BLASTX 7.6.2
Query= UN19247 /QuerySize=617
(616 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S... 234 5e-062
TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S... 234 5e-062
TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S... 234 5e-062
TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S... 231 2e-061
TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S... 231 2e-061
TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S... 231 2e-061
TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S... 52 3e-007
>TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 234 bits (595), Expect = 5e-062
Identities = 117/123 (95%)
Frame = +2
Query: 104 MAYAAMKPTKAGLEEPLEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRTKGPVRMP 283
MAY MKPTKAGLE PLEQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLR KGPVRMP
Sbjct: 1 MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60
Query: 284 TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 463
TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61 TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 120
Query: 464 DS* 472
DS*
Sbjct: 121 DS* 123
>TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 234 bits (595), Expect = 5e-062
Identities = 117/123 (95%)
Frame = +2
Query: 104 MAYAAMKPTKAGLEEPLEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRTKGPVRMP 283
MAY MKPTKAGLE PLEQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLR KGPVRMP
Sbjct: 1 MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60
Query: 284 TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 463
TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61 TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 120
Query: 464 DS* 472
DS*
Sbjct: 121 DS* 123
>TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 234 bits (595), Expect = 5e-062
Identities = 117/123 (95%)
Frame = +2
Query: 104 MAYAAMKPTKAGLEEPLEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRTKGPVRMP 283
MAY MKPTKAGLE PLEQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLR KGPVRMP
Sbjct: 1 MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60
Query: 284 TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 463
TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61 TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 120
Query: 464 DS* 472
DS*
Sbjct: 121 DS* 123
>TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S20 (RPS20A) |
chr3:16471606-16472312 REVERSE
Length = 125
Score = 231 bits (589), Expect = 2e-061
Identities = 116/122 (95%)
Frame = +2
Query: 107 AYAAMKPTKAGLEEPLEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRTKGPVRMPT 286
AY MKP KAGLEEPLEQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLR KGPVRMPT
Sbjct: 4 AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63
Query: 287 KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 466
KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD
Sbjct: 64 KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 123
Query: 467 S* 472
S*
Sbjct: 124 S* 125
>TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 231 bits (589), Expect = 2e-061
Identities = 116/122 (95%)
Frame = +2
Query: 107 AYAAMKPTKAGLEEPLEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRTKGPVRMPT 286
AY MKP KAGLEEPLEQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLR KGPVRMPT
Sbjct: 4 AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63
Query: 287 KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 466
KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD
Sbjct: 64 KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 123
Query: 467 S* 472
S*
Sbjct: 124 S* 125
>TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 231 bits (589), Expect = 2e-061
Identities = 116/122 (95%)
Frame = +2
Query: 107 AYAAMKPTKAGLEEPLEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRTKGPVRMPT 286
AY MKP KAGLEEPLEQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLR KGPVRMPT
Sbjct: 4 AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63
Query: 287 KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 466
KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD
Sbjct: 64 KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 123
Query: 467 S* 472
S*
Sbjct: 124 S* 125
>TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S10,
chloroplast, putative | chr3:4220310-4221526 REVERSE
Length = 192
Score = 52 bits (122), Expect = 3e-007
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Frame = +2
Query: 167 KIRITLSSKNVKNLEKVCADLVRGAKDKRLRTKGPVRMPTKVLKITTRKAPCGEGTNTWD 346
KIRI L S V +E C ++ A++ +T GPV +PTK K+P +
Sbjct: 94 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 152
Query: 347 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 460
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 153 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,016,063,873
Number of Sequences: 33410
Number of Extensions: 10016063873
Number of Successful Extensions: 333391426
Number of sequences better than 0.0: 0
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