BLASTX 7.6.2
Query= UN19080 /QuerySize=1648
(1647 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G24120.1 | Symbols: PDE319, SCA3 | SCA3 (SCABR... 497 1e-140
TAIR9_protein||AT1G68990.1 | Symbols: | DNA-directed RNA polyme... 372 6e-103
TAIR9_protein||AT5G15700.1 | Symbols: | DNA-directed RNA polyme... 369 5e-102
TAIR9_protein||AT2G24120.2 | Symbols: PDE319, SCA3 | SCA3 (SCABR... 290 2e-078
>TAIR9_protein||AT2G24120.1 | Symbols: PDE319, SCA3 | SCA3 (SCABRA 3); DNA
binding / DNA-directed RNA polymerase | chr2:10249358-10254530 REVERSE
Length = 994
Score = 497 bits (1278), Expect = 1e-140
Identities = 245/255 (96%), Positives = 250/255 (98%)
Frame = +3
Query: 432 EEGSNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIS 611
++ S+KDPESNPTAALAKILI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVI+
Sbjct: 740 KKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIT 799
Query: 612 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQ 791
DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRW TPLGLPVVQ
Sbjct: 800 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQ 859
Query: 792 PYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGL 971
PYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGL
Sbjct: 860 PYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGL 919
Query: 972 NFAGVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGD 1151
NFAGVHDSYWTHACDVDTMNRILREKFVELY+TPILEDLLQSFQESYPNLVFPPVPKRGD
Sbjct: 920 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGD 979
Query: 1152 FDLKEVLKSHYFFN* 1196
FDLKEVLKS YFFN*
Sbjct: 980 FDLKEVLKSQYFFN* 994
Score = 290 bits (742), Expect = 2e-078
Identities = 140/148 (94%), Positives = 144/148 (97%)
Frame = +1
Query: 1 LEFAEGRPLGKSGLYWLKIHLANLYAGGVEKLSHDGRLAFVENHLDDIIDSAENAIHGKR 180
LEFAEGRPLGKSGL+WLKIHLANLYAGGVEKLSHD RLAFVENHLDDI+DSAEN IHGKR
Sbjct: 596 LEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKR 655
Query: 181 WWLKAEDPFQCLAACVILGQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAA 360
WWLKAEDPFQCLAACVIL QALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAA
Sbjct: 656 WWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAA 715
Query: 361 VNLVAGEKPADVYSEISLRVHEIMKKEA 444
VNLVAGEKPADVYSEIS RVHEIMKK++
Sbjct: 716 VNLVAGEKPADVYSEISRRVHEIMKKDS 743
>TAIR9_protein||AT1G68990.1 | Symbols: | DNA-directed RNA polymerase,
mitochondrial (RPOMT) | chr1:25935499-25940755 REVERSE
Length = 977
Score = 372 bits (953), Expect = 6e-103
Identities = 174/255 (68%), Positives = 216/255 (84%)
Frame = +3
Query: 432 EEGSNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIS 611
++ + +DPE+ P A AK++++QVDRKLVKQTVMTSVYGVTY GAR+QIK+RL+E+G
Sbjct: 723 QQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFE 782
Query: 612 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQ 791
D+ + F A+CY+AK+TL AL E+FEAARAI SW GDCAKIIAS+N+ V WTTPLGLPVVQ
Sbjct: 783 DDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQ 842
Query: 792 PYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGL 971
PY + RHL++T+LQVL L RE + V R+Q TAF PNF+HSLDG+HMMMTAVAC AGL
Sbjct: 843 PYRKPGRHLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGL 902
Query: 972 NFAGVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGD 1151
+FAGVHDS+WTHACDVD MN ILREKFVELY PILE+LL+SFQ+S+P++ FPP+P+RGD
Sbjct: 903 SFAGVHDSFWTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGD 962
Query: 1152 FDLKEVLKSHYFFN* 1196
FDL++VL+S YFFN*
Sbjct: 963 FDLRKVLESTYFFN* 977
Score = 228 bits (581), Expect = 8e-060
Identities = 104/148 (70%), Positives = 127/148 (85%)
Frame = +1
Query: 1 LEFAEGRPLGKSGLYWLKIHLANLYAGGVEKLSHDGRLAFVENHLDDIIDSAENAIHGKR 180
LEF EG+PLGKSGL WLKIH+ANLYAGGV+KL+++ R+AF E+HL+DI DS++ + GKR
Sbjct: 579 LEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKR 638
Query: 181 WWLKAEDPFQCLAACVILGQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAA 360
WWL AEDPFQCLAAC+ L +AL+SP P + ISH+PIHQDGSCNGLQHYAALGRD A A
Sbjct: 639 WWLNAEDPFQCLAACINLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADA 698
Query: 361 VNLVAGEKPADVYSEISLRVHEIMKKEA 444
VNLV GEKPADVY+EI+ RV +IM+++A
Sbjct: 699 VNLVTGEKPADVYTEIAARVLKIMQQDA 726
>TAIR9_protein||AT5G15700.1 | Symbols: | DNA-directed RNA polymerase (RPOT2) |
chr5:5115793-5121609 REVERSE
Length = 1012
Score = 369 bits (945), Expect = 5e-102
Identities = 177/252 (70%), Positives = 214/252 (84%)
Frame = +3
Query: 441 SNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDER 620
+++DPE P A A+ L+NQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+ DE+
Sbjct: 761 ADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEK 820
Query: 621 MLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYC 800
+F AACY+AKVTLAA+ E+F+AARAIM W G+CAKIIAS+N VRWTTPLGLPVVQPY
Sbjct: 821 EVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQPYH 880
Query: 801 RSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFA 980
+ L++TSLQ L+LQ E + V VR+QRTAFPPNF+HSLDG+HMMMTAVAC+ AG+ FA
Sbjct: 881 QMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGVCFA 940
Query: 981 GVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPKRGDFDL 1160
GVHDS+WTHACDVD +N ILREKFVELYS PILE+LL+SF++S+P+L FPP+P+RGD DL
Sbjct: 941 GVHDSFWTHACDVDKLNIILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGDLDL 1000
Query: 1161 KEVLKSHYFFN* 1196
K VL S YFFN*
Sbjct: 1001 KVVLDSPYFFN* 1012
Score = 239 bits (609), Expect = 4e-063
Identities = 113/150 (75%), Positives = 130/150 (86%)
Frame = +1
Query: 1 LEFAEGRPLGKSGLYWLKIHLANLYAGGVEKLSHDGRLAFVENHLDDIIDSAENAIHGKR 180
LEFAEGRP+G SGL WLKIHLANLYAGGV+KLS DGRLAF ENHLDDI DSA+ + G R
Sbjct: 614 LEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSR 673
Query: 181 WWLKAEDPFQCLAACVILGQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAA 360
WWL+AEDPFQCLA C+ L +AL+SPSP +V+SH+PIHQDGSCNGLQHYAALGRD+ A A
Sbjct: 674 WWLQAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEA 733
Query: 361 VNLVAGEKPADVYSEISLRVHEIMKKEAIR 450
VNLVAGEKPADVYS I+ RV +IM+++A R
Sbjct: 734 VNLVAGEKPADVYSGIATRVLDIMRRDADR 763
>TAIR9_protein||AT2G24120.2 | Symbols: PDE319, SCA3 | SCA3 (SCABRA 3); DNA
binding / DNA-directed RNA polymerase | chr2:10250139-10254530 REVERSE
Length = 896
Score = 290 bits (742), Expect = 2e-078
Identities = 140/148 (94%), Positives = 144/148 (97%)
Frame = +1
Query: 1 LEFAEGRPLGKSGLYWLKIHLANLYAGGVEKLSHDGRLAFVENHLDDIIDSAENAIHGKR 180
LEFAEGRPLGKSGL+WLKIHLANLYAGGVEKLSHD RLAFVENHLDDI+DSAEN IHGKR
Sbjct: 596 LEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKR 655
Query: 181 WWLKAEDPFQCLAACVILGQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAA 360
WWLKAEDPFQCLAACVIL QALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAA
Sbjct: 656 WWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAA 715
Query: 361 VNLVAGEKPADVYSEISLRVHEIMKKEA 444
VNLVAGEKPADVYSEIS RVHEIMKK++
Sbjct: 716 VNLVAGEKPADVYSEISRRVHEIMKKDS 743
Score = 276 bits (704), Expect = 4e-074
Identities = 139/146 (95%), Positives = 143/146 (97%)
Frame = +3
Query: 432 EEGSNKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIS 611
++ S+KDPESNPTAALAKILI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVI+
Sbjct: 740 KKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIT 799
Query: 612 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQ 791
DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRW TPLGLPVVQ
Sbjct: 800 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQ 859
Query: 792 PYCRSERHLIRTSLQVLALQREGNTV 869
PYCRSERHLIRTSLQVLALQREGNTV
Sbjct: 860 PYCRSERHLIRTSLQVLALQREGNTV 885
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,928,822,599
Number of Sequences: 33410
Number of Extensions: 9928822599
Number of Successful Extensions: 333338310
Number of sequences better than 0.0: 0
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