVRKDADA 209
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKK 537
+ S E A Q++L ID + GG +VYSTC+L EN++VI++ L +
Sbjct: 210 LKNWSPESNLDIAATQREL----IDSAFHALRPGGTLVYSTCTLNREENQSVIEWLLSR 264
>sp|A8AFL6|RSMF_CITK8 Ribosomal RNA small subunit methyltransferase F
OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
GN=rsmF PE=3 SV=1
Length = 479
Score = 133 bits (333), Expect = 3e-030
Identities = 80/172 (46%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMAPAPREN--ERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E+L+G + +Q ASS LPV A N ERI+DVAAAPG KTT IAA M N G I ANE
Sbjct: 91 EHLSGLFYIQEASSMLPVAALFAEGNTPERIMDVAAAPGSKTTQIAARMNNQGAILANEF 150
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L AN+ R G++N + ++DGR L E + D +LLDAPCSG GV+ KD
Sbjct: 151 SASRVKVLHANISRCGISNVALTHFDGRVFGAALPE-TFDAILLDAPCSGEGVVRKDPDA 209
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAV 516
+ S+E A Q++L ID + GG +VYSTC+L ENE+V
Sbjct: 210 LKNWSVESNLDIAATQREL----IDSAFHALRPGGTLVYSTCTLNREENESV 257
>sp|A9MNH4|RSMF_SALAR Ribosomal RNA small subunit methyltransferase F
OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
GN=rsmF PE=3 SV=2
Length = 479
Score = 132 bits (330), Expect = 8e-030
Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 7/172 (4%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMAPAPREN--ERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E+L+G + +Q ASS LPV A +N +R++D+AAAPG KTT IAA M N G I ANE
Sbjct: 91 EHLSGLFYIQEASSMLPVAALFADDNHPQRVMDMAAAPGSKTTQIAARMGNHGAILANEF 150
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L ANL R GV NT + ++DGR L E D +LLDAPCSG GV+ KD
Sbjct: 151 SASRVKILHANLCRCGVANTALTHFDGRVFGAALPE-MFDAILLDAPCSGEGVVRKDPDA 209
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAV 516
+ S E A Q++LL +A + + GG +VYSTC+L ENEAV
Sbjct: 210 LKNWSPESNLDIAATQRELLESAFHAL----RPGGTLVYSTCTLNRQENEAV 257
>sp|B7NS84|RSMF_ECO7I Ribosomal RNA small subunit methyltransferase F
OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=rsmF PE=3 SV=1
Length = 479
Score = 131 bits (329), Expect = 1e-029
Identities = 79/172 (45%), Positives = 102/172 (59%), Gaps = 7/172 (4%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMAPAPREN--ERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E+L+G + +Q ASS LPV A N +R++DVAAAPG KTT IAA M N G I ANE
Sbjct: 91 EHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEF 150
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L AN+ R G++N + ++DGR L E D +LLDAPCSG GV+ KD
Sbjct: 151 SASRVKVLHANISRCGISNVALTHFDGRVFGAALPE-MFDAILLDAPCSGEGVVRKDPDA 209
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAV 516
+ S E + A Q++L ID + GG +VYSTC+L ENEAV
Sbjct: 210 LKNWSPESNQEIAATQREL----IDSAFHALRPGGTLVYSTCTLNREENEAV 257
>sp|B5XQ35|RSMF_KLEP3 Ribosomal RNA small subunit methyltransferase F
OS=Klebsiella pneumoniae (strain 342) GN=rsmF PE=3 SV=1
Length = 477
Score = 131 bits (329), Expect = 1e-029
Identities = 80/182 (43%), Positives = 107/182 (58%), Gaps = 13/182 (7%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMA-----PAPRENERIVDVAAAPGGKTTYIAALMKNTGLIFA 171
E+L+G + +Q ASS LPV A P P ER++DVAAAPG KTT IAA M N G I A
Sbjct: 91 EHLSGLFYIQEASSMLPVAALFADNPQP---ERVMDVAAAPGSKTTQIAARMGNAGGILA 147
Query: 172 NEMKVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKD 351
NE R+K L AN+ R G++N + ++DGR L E + D +LLDAPCSG GV+ KD
Sbjct: 148 NEFSASRVKVLHANISRCGISNVALTHFDGRVFGAALPE-AFDAILLDAPCSGEGVVRKD 206
Query: 352 ESVKTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYAL 531
+ S E A Q++L ID + GG +VYSTC+L EN++V+ + L
Sbjct: 207 ADALKNWSPESNLDIAATQREL----IDSAFHALRPGGTLVYSTCTLNREENQSVVQWLL 262
Query: 532 KK 537
+
Sbjct: 263 SR 264
>sp|Q8XCL9|RSMF_ECO57 Ribosomal RNA small subunit methyltransferase F
OS=Escherichia coli O157:H7 GN=rsmF PE=3 SV=2
Length = 479
Score = 131 bits (328), Expect = 1e-029
Identities = 78/172 (45%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMAPAPREN--ERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E+L+G + +Q ASS LPV A N +R++DVAAAPG KTT IAA M N G I ANE
Sbjct: 91 EHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEF 150
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L AN+ R G++N + ++DGR L E D +LLDAPCSG GV+ KD
Sbjct: 151 SASRVKVLHANISRCGISNVALTHFDGRVFGAALPE-MFDAILLDAPCSGEGVVRKDPDA 209
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAV 516
+ S E + A Q++L ID ++GG +VYSTC+L ENE+V
Sbjct: 210 LKNWSPESNQEIAATQREL----IDSAFHALRSGGTLVYSTCTLNREENESV 257
>sp|B5YQX9|RSMF_ECO5E Ribosomal RNA small subunit methyltransferase F
OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=rsmF PE=3 SV=1
Length = 479
Score = 131 bits (328), Expect = 1e-029
Identities = 78/172 (45%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMAPAPREN--ERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E+L+G + +Q ASS LPV A N +R++DVAAAPG KTT IAA M N G I ANE
Sbjct: 91 EHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEF 150
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L AN+ R G++N + ++DGR L E D +LLDAPCSG GV+ KD
Sbjct: 151 SASRVKVLHANISRCGISNVALTHFDGRVFGAALPE-MFDAILLDAPCSGEGVVRKDPDA 209
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAV 516
+ S E + A Q++L ID ++GG +VYSTC+L ENE+V
Sbjct: 210 LKNWSPESNQEIAATQREL----IDSAFHALRSGGTLVYSTCTLNREENESV 257
>sp|Q87PA5|RSMF_VIBPA Ribosomal RNA small subunit methyltransferase F OS=Vibrio
parahaemolyticus GN=rsmF PE=3 SV=1
Length = 478
Score = 131 bits (327), Expect = 2e-029
Identities = 75/172 (43%), Positives = 102/172 (59%), Gaps = 7/172 (4%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMAPAPREN--ERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E+++G + +Q ASS +PV A + + ++D AAAPG KTT IAALMKN G++ ANE
Sbjct: 89 EHMSGLFYIQEASSMMPVSALFMNDESYDAVLDTAAAPGSKTTQIAALMKNEGVLVANEY 148
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L AN+ R GV N + N+DGR L E+ D VLLDAPCSG G + KDE
Sbjct: 149 AASRVKVLHANIERCGVRNAALSNFDGRVFGGWLPEQ-FDAVLLDAPCSGEGTVRKDEDA 207
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAV 516
+ + + A QK L+ +A + K GG +VYSTC+L EN+ V
Sbjct: 208 MKNWTQASVLEIADTQKDLIESAFHAL----KPGGVLVYSTCTLSTEENQQV 255
>sp|B2VJ83|RSMF_ERWT9 Ribosomal RNA small subunit methyltransferase F OS=Erwinia
tasmaniensis (strain DSM 17950 / Et1/99) GN=rsmF PE=3 SV=1
Length = 478
Score = 130 bits (325), Expect = 3e-029
Identities = 79/179 (44%), Positives = 106/179 (59%), Gaps = 7/179 (3%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMA--PAPRENERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E+LAG + +Q ASS LPV A +R++D+AAAPG KTT IAA M N G I ANE
Sbjct: 92 EHLAGLFYIQEASSMLPVSALFDGGDMPQRVMDMAAAPGSKTTQIAAHMGNRGAILANEY 151
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L ANL R GV+NT + ++DGR L E D VLLDAPCSG GV+ KD
Sbjct: 152 SASRVKVLHANLSRCGVSNTAMTHFDGRVFGPALPE-CFDAVLLDAPCSGEGVVRKDADA 210
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKK 537
+ S + A Q+ L+ +A + + GG +VYSTC+L EN+ V++ L++
Sbjct: 211 LRNWSQSSTEEIAATQQALINSAFHAL----RPGGTLVYSTCTLNTRENQQVVNGLLEQ 265
>sp|B5F3P3|RSMF_SALA4 Ribosomal RNA small subunit methyltransferase F
OS=Salmonella agona (strain SL483) GN=rsmF PE=3 SV=1
Length = 479
Score = 129 bits (324), Expect = 4e-029
Identities = 78/172 (45%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMAPAPREN--ERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E+L+G + +Q ASS LPV A +N +R++D+AAAPG KTT IAA M N G I ANE
Sbjct: 91 EHLSGLFYIQEASSMLPVAALFADDNHPQRVMDMAAAPGSKTTQIAARMGNRGAILANEF 150
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L AN+ R G+ NT + ++DGR L E D +LLDAPCSG GV+ KD
Sbjct: 151 SASRVKVLHANISRCGIANTALTHFDGRVFGAALPE-MFDAILLDAPCSGEGVVRKDPDA 209
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAV 516
+ S E A Q++LL +A + + GG +VYSTC+L ENE V
Sbjct: 210 LKNWSPESNLDIAATQRELLDSAFHAL----RPGGTLVYSTCTLNRQENEEV 257
>sp|A7MKH5|RSMF_ENTS8 Ribosomal RNA small subunit methyltransferase F
OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=rsmF PE=3 SV=2
Length = 480
Score = 127 bits (318), Expect = 2e-028
Identities = 77/179 (43%), Positives = 104/179 (58%), Gaps = 7/179 (3%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLPVMAPAPREN--ERIVDVAAAPGGKTTYIAALMKNTGLIFANEM 180
E+L+G + +Q ASS LPV A N R++DVAAAPG KTT IAALM+N G I ANE
Sbjct: 92 EHLSGQFYIQEASSMLPVAALFADGNTPARVMDVAAAPGSKTTQIAALMQNQGFILANEY 151
Query: 181 KVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDESV 360
R+K L AN+ R G+ N + ++DGR L E+ D +LLDAPCSG GV+ KD
Sbjct: 152 SASRVKVLHANISRCGIHNVGLTHFDGRVFGAALPEQ-FDAILLDAPCSGEGVVRKDPDA 210
Query: 361 KTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKK 537
+ S + + A Q++L ID GG +VYSTC+L EN+ + + L +
Sbjct: 211 LRNWSPQSDQEIAATQREL----IDSAFHALAPGGTLVYSTCTLNREENQETVRWLLAR 265
>sp|A1S788|RSMF_SHEAM Ribosomal RNA small subunit methyltransferase F
OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rsmF PE=3
SV=1
Length = 467
Score = 126 bits (315), Expect = 4e-028
Identities = 80/182 (43%), Positives = 105/182 (57%), Gaps = 12/182 (6%)
Frame = +1
Query: 7 EYLAGYYMLQGASSFLP----VMAPAPRENERIVDVAAAPGGKTTYIAALMKNTGLIFAN 174
E+ G + +Q ASS +P M PR + ++DVA+APG KTT +AALM N GLI AN
Sbjct: 85 EHYQGLFYIQEASSMMPPCALFMDKEPR--QLLLDVASAPGSKTTQLAALMHNQGLIIAN 142
Query: 175 EMKVPRLKSLTANLHRMGVTNTVVCNYDGRELPKVLGEKSVDRVLLDAPCSGTGVISKDE 354
E R K+L ANL RMGV N + +DGR L E ++D + LDAPCSG G + KD
Sbjct: 143 EYSASRTKALHANLQRMGVANVAITQFDGRVFGAHLYE-TLDAIQLDAPCSGEGTVRKDP 201
Query: 355 SVKTSKSLEDIKRFAHLQKQLLLAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALK 534
+ ++I+ A LQ+ L ID K GG +VYSTC+L ENE V + LK
Sbjct: 202 LSLKNWCPDEIEAIAELQRDL----IDSAFQALKPGGVLVYSTCTLNRRENEDVCHF-LK 256
Query: 535 KR 540
+R
Sbjct: 257 ER 258
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,378,909,851
Number of Sequences: 518415
Number of Extensions: 78378909851
Number of Successful Extensions: 523441567
Number of sequences better than 0.0: 0
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