BLASTX 7.6.2
Query= UN19137 /QuerySize=1569
(1568 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G19360.1 | Symbols: | LOCATED IN: endoplasmic... 404 7e-113
TAIR9_protein||AT1G75110.1 | Symbols: RRA2 | RRA2 (REDUCED RESID... 378 6e-105
TAIR9_protein||AT1G75120.1 | Symbols: RRA1 | RRA1 (REDUCED RESID... 329 3e-090
>TAIR9_protein||AT1G19360.1 | Symbols: | LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST
Arabidopsis thaliana protein match is: RRA2 (REDUCED RESIDUAL ARABINOSE
2) (TAIR:AT1G75110.1); Has 165 Blast hits to 162 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
152; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). |
chr1:6690672-6692211 REVERSE
Length = 429
Score = 404 bits (1038), Expect = 7e-113
Identities = 195/210 (92%), Positives = 200/210 (95%)
Frame = +1
Query: 727 ETGGNHAVS*LKFRVLREFLQLGYGVLLSDVDIVFLQNPFRHLYRDSDVESMSDGHSNMT 906
+TGGNHAVS LKFRVLREFLQLGYGVLLSDVDIVFLQNPF HLYRDSDVESMSDGH N T
Sbjct: 220 KTGGNHAVSGLKFRVLREFLQLGYGVLLSDVDIVFLQNPFSHLYRDSDVESMSDGHDNHT 279
Query: 907 AYGFNDVFDEPAMGWARYAHTMRIWVFNSGFFYLRPTVPSIELLDRVADRLSKAKLWDQA 1086
AYGFNDVFDEPAMGWARYAHTMRIWVFNSGFFYLRPT+PSIELLDRVADRLSKAK+WDQA
Sbjct: 280 AYGFNDVFDEPAMGWARYAHTMRIWVFNSGFFYLRPTIPSIELLDRVADRLSKAKVWDQA 339
Query: 1087 VFNEELFYPSHPDYVGLHASKRVMDMYEFMNSKVLFKTVGKDQELKKKVKPVIVHVNYHP 1266
VFNEELFYPSHP+Y LHASKRVMDMYEFMNSKVLFKTV K+ ELKKKVKPVIVHVNYHP
Sbjct: 340 VFNEELFYPSHPEYTALHASKRVMDMYEFMNSKVLFKTVRKNHELKKKVKPVIVHVNYHP 399
Query: 1267 DKLNRMQAVVEFYVNGKQDALDSFPDGFE* 1356
DKLNRMQAVVEFYVNGKQDALDSFPDG E*
Sbjct: 400 DKLNRMQAVVEFYVNGKQDALDSFPDGSE* 429
Score = 366 bits (937), Expect = 4e-101
Identities = 188/223 (84%), Positives = 202/223 (90%), Gaps = 5/223 (2%)
Frame = +2
Query: 86 MAGRRDRTQQLRGSRIAIAILIGIIIGCVCAVLFPNGFFNSSSSITVNERL-----QTGS 250
MAGRRDR+QQLRGSRIAIAILIGI IGCVCAVLFP GFFNSSSS+ +E L Q GS
Sbjct: 1 MAGRRDRSQQLRGSRIAIAILIGIFIGCVCAVLFPYGFFNSSSSLKASEHLSKSSNQVGS 60
Query: 251 SSCESPARIKMLKSDFASLSEKNADLKKQVRELTEKLRSAEQGSDNANKQVLSLGPKIKP 430
S+CESP R+KMLKSDF +LSEKNA+LKKQVRELTEKLR AEQGSDNA KQVL+LG +IK
Sbjct: 61 SACESPERVKMLKSDFVTLSEKNAELKKQVRELTEKLRLAEQGSDNARKQVLALGTQIKA 120
Query: 431 GPFGTVKSLRTNPTILPDESVNPRLAKILEDIAVDKEVIVALANSNVKAMLEVQIASVKR 610
GPFGTVKSLRTNPTILPDES+NPRLAKILE+IAVDKEVIVALAN+NVKAMLEVQIAS+KR
Sbjct: 121 GPFGTVKSLRTNPTILPDESINPRLAKILEEIAVDKEVIVALANANVKAMLEVQIASIKR 180
Query: 611 LGITNYLVVALDDYIENFCKSNDVAYYKRDPDKDVDTVGKPEG 739
+GITNYLVVALDDYIEN CK NDVAYYKRDPDKDVDTVGK G
Sbjct: 181 VGITNYLVVALDDYIENLCKENDVAYYKRDPDKDVDTVGKTGG 223
>TAIR9_protein||AT1G75110.1 | Symbols: RRA2 | RRA2 (REDUCED RESIDUAL ARABINOSE
2) | chr1:28194348-28195885 REVERSE
Length = 429
Score = 378 bits (970), Expect = 6e-105
Identities = 182/210 (86%), Positives = 195/210 (92%), Gaps = 1/210 (0%)
Frame = +1
Query: 727 ETGGNHAVS*LKFRVLREFLQLGYGVLLSDVDIVFLQNPFRHLYRDSDVESMSDGHSNMT 906
++GGNHAVS LKFRVLREFLQLGY VLLSDVDIVFLQNPF HL+RDSDVESMSDGH N T
Sbjct: 221 KSGGNHAVSGLKFRVLREFLQLGYSVLLSDVDIVFLQNPFSHLHRDSDVESMSDGHDNNT 280
Query: 907 AYGFNDVFDEPAMGWARYAHTMRIWVFNSGFFYLRPTVPSIELLDRVADRLSKAKLWDQA 1086
AYGFNDVFDEP+MGWARYAHTMRIWVFNSGFFYLRPT+PSI+LLDRVAD LSK++ WDQA
Sbjct: 281 AYGFNDVFDEPSMGWARYAHTMRIWVFNSGFFYLRPTIPSIDLLDRVADTLSKSEAWDQA 340
Query: 1087 VFNEELFYPSHPDYVGLHASKRVMDMYEFMNSKVLFKTVGKDQELKKKVKPVIVHVNYHP 1266
VFNE+LFYPSHP Y GLHASKRVMDMYEFMNSKVLFKTV K+QEL KK+KPVIVH+NYHP
Sbjct: 341 VFNEQLFYPSHPGYTGLHASKRVMDMYEFMNSKVLFKTVRKNQEL-KKLKPVIVHLNYHP 399
Query: 1267 DKLNRMQAVVEFYVNGKQDALDSFPDGFE* 1356
DKL RM AVVEFYVNGKQDALDSFPDG +*
Sbjct: 400 DKLERMHAVVEFYVNGKQDALDSFPDGSD* 429
Score = 314 bits (802), Expect = 2e-085
Identities = 159/224 (70%), Positives = 187/224 (83%), Gaps = 6/224 (2%)
Frame = +2
Query: 86 MAGRRDRTQQLRGSRIAIAILIGIIIGCVCAVLFPNGFFNSSSSITVNER------LQTG 247
MAGRRDR QQLRGSRIAIAI +GI+IGCVC+VLFPNGFFNS SS+ NE G
Sbjct: 1 MAGRRDRIQQLRGSRIAIAIFVGILIGCVCSVLFPNGFFNSGSSLIANEERISKSTSTDG 60
Query: 248 SSSCESPARIKMLKSDFASLSEKNADLKKQVRELTEKLRSAEQGSDNANKQVLSLGPKIK 427
+SCES R+KMLKSDF+ +S KNA+L+KQVRELTEK+R AEQ ++NA KQVL LG +IK
Sbjct: 61 LASCESSERVKMLKSDFSIISVKNAELRKQVRELTEKVRLAEQETENARKQVLVLGSEIK 120
Query: 428 PGPFGTVKSLRTNPTILPDESVNPRLAKILEDIAVDKEVIVALANSNVKAMLEVQIASVK 607
GPFGTVKSLRTNPT++PDESVNPRLAK+LE +AV+KE+IV LANSNVK MLE+QIASVK
Sbjct: 121 AGPFGTVKSLRTNPTVVPDESVNPRLAKLLEKVAVNKEIIVVLANSNVKPMLELQIASVK 180
Query: 608 RLGITNYLVVALDDYIENFCKSNDVAYYKRDPDKDVDTVGKPEG 739
R+GI NYL+VALDD +E+FC+S +V +YKRDPDK VD VGK G
Sbjct: 181 RVGIQNYLIVALDDSMESFCESKEVVFYKRDPDKAVDMVGKSGG 224
>TAIR9_protein||AT1G75120.1 | Symbols: RRA1 | RRA1 (REDUCED RESIDUAL ARABINOSE
1) | chr1:28197022-28198656 REVERSE
Length = 403
Score = 329 bits (843), Expect = 3e-090
Identities = 162/200 (81%), Positives = 176/200 (88%), Gaps = 1/200 (0%)
Frame = +1
Query: 748 VS*LKFRVLREFLQLGYGVLLSDVDIVFLQNPFRHLYRDSDVESMSDGHSNMTAYGFNDV 927
VS LKFRVLREFLQLGYGVLLSDVDIVFLQNPF HLYRDSDVESMSDGH N TAYGFNDV
Sbjct: 203 VSGLKFRVLREFLQLGYGVLLSDVDIVFLQNPFGHLYRDSDVESMSDGHDNNTAYGFNDV 262
Query: 928 FDEPAMGWARYAHTMRIWVFNSGFFYLRPTVPSIELLDRVADRLSKAKLWDQAVFNEELF 1107
FD+P M +R +T RIWVFNSGFFYLRPT+PSIELLDRV D LSK+ WDQAVFN+ LF
Sbjct: 263 FDDPTMTRSRTVYTNRIWVFNSGFFYLRPTLPSIELLDRVTDTLSKSGGWDQAVFNQHLF 322
Query: 1108 YPSHPDYVGLHASKRVMDMYEFMNSKVLFKTVGKDQELKKKVKPVIVHVNYHPDKLNRMQ 1287
YPSHP Y GL+ASKRVMD+YEFMNS+VLFKTV KD+E+ KK+KPVI+H+NYH DKL RMQ
Sbjct: 323 YPSHPGYTGLYASKRVMDVYEFMNSRVLFKTVRKDEEM-KKLKPVIIHMNYHSDKLERMQ 381
Query: 1288 AVVEFYVNGKQDALDSFPDG 1347
A VEFYVNGKQDALD F DG
Sbjct: 382 AAVEFYVNGKQDALDRFRDG 401
Score = 251 bits (639), Expect = 1e-066
Identities = 131/215 (60%), Positives = 160/215 (74%), Gaps = 19/215 (8%)
Frame = +2
Query: 86 MAGRRDRTQQLRGSRIAIAILIGIIIGCVCAVLFPNGFFNSSSSITVNERLQTGSSSCES 265
MA R+++ Q R IAIA+L+GI IGCVC +L PN F N SS + S+SCES
Sbjct: 1 MAVRKEKVQPFRECGIAIAVLVGIFIGCVCTILIPNDFVNFRSS-------KVASASCES 53
Query: 266 PARIKMLKSDFASLSEKNADLKKQVRELTEKLRSAEQGSDNANKQVLSLGPKIKPGPFGT 445
P R+KM K++FA +SEKN +L+KQV +LTEK+R AEQ K+V IK GPFGT
Sbjct: 54 PERVKMFKAEFAIISEKNGELRKQVSDLTEKVRLAEQ------KEV------IKAGPFGT 101
Query: 446 VKSLRTNPTILPDESVNPRLAKILEDIAVDKEVIVALANSNVKAMLEVQIASVKRLGITN 625
V L+TNPT+ PDES NPRLAK+LE +AV+KE+IV LAN+NVK MLEVQIASVKR+GI N
Sbjct: 102 VTGLQTNPTVAPDESANPRLAKLLEKVAVNKEIIVVLANNNVKPMLEVQIASVKRVGIQN 161
Query: 626 YLVVALDDYIENFCKSNDVAYYKRDPDKDVDTVGK 730
YLVV LDD +E+FCKSN+VAYYKRDPD +D VGK
Sbjct: 162 YLVVPLDDSLESFCKSNEVAYYKRDPDNAIDVVGK 196
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,972,731,866
Number of Sequences: 33410
Number of Extensions: 9972731866
Number of Successful Extensions: 333376722
Number of sequences better than 0.0: 0
|
