BLASTX 7.6.2
Query= UN19080 /QuerySize=1648
(1647 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15224093|ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arab... 497 4e-138
gi|297825331|ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata... 497 4e-138
gi|59800202|sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed R... 432 1e-118
gi|147843606|emb|CAN79881.1| hypothetical protein VITISV_017990 ... 429 6e-118
gi|225445794|ref|XP_002274521.1| PREDICTED: hypothetical protein... 428 2e-117
gi|297743676|emb|CBI36559.3| unnamed protein product [Vitis vini... 428 2e-117
gi|88933967|sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed R... 425 2e-116
gi|62750825|emb|CAC80139.1| DNA-dependent RNA polymerase [Spinac... 423 8e-116
gi|224143911|ref|XP_002325119.1| predicted protein [Populus tric... 420 5e-115
gi|224088334|ref|XP_002308414.1| predicted protein [Populus tric... 413 6e-113
gi|308026130|emb|CBL69150.1| RNA polymerase [Nuphar advena] 408 1e-111
gi|88933965|sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed R... 407 3e-111
gi|21425669|emb|CAC95022.1| mitochondrial RNA polymerase [Nicoti... 407 3e-111
gi|21425637|emb|CAC82574.2| phage-type RNA polymerase [Nicotiana... 407 3e-111
gi|15823750|dbj|BAB69063.1| T7 bacteriophage-type single subunit... 404 2e-110
gi|21425663|emb|CAC95019.1| mitochondrial RNA polymerase [Nicoti... 404 2e-110
gi|34925359|sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed R... 404 2e-110
gi|225451858|ref|XP_002278535.1| PREDICTED: hypothetical protein... 404 3e-110
gi|242046328|ref|XP_002461035.1| hypothetical protein SORBIDRAFT... 403 8e-110
gi|17221593|dbj|BAB78464.1| T7 bacteriophage-type single subunit... 402 1e-109
>gi|15224093|ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis
thaliana]
Length = 993
Score = 497 bits (1277), Expect = 4e-138
Identities = 245/254 (96%), Positives = 250/254 (98%)
Frame = +3
Query: 432 EEGSNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIS 611
++ S+KDPESNPTAALAKILI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVI+
Sbjct: 740 KKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIT 799
Query: 612 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQ 791
DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRW TPLGLPVVQ
Sbjct: 800 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQ 859
Query: 792 PYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGL 971
PYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGL
Sbjct: 860 PYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGL 919
Query: 972 NFAGVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGD 1151
NFAGVHDSYWTHACDVDTMNRILREKFVELY+TPILEDLLQSFQESYPNLVFPPVPKRGD
Sbjct: 920 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGD 979
Query: 1152 FDLKEVLKSHYFFN 1193
FDLKEVLKS YFFN
Sbjct: 980 FDLKEVLKSQYFFN 993
>gi|297825331|ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp.
lyrata]
Length = 990
Score = 497 bits (1277), Expect = 4e-138
Identities = 245/254 (96%), Positives = 250/254 (98%)
Frame = +3
Query: 432 EEGSNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIS 611
++ S+KDPESNPTAALAKILI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVI+
Sbjct: 737 KKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIT 796
Query: 612 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQ 791
DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRW TPLGLPVVQ
Sbjct: 797 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQ 856
Query: 792 PYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGL 971
PYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGL
Sbjct: 857 PYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGL 916
Query: 972 NFAGVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGD 1151
NFAGVHDSYWTHACDVDTMNRILREKFVELY+TPILEDLLQSFQESYPNLVFPPVPKRGD
Sbjct: 917 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGD 976
Query: 1152 FDLKEVLKSHYFFN 1193
FDLKEVLKS YFFN
Sbjct: 977 FDLKEVLKSQYFFN 990
>gi|59800202|sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase
3, chloroplastic; AltName: Full=NsRpoT-C; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3; Flags: Precursor
Length = 977
Score = 432 bits (1109), Expect = 1e-118
Identities = 207/251 (82%), Positives = 233/251 (92%)
Frame = +3
Query: 441 SNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDER 620
S KDP ++P A LAK+LI+QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG+I D+R
Sbjct: 727 SIKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDR 786
Query: 621 MLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYC 800
+LF A+CY+AKVTLAALGE+F+AAR M+WLGDCAK+IAS+N PVRWTTPLGLPVVQPY
Sbjct: 787 LLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYF 846
Query: 801 RSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFA 980
+++RH+IRTSLQVLALQREG+TV+VRKQRTAFPPNFVHSLDG+HMMMTAVACR+AGL FA
Sbjct: 847 KTQRHVIRTSLQVLALQREGDTVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFA 906
Query: 981 GVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDL 1160
GVHDS+WTHACDVD MNRILREKFVELYS PILEDLL+SFQ SYP L FPP+PKRGDFDL
Sbjct: 907 GVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESFQNSYPALTFPPLPKRGDFDL 966
Query: 1161 KEVLKSHYFFN 1193
EVL+S YFFN
Sbjct: 967 VEVLESPYFFN 977
>gi|147843606|emb|CAN79881.1| hypothetical protein VITISV_017990 [Vitis
vinifera]
Length = 305
Score = 429 bits (1103), Expect = 6e-118
Identities = 205/251 (81%), Positives = 233/251 (92%)
Frame = +3
Query: 441 SNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDER 620
SNKDP ++P A LAK+LI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL EKG+I+DER
Sbjct: 55 SNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDER 114
Query: 621 MLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYC 800
+LF AACY+AKVTLAALGEIF+AAR IM+WLG+CAK+IAS+N PV+WTTPLGLPV+QPYC
Sbjct: 115 LLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYC 174
Query: 801 RSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFA 980
+SERHLIRTSLQVLALQREG+ V +RKQRTAFPPNFVHSLDG+HMMMTAVACR+AGL FA
Sbjct: 175 KSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFA 234
Query: 981 GVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDL 1160
GVHDS+WTHACDVD MNRILREKFVELYS PILE+LL+SFQ S+P L FPP+P RG+FDL
Sbjct: 235 GVHDSFWTHACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDL 294
Query: 1161 KEVLKSHYFFN 1193
+EVL+S YFFN
Sbjct: 295 REVLESPYFFN 305
>gi|225445794|ref|XP_002274521.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 979
Score = 428 bits (1099), Expect = 2e-117
Identities = 204/251 (81%), Positives = 233/251 (92%)
Frame = +3
Query: 441 SNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDER 620
SNKDP ++P A LAK+LI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL EKG+I+DER
Sbjct: 729 SNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDER 788
Query: 621 MLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYC 800
+LF AACY+AKVTLAALGEIF+AAR IM+WLG+CAK+IAS+N PV+WTTPLGLPV+QPYC
Sbjct: 789 LLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYC 848
Query: 801 RSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFA 980
+SERHLIRTSLQVLALQREG+ V +RKQRTAFPPNFVHSLDG+HMMMTAVACR+AGL FA
Sbjct: 849 KSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFA 908
Query: 981 GVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDL 1160
GVHDS+WTHACDVD MN+ILREKFVELYS PILE+LL+SFQ S+P L FPP+P RG+FDL
Sbjct: 909 GVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDL 968
Query: 1161 KEVLKSHYFFN 1193
+EVL+S YFFN
Sbjct: 969 REVLESPYFFN 979
>gi|297743676|emb|CBI36559.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 428 bits (1099), Expect = 2e-117
Identities = 204/251 (81%), Positives = 233/251 (92%)
Frame = +3
Query: 441 SNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDER 620
SNKDP ++P A LAK+LI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL EKG+I+DER
Sbjct: 558 SNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDER 617
Query: 621 MLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYC 800
+LF AACY+AKVTLAALGEIF+AAR IM+WLG+CAK+IAS+N PV+WTTPLGLPV+QPYC
Sbjct: 618 LLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYC 677
Query: 801 RSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFA 980
+SERHLIRTSLQVLALQREG+ V +RKQRTAFPPNFVHSLDG+HMMMTAVACR+AGL FA
Sbjct: 678 KSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFA 737
Query: 981 GVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDL 1160
GVHDS+WTHACDVD MN+ILREKFVELYS PILE+LL+SFQ S+P L FPP+P RG+FDL
Sbjct: 738 GVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDL 797
Query: 1161 KEVLKSHYFFN 1193
+EVL+S YFFN
Sbjct: 798 REVLESPYFFN 808
>gi|88933967|sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase
3B, chloroplastic; AltName: Full=NictaRpoT3-tom; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3B; Flags: Precursor
Length = 977
Score = 425 bits (1091), Expect = 2e-116
Identities = 202/251 (80%), Positives = 232/251 (92%)
Frame = +3
Query: 441 SNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDER 620
S KDP +P A LAK+LI+QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG+I D+R
Sbjct: 727 SIKDPAIDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDR 786
Query: 621 MLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYC 800
+LF A+CY+AKVTLAALGE+F+AAR M+WLGDCAK+IA +N PVRWTTPLGLPVVQPY
Sbjct: 787 LLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIALENQPVRWTTPLGLPVVQPYF 846
Query: 801 RSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFA 980
+++RH+IRTSLQ+LALQREG+ V+VRKQRTAFPPNFVHSLDG+HMMMTAVACR+AGL FA
Sbjct: 847 KTQRHVIRTSLQILALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFA 906
Query: 981 GVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDL 1160
GVHDS+WTHACDVD MNRILREKFVELYS PILEDLL++FQ+SYP L FPP+PKRGDF+L
Sbjct: 907 GVHDSFWTHACDVDQMNRILREKFVELYSLPILEDLLENFQKSYPALTFPPLPKRGDFNL 966
Query: 1161 KEVLKSHYFFN 1193
+EVL+S YFFN
Sbjct: 967 REVLESPYFFN 977
>gi|62750825|emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
Length = 989
Score = 423 bits (1085), Expect = 8e-116
Identities = 197/254 (77%), Positives = 236/254 (92%)
Frame = +3
Query: 432 EEGSNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIS 611
E+ S KDP+++P A LAK+L++QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKGVI+
Sbjct: 736 EKDSRKDPKTDPHAVLAKVLVDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGVIT 795
Query: 612 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQ 791
D+R+LF+AACYSAKVT++ALG++F+AAR IM WLGDCAK+IAS+N PVRWTTPLGLPVVQ
Sbjct: 796 DDRLLFSAACYSAKVTMSALGQLFQAARGIMDWLGDCAKVIASENQPVRWTTPLGLPVVQ 855
Query: 792 PYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGL 971
PYC+S+RHLI+TSLQVLALQ+EG ++V+KQRTAFPPN+VHSLDGTHMMMTAVACR+AGL
Sbjct: 856 PYCKSKRHLIKTSLQVLALQQEGEGIEVKKQRTAFPPNYVHSLDGTHMMMTAVACRDAGL 915
Query: 972 NFAGVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGD 1151
FAGVHDS+WTHACDV+ MN+ILR KFVELY+ PILE+LL+SFQ +YP FPP+P+RGD
Sbjct: 916 QFAGVHDSFWTHACDVEKMNQILRVKFVELYNMPILENLLESFQTAYPASTFPPLPERGD 975
Query: 1152 FDLKEVLKSHYFFN 1193
FDL+EVL+S YFFN
Sbjct: 976 FDLEEVLESPYFFN 989
>gi|224143911|ref|XP_002325119.1| predicted protein [Populus trichocarpa]
Length = 882
Score = 420 bits (1078), Expect = 5e-115
Identities = 202/251 (80%), Positives = 233/251 (92%)
Frame = +3
Query: 441 SNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDER 620
SNKDP +NP A LAKIL++QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG I+D+R
Sbjct: 632 SNKDPATNPHALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDR 691
Query: 621 MLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYC 800
+LF+AACY+AKVTL ALGE+F+AAR IMSWLGDCAKIIAS++ PV+WTTPLGLPVVQPY
Sbjct: 692 LLFSAACYTAKVTLTALGELFQAARDIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYY 751
Query: 801 RSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFA 980
++ERHLI+TSLQ+LALQREG++V VRKQRTAFPPNFVHSLDG+HMMMTAVACR+AGL FA
Sbjct: 752 KTERHLIKTSLQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFA 811
Query: 981 GVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDL 1160
GVHDS+WTHA DVD MNRILREKFVELY+ PILE+LL+ FQ SYP L FPP+P+RG+FDL
Sbjct: 812 GVHDSFWTHATDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTLQFPPLPERGNFDL 871
Query: 1161 KEVLKSHYFFN 1193
++VL+S YFFN
Sbjct: 872 QKVLRSPYFFN 882
>gi|224088334|ref|XP_002308414.1| predicted protein [Populus trichocarpa]
Length = 982
Score = 413 bits (1060), Expect = 6e-113
Identities = 199/251 (79%), Positives = 229/251 (91%)
Frame = +3
Query: 441 SNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDER 620
SNKDP +NP A LAK+LI++VDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG I+D+R
Sbjct: 732 SNKDPATNPHALLAKVLIDEVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDR 791
Query: 621 MLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYC 800
+LF+AACY+AKVTL ALGE+F+AAR IM WLGDCAK+IAS++ PVRWTTPLGLPVVQPY
Sbjct: 792 VLFSAACYAAKVTLTALGELFQAARDIMGWLGDCAKVIASEDQPVRWTTPLGLPVVQPYY 851
Query: 801 RSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFA 980
+++RHLIRTSLQVLALQREG++V VRKQRTAFPPNFVHSLDG+HMMMTAVACR+A L FA
Sbjct: 852 KTQRHLIRTSLQVLALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDADLRFA 911
Query: 981 GVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDL 1160
GVHDS+WTHA D D MNRILREKFVELY+ PILE+LL+ FQ SYP L FP +P+RG+FDL
Sbjct: 912 GVHDSFWTHARDADLMNRILREKFVELYNMPILENLLEDFQTSYPTLKFPSLPERGNFDL 971
Query: 1161 KEVLKSHYFFN 1193
+EVL+S YFFN
Sbjct: 972 QEVLRSPYFFN 982
>gi|308026130|emb|CBL69150.1| RNA polymerase [Nuphar advena]
Length = 985
Score = 408 bits (1048), Expect = 1e-111
Identities = 195/251 (77%), Positives = 229/251 (91%)
Frame = +3
Query: 441 SNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDER 620
S KDP +PT+ LA+ILI+QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+ I+D++
Sbjct: 735 SKKDPAVHPTSLLARILIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDFITDDK 794
Query: 621 MLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYC 800
+LF+AACY+AKVTL+AL E+F+AAR+IMSWLGDCAK+IAS+N PVRWTTPLGLPVVQPY
Sbjct: 795 LLFSAACYAAKVTLSALEEMFQAARSIMSWLGDCAKVIASENEPVRWTTPLGLPVVQPYW 854
Query: 801 RSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFA 980
+ RHL+RTSLQVLALQRE N V V++Q+TAFPPNFVHSLDG+HMMMTAVAC+ AGLNFA
Sbjct: 855 KQSRHLVRTSLQVLALQRESNKVLVKRQKTAFPPNFVHSLDGSHMMMTAVACKLAGLNFA 914
Query: 981 GVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDL 1160
GVHDSYWTHACDVD M+RILR KFVELYS PILE+LL+SFQ S+P LVFPP+P RGDFDL
Sbjct: 915 GVHDSYWTHACDVDDMSRILRLKFVELYSMPILENLLESFQTSFPTLVFPPLPDRGDFDL 974
Query: 1161 KEVLKSHYFFN 1193
+EVL+S YFFN
Sbjct: 975 QEVLESPYFFN 985
>gi|88933965|sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase
1B, mitochondrial; AltName: Full=NictaRpoT1-tom; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 407 bits (1045), Expect = 3e-111
Identities = 191/249 (76%), Positives = 226/249 (90%)
Frame = +3
Query: 447 KDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDERML 626
KDP ++P A++LINQVDRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+GVI D+ L
Sbjct: 754 KDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNEL 813
Query: 627 FAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYCRS 806
FAAACY+AK TL ALGE+FEAAR+IMSWLGDCAKIIA +NHPVRWTTPLGLPVVQPY +
Sbjct: 814 FAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKL 873
Query: 807 ERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGV 986
RHLI+TSLQ+L LQRE + V V++QRTAFPPNFVHSLDG+HMMMTA+AC+E+GL+FAGV
Sbjct: 874 GRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGV 933
Query: 987 HDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKE 1166
HDSYWTHACDVD MN+ILREKFVELY PILE+LL+SFQ+S+P+L FPP+P+RGDFDL+E
Sbjct: 934 HDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLRE 993
Query: 1167 VLKSHYFFN 1193
VL+S YFFN
Sbjct: 994 VLESPYFFN 1002
>gi|21425669|emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
Length = 715
Score = 407 bits (1045), Expect = 3e-111
Identities = 191/249 (76%), Positives = 226/249 (90%)
Frame = +3
Query: 447 KDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDERML 626
KDP ++P A++LINQVDRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+GVI D+ L
Sbjct: 467 KDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNEL 526
Query: 627 FAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYCRS 806
FAAACY+AK TL ALGE+FEAAR+IMSWLGDCAKIIA +NHPVRWTTPLGLPVVQPY +
Sbjct: 527 FAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKL 586
Query: 807 ERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGV 986
RHLI+TSLQ+L LQRE + V V++QRTAFPPNFVHSLDG+HMMMTA+AC+E+GL+FAGV
Sbjct: 587 GRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGV 646
Query: 987 HDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKE 1166
HDSYWTHACDVD MN+ILREKFVELY PILE+LL+SFQ+S+P+L FPP+P+RGDFDL+E
Sbjct: 647 HDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLRE 706
Query: 1167 VLKSHYFFN 1193
VL+S YFFN
Sbjct: 707 VLESPYFFN 715
>gi|21425637|emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 407 bits (1045), Expect = 3e-111
Identities = 191/249 (76%), Positives = 226/249 (90%)
Frame = +3
Query: 447 KDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDERML 626
KDP ++P A++LINQVDRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+GVI D+ L
Sbjct: 754 KDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNEL 813
Query: 627 FAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYCRS 806
FAAACY+AK TL ALGE+FEAAR+IMSWLGDCAKIIA +NHPVRWTTPLGLPVVQPY +
Sbjct: 814 FAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKL 873
Query: 807 ERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGV 986
RHLI+TSLQ+L LQRE + V V++QRTAFPPNFVHSLDG+HMMMTA+AC+E+GL+FAGV
Sbjct: 874 GRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGV 933
Query: 987 HDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKE 1166
HDSYWTHACDVD MN+ILREKFVELY PILE+LL+SFQ+S+P+L FPP+P+RGDFDL+E
Sbjct: 934 HDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLRE 993
Query: 1167 VLKSHYFFN 1193
VL+S YFFN
Sbjct: 994 VLESPYFFN 1002
>gi|15823750|dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1002
Score = 404 bits (1038), Expect = 2e-110
Identities = 191/249 (76%), Positives = 225/249 (90%)
Frame = +3
Query: 447 KDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDERML 626
KDP ++P A++LINQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+GVI D+ L
Sbjct: 754 KDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNEL 813
Query: 627 FAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYCRS 806
FAAACY+AK TL ALGE+FEAAR+IMSWLGDCAKIIA +NHPVRWTTPLGLPVVQPY +
Sbjct: 814 FAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKL 873
Query: 807 ERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGV 986
RHLI+TSLQ+L LQRE + V V++QRTAFPPNFVHSLDG+HMMMTA+AC+E+GL+FAGV
Sbjct: 874 GRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGV 933
Query: 987 HDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKE 1166
HDSYWTHA DVD MN+ILREKFVELY PILE+LL+SFQ+S+P+L FPP+P+RGDFDL+E
Sbjct: 934 HDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLRE 993
Query: 1167 VLKSHYFFN 1193
VL+S YFFN
Sbjct: 994 VLESPYFFN 1002
>gi|21425663|emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 404 bits (1038), Expect = 2e-110
Identities = 191/249 (76%), Positives = 225/249 (90%)
Frame = +3
Query: 447 KDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDERML 626
KDP ++P A++LINQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+GVI D+ L
Sbjct: 754 KDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNEL 813
Query: 627 FAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYCRS 806
FAAACY+AK TL ALGE+FEAAR+IMSWLGDCAKIIA +NHPVRWTTPLGLPVVQPY +
Sbjct: 814 FAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKL 873
Query: 807 ERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGV 986
RHLI+TSLQ+L LQRE + V V++QRTAFPPNFVHSLDG+HMMMTA+AC+E+GL+FAGV
Sbjct: 874 GRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGV 933
Query: 987 HDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKE 1166
HDSYWTHA DVD MN+ILREKFVELY PILE+LL+SFQ+S+P+L FPP+P+RGDFDL+E
Sbjct: 934 HDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLRE 993
Query: 1167 VLKSHYFFN 1193
VL+S YFFN
Sbjct: 994 VLESPYFFN 1002
>gi|34925359|sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase
1, mitochondrial; AltName: Full=NsRpoT-A; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1; Flags: Precursor
Length = 1002
Score = 404 bits (1038), Expect = 2e-110
Identities = 191/249 (76%), Positives = 225/249 (90%)
Frame = +3
Query: 447 KDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDERML 626
KDP ++P A++LINQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+GVI D+ L
Sbjct: 754 KDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNEL 813
Query: 627 FAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYCRS 806
FAAACY+AK TL ALGE+FEAAR+IMSWLGDCAKIIA +NHPVRWTTPLGLPVVQPY +
Sbjct: 814 FAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKL 873
Query: 807 ERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGV 986
RHLI+TSLQ+L LQRE + V V++QRTAFPPNFVHSLDG+HMMMTA+AC+E+GL+FAGV
Sbjct: 874 GRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGV 933
Query: 987 HDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKE 1166
HDSYWTHA DVD MN+ILREKFVELY PILE+LL+SFQ+S+P+L FPP+P+RGDFDL+E
Sbjct: 934 HDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLRE 993
Query: 1167 VLKSHYFFN 1193
VL+S YFFN
Sbjct: 994 VLESPYFFN 1002
>gi|225451858|ref|XP_002278535.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 1035
Score = 404 bits (1037), Expect = 3e-110
Identities = 192/251 (76%), Positives = 225/251 (89%)
Frame = +3
Query: 441 SNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDER 620
+ KDP P A A+ILINQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+ I+D+
Sbjct: 785 AEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDV 844
Query: 621 MLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYC 800
LF AACY+AK+TL ALGE+F+AAR+IMSWLGDCAKIIAS+N PVRWTTPLGLPVVQPY
Sbjct: 845 ELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYR 904
Query: 801 RSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFA 980
+ RHLI+TSLQVL LQRE T+ V++QRTAFPPNFVHSLDG+HMMMTA+AC++AGLNFA
Sbjct: 905 KLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFA 964
Query: 981 GVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDL 1160
GVHDSYWTHACDVD MNR+LREKFV+LY TPILE+LL+SFQ+S+P L FPP+P+RGDFDL
Sbjct: 965 GVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDL 1024
Query: 1161 KEVLKSHYFFN 1193
+EVL+S YFFN
Sbjct: 1025 REVLESPYFFN 1035
>gi|242046328|ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520
[Sorghum bicolor]
Length = 976
Score = 403 bits (1033), Expect = 8e-110
Identities = 190/251 (75%), Positives = 224/251 (89%)
Frame = +3
Query: 441 SNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDER 620
+ KDP +P A A+++++QVDRKLVKQTVMTSVYGVTYVGAR+QIKRRL+E+GVI DE
Sbjct: 726 AQKDPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEA 785
Query: 621 MLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYC 800
LF A+CY+AKVTL ALGE+F+AAR IM+WLGDCAK+IA +N PVRWTTPLGLPVVQPY
Sbjct: 786 ELFGASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYR 845
Query: 801 RSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFA 980
+ RHLI+TSLQVL LQRE + V V++QRTAFPPNFVHSLDG+HMMMTAVAC+ GLNFA
Sbjct: 846 KLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFA 905
Query: 981 GVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDL 1160
GVHDSYWTHACDVDTMN+ILREKFVELY TPILE+LL+SF++S+P L FPP+P+RGDFD+
Sbjct: 906 GVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDM 965
Query: 1161 KEVLKSHYFFN 1193
KEVL+S YFFN
Sbjct: 966 KEVLESPYFFN 976
>gi|17221593|dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 402 bits (1032), Expect = 1e-109
Identities = 189/251 (75%), Positives = 222/251 (88%)
Frame = +3
Query: 441 SNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDER 620
+ +DP P A A++L+NQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+G I+D+
Sbjct: 770 AQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDS 829
Query: 621 MLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYC 800
LF AACY+AKVTL ALGE+FEAAR+IM+WLG+CAKIIAS+N PVRWTTPLGLPVVQPY
Sbjct: 830 ELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYR 889
Query: 801 RSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFA 980
+ RHLI+TSLQ+L LQRE V V++QRTAFPPNF+HSLDG+HMMMTAVACR AGLNFA
Sbjct: 890 KIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFA 949
Query: 981 GVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDL 1160
GVHDSYWTHACDVD +NRILREKFVELY PILE LL+SFQ SYP L+FPP+P+RGDFD+
Sbjct: 950 GVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDM 1009
Query: 1161 KEVLKSHYFFN 1193
++VL+S YFFN
Sbjct: 1010 RDVLESPYFFN 1020
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,252,929,668,096
Number of Sequences: 15229318
Number of Extensions: 2252929668096
Number of Successful Extensions: 564714463
Number of sequences better than 0.0: 0
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