BLASTX 7.6.2
Query= UN19159 /QuerySize=982
(981 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FJK7|CCC12_ARATH Cyclin-C1-2 OS=Arabidopsis thaliana GN=CYC... 494 6e-139
sp|Q9FJK6|CCC11_ARATH Cyclin-C1-1 OS=Arabidopsis thaliana GN=CYC... 386 2e-106
sp|P93411|CCC11_ORYSJ Cyclin-C1-1 OS=Oryza sativa subsp. japonic... 339 2e-092
sp|Q86KE7|CCNC_DICDI Cyclin-C OS=Dictyostelium discoideum GN=cyc... 196 2e-049
sp|P39947|CCNC_RAT Cyclin-C OS=Rattus norvegicus GN=Ccnc PE=2 SV=2 184 7e-046
sp|Q4KLA0|CCNC_XENLA Cyclin-C OS=Xenopus laevis GN=ccnc PE=2 SV=1 184 1e-045
sp|Q28F72|CCNC_XENTR Cyclin-C OS=Xenopus tropicalis GN=ccnc PE=2... 184 1e-045
sp|P55168|CCNC_CHICK Cyclin-C OS=Gallus gallus GN=CCNC PE=3 SV=1 184 1e-045
sp|Q3ZCK5|CCNC_BOVIN Cyclin-C OS=Bos taurus GN=CCNC PE=2 SV=1 183 2e-045
sp|P24863|CCNC_HUMAN Cyclin-C OS=Homo sapiens GN=CCNC PE=1 SV=2 183 2e-045
sp|Q62447|CCNC_MOUSE Cyclin-C OS=Mus musculus GN=Ccnc PE=2 SV=3 180 2e-044
sp|Q16JA2|CCNC_AEDAE Cyclin-C OS=Aedes aegypti GN=CycC PE=3 SV=1 166 2e-040
sp|Q1EAW8|SSN8_COCIM RNA polymerase II holoenzyme cyclin-like su... 117 1e-025
sp|Q2GVK1|SSN8_CHAGB RNA polymerase II holoenzyme cyclin-like su... 111 8e-024
sp|Q9C1M4|SSN8_GIBMO RNA polymerase II holoenzyme cyclin-like su... 98 7e-020
sp|A4RD79|SSN8_MAGGR RNA polymerase II holoenzyme cyclin-like su... 96 3e-019
>sp|Q9FJK7|CCC12_ARATH Cyclin-C1-2 OS=Arabidopsis thaliana GN=CYCC1-2 PE=2 SV=1
Length = 253
Score = 494 bits (1270), Expect = 6e-139
Identities = 237/253 (93%), Positives = 251/253 (99%)
Frame = -2
Query: 932 MASNFWTSTHFKELKDPEEINVVHPLDAQRGISVEDLRLIKLHMSNYISKLAQHIKIRQR 753
MASNFWTSTH+KELKDPEE+NVVHPLDAQRGISVED RLIKLHMSNYISKLAQHIKIRQR
Sbjct: 1 MASNFWTSTHYKELKDPEEVNVVHPLDAQRGISVEDFRLIKLHMSNYISKLAQHIKIRQR 60
Query: 752 VVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKILVFYIRKLYADEKF 573
VVATA+TYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAK+LVFY++KLYADEKF
Sbjct: 61 VVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKLLVFYMKKLYADEKF 120
Query: 572 RYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWGIVNDTYRMD 393
RYEIKDILEMEMK+LEALNFYLVVFHPYRSLPEFLQDSG+NDTSMTHLTWG+VNDTYRMD
Sbjct: 121 RYEIKDILEMEMKVLEALNFYLVVFHPYRSLPEFLQDSGINDTSMTHLTWGLVNDTYRMD 180
Query: 392 LILTHPPYLITLACIYVASVYKEKDIKTWFEELSVDMNIVKNIAMEILDFYENHRMFTEE 213
LIL HPP+LITLACIY+ASV+KEKDIKTWFEELSVDMNIVKNIAMEILDFYENHR+FTEE
Sbjct: 181 LILIHPPFLITLACIYIASVHKEKDIKTWFEELSVDMNIVKNIAMEILDFYENHRLFTEE 240
Query: 212 RVHAAFNKLATSP 174
RVHAAFNKLAT+P
Sbjct: 241 RVHAAFNKLATNP 253
>sp|Q9FJK6|CCC11_ARATH Cyclin-C1-1 OS=Arabidopsis thaliana GN=CYCC1-1 PE=2 SV=2
Length = 253
Score = 386 bits (990), Expect = 2e-106
Identities = 182/250 (72%), Positives = 219/250 (87%)
Frame = -2
Query: 932 MASNFWTSTHFKELKDPEEINVVHPLDAQRGISVEDLRLIKLHMSNYISKLAQHIKIRQR 753
MA+NFW S+H+K+L DPEE++VVH LD +RGIS++D +LIK HMSN+I KLAQHIK+RQR
Sbjct: 1 MAANFWNSSHYKQLLDPEEVDVVHDLDKERGISIDDFKLIKFHMSNHIMKLAQHIKVRQR 60
Query: 752 VVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKILVFYIRKLYADEKF 573
VVATAITYMRRVY RKS+ E+EPRLVA TCLYLA KAEES+V A+ LVFYI++LY DE
Sbjct: 61 VVATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARNLVFYIKRLYPDEYN 120
Query: 572 RYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWGIVNDTYRMD 393
+YE+KDIL MEMK+LEAL++YLVVFHPYRSL EFLQD+ LND +M +TWGIVNDTY+MD
Sbjct: 121 KYELKDILGMEMKVLEALDYYLVVFHPYRSLSEFLQDAALNDVNMNQITWGIVNDTYKMD 180
Query: 392 LILTHPPYLITLACIYVASVYKEKDIKTWFEELSVDMNIVKNIAMEILDFYENHRMFTEE 213
LIL HPPY I LACIY+ASV++EKDI WFE+L DMN+VKNIAMEILDFYEN+R TEE
Sbjct: 181 LILVHPPYRIALACIYIASVHREKDITAWFEDLHEDMNLVKNIAMEILDFYENYRTITEE 240
Query: 212 RVHAAFNKLA 183
+V++AF+KLA
Sbjct: 241 KVNSAFSKLA 250
>sp|P93411|CCC11_ORYSJ Cyclin-C1-1 OS=Oryza sativa subsp. japonica
GN=Os09g0504400 PE=2 SV=1
Length = 257
Score = 339 bits (868), Expect = 2e-092
Identities = 163/255 (63%), Positives = 209/255 (81%), Gaps = 8/255 (3%)
Frame = -2
Query: 932 MASNFWTSTHFKELKDPEEINVVHPLDAQRGISVEDLRLIKLHMSNYISKLAQHIKIRQR 753
MA+NFWTS+H K+L D E+++ V D+ RGI++E+ RL+K+HMS +I +LAQ +K+RQR
Sbjct: 1 MAANFWTSSHCKQLLDQEDVDKVPQADSDRGITLEEFRLVKIHMSFHIWRLAQQVKVRQR 60
Query: 752 VVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKILVFYIRKLYA-DEK 576
V+ATA+TY RRVYTRKS+TEY+PRLVAPTCLYLA K EES V A++LVFYI+K+ A DEK
Sbjct: 61 VIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKVEESTVQARLLVFYIKKMCASDEK 120
Query: 575 FRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWGIVNDTYRM 396
+R+EIKDILEMEMK+LEAL++YLVV+HPYR L + LQD+G+ D +T WGIVNDTY+M
Sbjct: 121 YRFEIKDILEMEMKLLEALDYYLVVYHPYRPLLQLLQDAGITD--LTQFAWGIVNDTYKM 178
Query: 395 DLILTHPPYLITLACIYVASVYKEKDIKTWFEELSVDMNIVKNIAMEILDFYENHRM--- 225
DLIL HPPY+I LACIY+ASV K+KDI WFEEL VDMNIVKNI+MEILDFY+ +++
Sbjct: 179 DLILIHPPYMIALACIYIASVLKDKDITLWFEELRVDMNIVKNISMEILDFYDTYKIDPQ 238
Query: 224 --FTEERVHAAFNKL 186
E+++ NKL
Sbjct: 239 RGLPEDKIAPVMNKL 253
>sp|Q86KE7|CCNC_DICDI Cyclin-C OS=Dictyostelium discoideum GN=cycC PE=3 SV=1
Length = 255
Score = 196 bits (497), Expect = 2e-049
Identities = 102/253 (40%), Positives = 155/253 (61%), Gaps = 8/253 (3%)
Frame = -2
Query: 932 MASNFWTSTHFKE-LKDPEEINVVHPLDAQRGISVEDLRLIKLHMSNYISKLAQHIKIRQ 756
MA+NFW S+H E L D +I +P D Q +E L+ ++ H I L +K+RQ
Sbjct: 1 MAANFWESSHCTEWLLDRNKIEESNPKDKQYLTPIE-LKKLRTHYCFVIQNLGNALKLRQ 59
Query: 755 RVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKILVFYIRKLYADEK 576
R ++TAI Y +R Y + S + EPRLVA TCLYL+ K EE + AK ++++ D
Sbjct: 60 RAISTAIVYFKRFYLKNSFVDCEPRLVAVTCLYLSSKVEECITQAKKCAAKMKEI--DHS 117
Query: 575 FRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWGIVNDTYRM 396
F Y + DILE E +LE L+F L+++HPY+SLP +LQ SGL+ S+ + WGIVND+YR
Sbjct: 118 FNYLMNDILECEFFVLEELDFCLIIYHPYKSLPFYLQSSGLDPASI-EIIWGIVNDSYRT 176
Query: 395 DLILTHPPYLITLACIYVASVYKEKDIKTWFEELSVDMNIVKNIAMEILDFYE---NHRM 225
D+ L +PP+++ L CI + S +KDIK W EL+V+M + ++ +++D+YE +
Sbjct: 177 DVCLLYPPFVVGLGCILLGSYLLKKDIKQWLSELNVEMKDIWEVSKDLIDYYEFEKQQSL 236
Query: 224 FTEERVHAAFNKL 186
+ + +NKL
Sbjct: 237 QNQSELDLLYNKL 249
>sp|P39947|CCNC_RAT Cyclin-C OS=Rattus norvegicus GN=Ccnc PE=2 SV=2
Length = 278
Score = 184 bits (467), Expect = 7e-046
Identities = 103/250 (41%), Positives = 148/250 (59%), Gaps = 16/250 (6%)
Frame = -2
Query: 932 MASNFWTSTHFKE-LKDPEEINVVHPLDAQRGISVEDLRLIKLHMSNYISKLAQHIKIRQ 756
MA NFW S+H+ + + D E + + +S E+ +++ +N I L +H+K+RQ
Sbjct: 1 MAGNFWQSSHYLQWILDKERQKDL------KFLSEEEYWKLQIFFTNVIQALGEHLKLRQ 54
Query: 755 RVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEE-------SVVHAKILVFYIR 597
+V+ATA Y +R Y R SL +P L+APTC++LA K EE S++ A V R
Sbjct: 55 QVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTSLIAATTSVLKTR 114
Query: 596 KLYADEK-FRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWG 420
YA K F Y + ILE E +LE ++ L+V+HPYR L +++QD G D + L W
Sbjct: 115 FSYASPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDV-LLPLAWR 173
Query: 419 IVNDTYRMDLILTHPPYLITLACIYVASVYKEKDIKTWFEELSVDMNIVKNIAMEILDFY 240
IVNDTYR DL L +PP++I LAC++VA V ++KD + WF ELSVDM + I IL Y
Sbjct: 174 IVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLY 233
Query: 239 ENHRMFTEER 210
E + F E +
Sbjct: 234 EQWKNFDERK 243
>sp|Q4KLA0|CCNC_XENLA Cyclin-C OS=Xenopus laevis GN=ccnc PE=2 SV=1
Length = 283
Score = 184 bits (466), Expect = 1e-045
Identities = 102/254 (40%), Positives = 152/254 (59%), Gaps = 11/254 (4%)
Frame = -2
Query: 932 MASNFWTSTHFKE-LKDPEEINVVHPLDAQRGISVEDLRLIKLHMSNYISKLAQHIKIRQ 756
MA NFW S+H+ + + D +++ D + +S E+ +++ +N I L +H+K+RQ
Sbjct: 1 MAGNFWQSSHYLQWILDKQDLLKERQKDL-KFLSEEEYWKLQIFFTNVIQALGEHLKLRQ 59
Query: 755 RVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEE-------SVVHAKILVFYIR 597
+V+ATA Y +R Y R SL +P L+APTC++LA K EE ++ A V R
Sbjct: 60 QVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTR 119
Query: 596 KLYA-DEKFRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWG 420
YA ++F Y + ILE E +LE ++ L+V+HPYR L +++QD G D + L W
Sbjct: 120 FSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQED-MLLPLAWR 178
Query: 419 IVNDTYRMDLILTHPPYLITLACIYVASVYKEKDIKTWFEELSVDMNIVKNIAMEILDFY 240
IVNDTYR DL L +PP++I LAC++VA V ++KD + WF ELSVDM + I IL Y
Sbjct: 179 IVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLY 238
Query: 239 ENHRMFTEERVHAA 198
E + F E + A+
Sbjct: 239 EQWKNFDERKEMAS 252
>sp|Q28F72|CCNC_XENTR Cyclin-C OS=Xenopus tropicalis GN=ccnc PE=2 SV=1
Length = 283
Score = 184 bits (466), Expect = 1e-045
Identities = 104/259 (40%), Positives = 154/259 (59%), Gaps = 12/259 (4%)
Frame = -2
Query: 932 MASNFWTSTHFKE-LKDPEEINVVHPLDAQRGISVEDLRLIKLHMSNYISKLAQHIKIRQ 756
MA NFW S+H+ + + D +++ D + +S E+ +++ +N I L +H+K+RQ
Sbjct: 1 MAGNFWQSSHYLQWILDKQDLLKERQKDL-KFLSEEEYWKLQIFFTNVIQALGEHLKLRQ 59
Query: 755 RVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEE-------SVVHAKILVFYIR 597
+V+ATA Y +R Y R SL +P L+APTC++LA K EE ++ A V R
Sbjct: 60 QVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTR 119
Query: 596 KLYA-DEKFRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWG 420
YA ++F Y + ILE E +LE ++ L+V+HPYR L +++QD G D + L W
Sbjct: 120 FSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQED-MLLPLAWR 178
Query: 419 IVNDTYRMDLILTHPPYLITLACIYVASVYKEKDIKTWFEELSVDMNIVKNIAMEILDFY 240
IVNDTYR DL L +PP++I LAC++VA V ++KD + WF ELSVDM + I IL Y
Sbjct: 179 IVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLY 238
Query: 239 ENHRMFTEERVHAA-FNKL 186
E + F E + A NK+
Sbjct: 239 EQWKNFDERKEMATILNKM 257
>sp|P55168|CCNC_CHICK Cyclin-C OS=Gallus gallus GN=CCNC PE=3 SV=1
Length = 283
Score = 184 bits (465), Expect = 1e-045
Identities = 101/250 (40%), Positives = 150/250 (60%), Gaps = 11/250 (4%)
Frame = -2
Query: 932 MASNFWTSTHFKE-LKDPEEINVVHPLDAQRGISVEDLRLIKLHMSNYISKLAQHIKIRQ 756
MA NFW S+H+ + + D +++ D + +S E+ +++ +N I L +H+K+RQ
Sbjct: 1 MAGNFWQSSHYLQWILDKQDLLKERQKDL-KFLSEEEYWKLQIFFTNVIQALGEHLKLRQ 59
Query: 755 RVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEE-------SVVHAKILVFYIR 597
+V+ATA Y +R Y R SL +P L+APTC++LA K EE ++ A V R
Sbjct: 60 QVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTR 119
Query: 596 KLYA-DEKFRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWG 420
YA ++F Y + ILE E +LE ++ L+V+HPYR L +++QD G D + L W
Sbjct: 120 FSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQED-MLLPLAWR 178
Query: 419 IVNDTYRMDLILTHPPYLITLACIYVASVYKEKDIKTWFEELSVDMNIVKNIAMEILDFY 240
IVNDTYR DL L +PP++I LAC++VA V ++KD + WF ELSVDM + I IL Y
Sbjct: 179 IVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLY 238
Query: 239 ENHRMFTEER 210
E + F E +
Sbjct: 239 EQWKNFDERK 248
>sp|Q3ZCK5|CCNC_BOVIN Cyclin-C OS=Bos taurus GN=CCNC PE=2 SV=1
Length = 283
Score = 183 bits (464), Expect = 2e-045
Identities = 100/250 (40%), Positives = 151/250 (60%), Gaps = 11/250 (4%)
Frame = -2
Query: 932 MASNFWTSTHFKE-LKDPEEINVVHPLDAQRGISVEDLRLIKLHMSNYISKLAQHIKIRQ 756
MA NFW S+H+ + + D +++ D + +S E+ +++ +N I L +H+K+RQ
Sbjct: 1 MAGNFWQSSHYLQWILDKQDLLKERQKDL-KFLSEEEYWKLQIFFTNVIQALGEHLKLRQ 59
Query: 755 RVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEE-------SVVHAKILVFYIR 597
+V+ATA Y +R Y R SL +P L+APTC++LA K EE ++ A V R
Sbjct: 60 QVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTR 119
Query: 596 KLYA-DEKFRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWG 420
YA ++F Y++ +LE E +LE ++ L+V+HPYR L +++QD G D + L W
Sbjct: 120 FSYAFPKEFPYKMNHVLECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQED-MLLPLAWR 178
Query: 419 IVNDTYRMDLILTHPPYLITLACIYVASVYKEKDIKTWFEELSVDMNIVKNIAMEILDFY 240
IVNDTYR DL L +PP++I LAC++VA V ++KD + WF ELSVDM + I IL Y
Sbjct: 179 IVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLY 238
Query: 239 ENHRMFTEER 210
E + F E +
Sbjct: 239 EQWKNFDERK 248
>sp|P24863|CCNC_HUMAN Cyclin-C OS=Homo sapiens GN=CCNC PE=1 SV=2
Length = 283
Score = 183 bits (464), Expect = 2e-045
Identities = 101/250 (40%), Positives = 150/250 (60%), Gaps = 11/250 (4%)
Frame = -2
Query: 932 MASNFWTSTHFKE-LKDPEEINVVHPLDAQRGISVEDLRLIKLHMSNYISKLAQHIKIRQ 756
MA NFW S+H+ + + D +++ D + +S E+ +++ +N I L +H+K+RQ
Sbjct: 1 MAGNFWQSSHYLQWILDKQDLLKERQKDL-KFLSEEEYWKLQIFFTNVIQALGEHLKLRQ 59
Query: 755 RVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEE-------SVVHAKILVFYIR 597
+V+ATA Y +R Y R SL +P L+APTC++LA K EE ++ A V R
Sbjct: 60 QVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTR 119
Query: 596 KLYA-DEKFRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWG 420
YA ++F Y + ILE E +LE ++ L+V+HPYR L +++QD G D + L W
Sbjct: 120 FSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQED-MLLPLAWR 178
Query: 419 IVNDTYRMDLILTHPPYLITLACIYVASVYKEKDIKTWFEELSVDMNIVKNIAMEILDFY 240
IVNDTYR DL L +PP++I LAC++VA V ++KD + WF ELSVDM + I IL Y
Sbjct: 179 IVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLY 238
Query: 239 ENHRMFTEER 210
E + F E +
Sbjct: 239 EQWKNFDERK 248
>sp|Q62447|CCNC_MOUSE Cyclin-C OS=Mus musculus GN=Ccnc PE=2 SV=3
Length = 283
Score = 180 bits (455), Expect = 2e-044
Identities = 100/250 (40%), Positives = 149/250 (59%), Gaps = 11/250 (4%)
Frame = -2
Query: 932 MASNFWTSTHFKE-LKDPEEINVVHPLDAQRGISVEDLRLIKLHMSNYISKLAQHIKIRQ 756
MA NFW S+H+ + + D +++ D + +S E+ +++ +N I L +H+K+RQ
Sbjct: 1 MAGNFWQSSHYLQWILDKQDLLKERQKDL-KFLSEEEYWKLQIFFTNVIQALGEHLKLRQ 59
Query: 755 RVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEE-------SVVHAKILVFYIR 597
+V+ATA Y +R R SL +P L+APTC++LA K EE ++ A V R
Sbjct: 60 QVIATATVYFKRFDARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAATTSVLKTR 119
Query: 596 KLYA-DEKFRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWG 420
YA ++F Y + ILE E +LE ++ L+V+HPYR L +++QD G D + L W
Sbjct: 120 FSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDV-LLPLAWR 178
Query: 419 IVNDTYRMDLILTHPPYLITLACIYVASVYKEKDIKTWFEELSVDMNIVKNIAMEILDFY 240
IVNDTYR DL L +PP++I LAC++VA V ++KD + WF ELSVDM + I IL Y
Sbjct: 179 IVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLY 238
Query: 239 ENHRMFTEER 210
E + F E +
Sbjct: 239 EQWKNFDERK 248
>sp|Q16JA2|CCNC_AEDAE Cyclin-C OS=Aedes aegypti GN=CycC PE=3 SV=1
Length = 265
Score = 166 bits (420), Expect = 2e-040
Identities = 94/258 (36%), Positives = 150/258 (58%), Gaps = 11/258 (4%)
Frame = -2
Query: 932 MASNFWTSTHFKE-LKDPEEINVVHPLDAQRGISVEDLRLIKLHMSNYISKLAQHIKIRQ 756
MA NFW S+H ++ + D +++ D + ++ E+ + I + +N I L + +K+RQ
Sbjct: 1 MAGNFWQSSHHQQWILDKQDLIRERQHDL-KNLTEEEYQKIFMFFANVIQVLGEQLKLRQ 59
Query: 755 RVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEE-SVVHAKILVFYIRKL---- 591
+V+ATA Y +R Y R SL +P L+APTC+ LA K EE V+ L+ + +
Sbjct: 60 QVIATATVYFKRFYARNSLKCIDPLLLAPTCILLASKVEEFGVISNSRLITTCQTVIKNK 119
Query: 590 --YA-DEKFRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWG 420
YA ++F Y ILE E +LE L+ L+V+ PYR L + +QD G D +T LTW
Sbjct: 120 FSYAYQQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLIQDIGQEDQLLT-LTWR 178
Query: 419 IVNDTYRMDLILTHPPYLITLACIYVASVYKEKDIKTWFEELSVDMNIVKNIAMEILDFY 240
++ND+ R D+ L +PPY I + C+ +A V +K++K WF EL+VDM V+ IA IL+ +
Sbjct: 179 LINDSLRTDVSLLYPPYQIAIGCLQIACVILQKELKAWFAELNVDMEKVQEIARAILNVF 238
Query: 239 ENHRMFTEERVHAAFNKL 186
E + + E+ + K+
Sbjct: 239 ELWKSYDEKEIQGLLEKM 256
>sp|Q1EAW8|SSN8_COCIM RNA polymerase II holoenzyme cyclin-like subunit
OS=Coccidioides immitis GN=SSN8 PE=3 SV=1
Length = 318
Score = 117 bits (292), Expect = 1e-025
Identities = 72/223 (32%), Positives = 117/223 (52%), Gaps = 22/223 (9%)
Frame = -2
Query: 932 MASNFWTST-HFKELKDPEEINVVHPL--DAQRGI----SVEDLRLIKLHMSNYISKLAQ 774
MA+++W+ST H L EE+ + DA+R + DLRL ++++ + KLA+
Sbjct: 1 MAADYWSSTQHQSWLFGREELAEARKVLGDAERPFIQQYPLPDLRLFNIYVNQQLIKLAK 60
Query: 773 HIKIRQRVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKILVFYIRK 594
+ +RQ+ +ATA Y++R YT+ + P LV T YLACK EE H ++++ R
Sbjct: 61 RLNVRQQALATAQVYVKRFYTKVEIRRTNPYLVLTTAFYLACKIEECPQHIRLVLGEARG 120
Query: 593 LY--------------ADEKFRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSG 456
L+ + E + I E E ++ +N L+V HPYR+L E
Sbjct: 121 LWPAIMENVATSTLTRSPEFIAPDSAKIGECEFWLISEMNSQLIVHHPYRTLSELQSYLS 180
Query: 455 LNDTSMTHLTWGIVNDTYRMDLILTHPPYLITLACIYVASVYK 327
L + L W ++ND Y DL+L HPP++I++ I++A V+K
Sbjct: 181 LTSDEIA-LAWSVINDHYLTDLLLLHPPHVISVMAIFIAVVFK 222
>sp|Q2GVK1|SSN8_CHAGB RNA polymerase II holoenzyme cyclin-like subunit
OS=Chaetomium globosum GN=SSN8 PE=3 SV=2
Length = 364
Score = 111 bits (277), Expect = 8e-024
Identities = 57/166 (34%), Positives = 96/166 (57%), Gaps = 1/166 (0%)
Frame = -2
Query: 824 LRLIKLHMSNYISKLAQHIKIRQRVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACK 645
LR + ++ + I++L++ I +RQ+V+ATA Y++R YTR ++ + P LV T LYLACK
Sbjct: 44 LRHLNIYFNQQINRLSKRIGLRQQVMATAQVYLKRFYTRIAIRQTNPYLVLTTVLYLACK 103
Query: 644 AEESVVHAKILVFYIRKLYADEKFRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQ 465
EE H +++ R L+ + ++ + E E ++ ++ L+V PYRSL
Sbjct: 104 MEECPQHIRMMTQEARSLWPSDLHGHDPARVGECEFSLISEMHSNLIVHQPYRSLLGVQD 163
Query: 464 DSGLNDTSMTHLTWGIVNDTYRMDLILTHPPYLITLACIYVASVYK 327
+ GL M+ L W ++ND Y DL L HPP+++ L + +A V +
Sbjct: 164 EFGLTQDEMS-LAWTVINDHYMTDLPLLHPPHVVALTAVLLALVLR 208
>sp|Q9C1M4|SSN8_GIBMO RNA polymerase II holoenzyme cyclin-like subunit
OS=Gibberella moniliformis GN=SSN8 PE=1 SV=1
Length = 319
Score = 98 bits (243), Expect = 7e-020
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Frame = -2
Query: 932 MASNFWTST--HFKELKDPEEINVVHPLDAQ-----RGISVEDLRLIKLHMSNYISKLAQ 774
M++N+W ST F + + + L+ R + R + ++ + + +LA+
Sbjct: 1 MSANYWHSTQCRFWSFTKEQLVTMRQKLEEDNAELVRMFPLPQQRRLYIYFNQQLIRLAK 60
Query: 773 HIKIRQRVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKILVFYIRK 594
+ IRQ+ +ATA YM+R Y++ + P LV T +YLACK EES H +++V R+
Sbjct: 61 RLTIRQQSMATAQVYMKRFYSKVEIRRTNPYLVIATAIYLACKIEESPQHIRLIVTEARQ 120
Query: 593 LYADEKFRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDSGLNDTSMTHLTWGIV 414
++ D + + E E ++ + L+VF PYR++ + L D + L ++
Sbjct: 121 MWGD-LVAIDTSKLGECEFFMISEMRSQLIVFQPYRTITALRNELSLVDDEV-QLARSVI 178
Query: 413 NDTYRMDLILTHPPYLITLACIYVASVYK 327
ND + DL L +PP++I + I +A V +
Sbjct: 179 NDHFMTDLPLLYPPHIIAMVAILLALVLR 207
>sp|A4RD79|SSN8_MAGGR RNA polymerase II holoenzyme cyclin-like subunit
OS=Magnaporthe grisea GN=SSN8 PE=3 SV=1
Length = 363
Score = 96 bits (238), Expect = 3e-019
Identities = 60/165 (36%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Frame = -2
Query: 806 HMSNYIS----KLAQHIKIRQRVVATAITYMRRVYTRKSLTEYEPRLVAPTCLYLACKAE 639
H+ NY + +LA+++ IRQ+ +ATA YM+R YTR + P LV T +YLACK E
Sbjct: 46 HLYNYFNYQMLRLAKNLSIRQQAIATAQVYMKRFYTRVEIRSTNPTLVLVTAVYLACKME 105
Query: 638 ESVVHAKILVFYIRKLYADEKFRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEFLQDS 459
E +H + + +K++ E EI I E E ++ ++ L+V PYR+L QD
Sbjct: 106 EMPLHIRNVSLEAKKVWPMETPSLEIAKIGECEFWLISEMSAQLIVHQPYRTLTALQQDF 165
Query: 458 GL-NDTSMTHLTWGIVNDTYRMDLILTHPPYLITLACIYVASVYK 327
L ND + L +ND + DL L + P+ I LA I +A V +
Sbjct: 166 QLANDDHV--LAVSFLNDHFMTDLPLLYAPHTIALAAIMLALVLR 208
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,378,909,851
Number of Sequences: 518415
Number of Extensions: 78378909851
Number of Successful Extensions: 523441567
Number of sequences better than 0.0: 0
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