BLASTX 7.6.2
Query= UN19328 /QuerySize=1712
(1711 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.0... 217 3e-055
sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator ... 215 8e-055
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P... 147 4e-034
sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 P... 139 6e-032
sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapie... 137 4e-031
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 P... 135 1e-030
sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=... 97 3e-019
sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic ... 94 4e-018
sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN... 89 9e-017
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=... 80 4e-014
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=... 80 4e-014
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=... 80 4e-014
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa... 77 3e-013
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 76 6e-013
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropical... 70 6e-011
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RB... 69 7e-011
sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=... 69 7e-011
sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=... 69 7e-011
sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus ... 69 7e-011
>sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c
OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2
Length = 473
Score = 217 bits (551), Expect = 3e-055
Identities = 124/289 (42%), Positives = 172/289 (59%), Gaps = 12/289 (4%)
Frame = -1
Query: 1234 TLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLTRSAAEEVLQS 1055
TLW+G+L W+ E ++ ++ + VK+IRN+ T + GY FVEF + A + S
Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-S 152
Query: 1054 YSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFAA-YQ 878
+ +P F+LNWAS G + S + + S+FVGDL+P+V + + FA+ Y
Sbjct: 153 MNNKPIPGTNHLFKLNWAS-GGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYN 211
Query: 877 SVKGAKVLIDSNTGRSKGYGFVRFGDESERSKALTEMNGAFCSSRQMRVGVATPK-RAAA 701
S K AK++ D T S+GYGFVRF DE+++ AL EM G C R +RVG+ATPK +A
Sbjct: 212 SCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKAHV 271
Query: 700 YGQQNGSQALTLAGGHGGNGSMAD-----GESNNSTIFVGGLDADVTEEDLMQPFSQFGE 536
+ N + ++ G S A ++ NST+FVGGL V+EE+L F FGE
Sbjct: 272 FSPVN---VVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFGE 328
Query: 535 VVSVKIPVGKGCGFVQFGNRQSAEEAIGNLNGTVIGKNTVRLSWGRSPN 389
+V VKIP GKGCGFVQF NRQSAE AI L G +G + +RLSWGR+ N
Sbjct: 329 IVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRNQN 377
>sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator csx1
OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1
Length = 632
Score = 215 bits (547), Expect = 8e-055
Identities = 114/299 (38%), Positives = 172/299 (57%), Gaps = 7/299 (2%)
Frame = -1
Query: 1279 QQERGGGSGGGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSE--GY 1106
Q G GS D TLW+GDL WMD T++ ++ N+ +VKV+R+K +S Y
Sbjct: 74 QDVAGVGSKMSD---TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISY 130
Query: 1105 GFVEFLTRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLA 926
FV+F + +AAE L Y+ +P A F+LNWA+ + + P+ S+FVGDL
Sbjct: 131 CFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLL 190
Query: 925 PDVTDTLLMETF-AAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESERSKALTEMNGAFCS 749
P D+ L TF + Y S AK+++D TG S+ YGFVRF E E+ AL M G C
Sbjct: 191 PTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQ 250
Query: 748 SRQMRVGVATPKRAAAYGQQNGSQAL-TLAGGHGGNGSMADGESNNSTIFVGGLDADVTE 572
R +R+ VA+PK A+ + + T N + + N+T+FVGGL ++++E
Sbjct: 251 GRPLRISVASPKSRASIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLSE 310
Query: 571 EDLMQPFSQFGEVVSVKIPVGKGCGFVQFGNRQSAEEAIGNLNGTVIGKNTVRLSWGRS 395
+DL F FG ++++KIP GKGCGFVQ+ + +AE+AI + G ++G + +RL+WG +
Sbjct: 311 KDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHN 369
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 147 bits (369), Expect = 4e-034
Identities = 93/317 (29%), Positives = 158/317 (49%), Gaps = 20/317 (6%)
Frame = -1
Query: 1237 KTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLTRSAAEEVLQ 1058
+TL++G+L + E + FS S K+I + + ++ Y FVEF A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMI--TEHTSNDPYCFVEFYEHRDAAAALA 66
Query: 1057 SYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFAAYQ 878
+ +G + E ++NWA+ + +K+ + N+ +FVGDL+P++T + FA +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKKDTSNH---FHVFVGDLSPEITTEDIKSAFAPFG 121
Query: 877 SVKGAKVLIDSNTGRSKGYGFVRFGDESERSKALTEMNGAFCSSRQMRVGVATPKRAAAY 698
+ A+V+ D TG+SKGYGFV F ++ + A+ M G + RQ+R AT K A
Sbjct: 122 KISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPK 181
Query: 697 G-QQNGSQALTLAGGHGGNGSMADGESNNSTIFVGGLDADVTEEDLMQPFSQFGEVVSVK 521
Q+N ++ L + N T++ GG+ + +T++ + Q FS FG+++ ++
Sbjct: 182 STQENNTKQLRF------EDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR 235
Query: 520 IPVGKGCGFVQFGNRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRN------DSGHQ 359
+ KG FV+F +SA AI ++NGT I + V+ WG+ +N Q
Sbjct: 236 VFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQ 295
Query: 358 WNGGYSRGQGYNNGYAN 308
W+ Y Q Y AN
Sbjct: 296 WSQVYGNPQQYGQYMAN 312
>sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1
Length = 386
Score = 139 bits (350), Expect = 6e-032
Identities = 85/289 (29%), Positives = 155/289 (53%), Gaps = 19/289 (6%)
Frame = -1
Query: 1237 KTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLTRSAAEEVLQ 1058
KTL++G+L + E + FS + K+I + T+ ++ Y FVEF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 1057 SYSGVTMPNAEQPFRLNWASFSTGEKR--------ASENNGPDLSLFVGDLAPDVTDTLL 902
+ +G + E ++NWA+ + +K+ +++ + +FVGDL+P++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 901 METFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESERSKALTEMNGAFCSSRQMRVGVA 722
FA + + A+V+ D TG+SKGYGFV F ++ + A+ +M G + RQ+R A
Sbjct: 123 KAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Query: 721 TPKRAAAYG-QQNGSQALTLAGGHGGNGSMADGESNNSTIFVGGLDADVTEEDLMQPFSQ 545
T K A ++ ++ L+ + ++ NN T++ GG+ + +TE+ + Q FS
Sbjct: 183 TRKPPAPKSTYESNTKQLSY------DEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSP 236
Query: 544 FGEVVSVKIPVGKGCGFVQFGNRQSAEEAIGNLNGTVIGKNTVRLSWGR 398
FG+++ +++ KG FV+F + +SA AI ++NGT I + V+ WG+
Sbjct: 237 FGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1
SV=3
Length = 386
Score = 137 bits (343), Expect = 4e-031
Identities = 87/288 (30%), Positives = 151/288 (52%), Gaps = 17/288 (5%)
Frame = -1
Query: 1237 KTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLTRSAAEEVLQ 1058
KTL++G+L + E + FS + K+I + T+ ++ Y FVEF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 1057 SYSGVTMPNAEQPFRLNWASFSTGEKR--------ASENNGPDLSLFVGDLAPDVTDTLL 902
+ +G + E ++NWA+ + +K+ +++ + +FVGDL+P++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 901 METFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESERSKALTEMNGAFCSSRQMRVGVA 722
FA + + A+V+ D TG+SKGYGFV F ++ + A+ +M G + RQ+R A
Sbjct: 123 KAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Query: 721 TPKRAAAYGQQNGSQALTLAGGHGGNGSMADGESNNSTIFVGGLDADVTEEDLMQPFSQF 542
T K A S L+ N S +N T++ GG+ + +TE+ + Q FS F
Sbjct: 183 TRKPPAPKSTYE-SNTKQLSYDEVVNQS----SPSNCTVYCGGVTSGLTEQLMRQTFSPF 237
Query: 541 GEVVSVKIPVGKGCGFVQFGNRQSAEEAIGNLNGTVIGKNTVRLSWGR 398
G+++ +++ KG FV+F + +SA AI ++NGT I + V+ WG+
Sbjct: 238 GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1
Length = 392
Score = 135 bits (338), Expect = 1e-030
Identities = 83/281 (29%), Positives = 140/281 (49%), Gaps = 18/281 (6%)
Frame = -1
Query: 1129 QTSQSEGYGFVEFLTRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDL 950
Q + ++ Y FVEF A L + +G + E ++NWA+ + +K+ + N+
Sbjct: 60 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNH---F 114
Query: 949 SLFVGDLAPDVTDTLLMETFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESERSKALTE 770
+FVGDL+P++T + FA + + A+V+ D TG+SKGYGFV F ++ + A+
Sbjct: 115 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 174
Query: 769 MNGAFCSSRQMRVGVATPKRAAAYG-QQNGSQALTLAGGHGGNGSMADGESNNSTIFVGG 593
M G + RQ+R AT K A Q+ ++ L + N T++ GG
Sbjct: 175 MGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRF------EDVVNQSSPKNCTVYCGG 228
Query: 592 LDADVTEEDLMQPFSQFGEVVSVKIPVGKGCGFVQFGNRQSAEEAIGNLNGTVIGKNTVR 413
+ + +T++ + Q FS FG+++ +++ KG FV+F +SA AI ++NGT I + V+
Sbjct: 229 IASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 288
Query: 412 LSWGRSPNKQWRN------DSGHQWNGGYSRGQGYNNGYAN 308
WG+ +N QW+ Y Q Y AN
Sbjct: 289 CYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMAN 329
>sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=Saccharomyces
cerevisiae GN=NGR1 PE=1 SV=2
Length = 672
Score = 97 bits (240), Expect = 3e-019
Identities = 60/150 (40%), Positives = 84/150 (56%), Gaps = 8/150 (5%)
Frame = -1
Query: 1042 TMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETF-AAYQSVKG 866
T P ++ FRLNWAS +T ++S + P+ SLFVGDL+P T+ L+ F ++SVK
Sbjct: 164 TNPTFKRTFRLNWASGAT--LQSSIPSTPEFSLFVGDLSPTATEADLLSLFQTRFKSVKT 221
Query: 865 AKVLIDSNTGRSKGYGFVRFGDESERSKALTEMNGAFCSSRQMRVGVATPKRAAAYG-QQ 689
+V+ D TG S+ +GFVRFGDE ER +AL EM+G + R +RV ATP+ Q+
Sbjct: 222 VRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATPRNNMMLQLQE 281
Query: 688 NGSQALTLAGGHGGNGSMADGESNNSTIFV 599
Q L H D E NN + +
Sbjct: 282 QQQQQQQLQQQH----QQLDQEDNNGPLLI 307
Score = 79 bits (192), Expect = 1e-013
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = -1
Query: 625 ESNNSTIFVGGLDADVTEEDLMQPFSQFGEVVSVKIPVGKGCGFVQFGNRQSAEEAIGNL 446
+ N+T+FVGGL TE L F FG +++V+IP GK CGFV+F R AE +I L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 445 NGTVIGKNTVRLSWGRSPNKQWRNDS 368
G ++G + +RLSWGR + + +S
Sbjct: 416 QGFIVGGSPIRLSWGRPSSSNAKTNS 441
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis
thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 94 bits (231), Expect = 4e-018
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Frame = -1
Query: 955 DLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESERSKAL 776
DL LFVG+L +V L + F + +V+ +V+ D TGRS+G+GFV SE A
Sbjct: 90 DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAA 149
Query: 775 TEMNGAFCSSRQMRV--GVATPKRAAAYGQQNGSQALTLAGGHGGNGSMADGESNNSTIF 602
+ NG R +RV G PKR + + S + G+GG G G N ++
Sbjct: 150 QQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNR--VY 207
Query: 601 VGGLDADVTEEDLMQPFSQFGEVVSVKIPV------GKGCGFVQFGNRQSAEEAIGNLNG 440
VG L V + L FS+ G+VV ++ KG GFV + + Q + AI +L+G
Sbjct: 208 VGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDG 267
Query: 439 TVIGKNTVRLS--WGRSPNKQW 380
+ +R+S R P +Q+
Sbjct: 268 ADLDGRQIRVSEAEARPPRRQY 289
>sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1
SV=2
Length = 523
Score = 89 bits (219), Expect = 9e-017
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = -1
Query: 625 ESNNSTIFVGGLDADVTEEDLMQPFSQFGEVVSVKIPVGKGCGFVQFGNRQSAEEAIGNL 446
+ NN+T+F+GGL + VTE++L F FG +V VKIPVGK CGFVQ+ +R SAE AI +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGM 368
Query: 445 NGTVIGKNTVRLSWGRS 395
G I + VRLSWGRS
Sbjct: 369 QGFPIANSRVRLSWGRS 385
>sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1
SV=2
Length = 530
Score = 80 bits (196), Expect = 4e-014
Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 8/186 (4%)
Frame = -1
Query: 1243 DVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLTRSAAEEV 1064
D +T++ L + L FS +V V++I ++ + +S+G +VEF+ S+
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 1063 L----QSYSGV-TMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLM 899
+ Q GV + A Q + A+ + ++ S GP + L+VG L ++T+ +L
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA--GP-MRLYVGSLHFNITEDMLR 267
Query: 898 ETFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESERSKALTEMNGAFCSSRQMRVGVAT 719
F + ++ ++++DS TGRSKGYGF+ F D KAL ++NG + R M+VG T
Sbjct: 268 GIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVT 327
Query: 718 PKRAAA 701
+ A+
Sbjct: 328 ERTDAS 333
>sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1
SV=1
Length = 530
Score = 80 bits (196), Expect = 4e-014
Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Frame = -1
Query: 1243 DVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLTRSAAEEV 1064
D +T++ L + L FS +V V++I ++ + +S G +VEF+ S+
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLA 210
Query: 1063 L----QSYSGV-TMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLM 899
+ Q GV + A Q + A+ + ++ S GP + L+VG L ++T+ +L
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA--GP-MRLYVGSLHFNITEDMLR 267
Query: 898 ETFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESERSKALTEMNGAFCSSRQMRVGVAT 719
F + ++ ++++DS TGRSKGYGF+ F D KAL ++NG + R M+VG T
Sbjct: 268 GIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVT 327
Query: 718 PKRAAA 701
+ A+
Sbjct: 328 ERTDAS 333
>sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2
SV=1
Length = 524
Score = 80 bits (196), Expect = 4e-014
Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 8/186 (4%)
Frame = -1
Query: 1243 DVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLTRSAAEEV 1064
D +T++ L + L FS +V V++I ++ + +S+G +VEF+ S+
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 1063 L----QSYSGV-TMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLM 899
+ Q GV + A Q + A+ + ++ S GP + L+VG L ++T+ +L
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA--GP-MRLYVGSLHFNITEDMLR 267
Query: 898 ETFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESERSKALTEMNGAFCSSRQMRVGVAT 719
F + ++ ++++DS TGRSKGYGF+ F D KAL ++NG + R M+VG T
Sbjct: 268 GIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVT 327
Query: 718 PKRAAA 701
+ A+
Sbjct: 328 ERTDAS 333
>sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sapiens GN=RBM23
PE=1 SV=1
Length = 439
Score = 77 bits (188), Expect = 3e-013
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Frame = -1
Query: 1243 DVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTSQSEGYGFVEFLTRSAAEEV 1064
D +T++ L + L FS +V V++I ++ + +S+G +VEF +
Sbjct: 164 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA 223
Query: 1063 L----QSYSGVTMPNAEQPFRLNWASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLME 896
+ Q GV P Q + + + NG + L+VG L ++T+ +L
Sbjct: 224 IGLTGQRLLGV--PIIVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRG 281
Query: 895 TFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESERSKALTEMNGAFCSSRQMRVGVATP 716
F + + ++ DS+TGRSKGYGF+ F D +AL ++NG + R MRVG T
Sbjct: 282 IFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTE 341
Query: 715 K 713
+
Sbjct: 342 R 342
>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
Length = 158
Score = 76 bits (186), Expect = 6e-013
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Frame = -1
Query: 946 LFVGDLAPDVTDTLLMETFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESERSKALTEM 767
LF+G L+ D L + FA + V AKV++D TGRS+G+GFV F DE + A++EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 766 NGAFCSSRQMRVGVAT--PKRAAAYGQQNGSQALTLAGGHGGNGSMADGESNNSTIFVGG 593
+G + R +RV A P AYG G +GG GG G G + GG
Sbjct: 97 DGKELNGRHIRVNPANDRPSAPRAYGGGGG-----YSGGGGGYGGGGGGYGGGGGGYGGG 151
Query: 592 LD 587
D
Sbjct: 152 GD 153
>sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42
PE=2 SV=1
Length = 392
Score = 70 bits (169), Expect = 6e-011
Identities = 35/91 (38%), Positives = 52/91 (57%)
Frame = -1
Query: 1003 ASFSTGEKRASENNGPDLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVLIDSNTGRSKG 824
A S ++ E D +F GDL +V D +L F+ Y S AKV+ D TG++KG
Sbjct: 276 AGTSWEDQSLLEWESDDFRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKG 335
Query: 823 YGFVRFGDESERSKALTEMNGAFCSSRQMRV 731
YGFV F D ++ +A+ EMNG + SR +++
Sbjct: 336 YGFVSFKDPNDYVRAMREMNGKYVGSRPIKL 366
>sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1
Length = 448
Score = 69 bits (168), Expect = 7e-011
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = -1
Query: 970 ENNGPDLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESE 791
E + D +F GDL +V D +L F+ + S AKV+ D TG++KGYGFV F D S+
Sbjct: 343 EWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSD 402
Query: 790 RSKALTEMNGAFCSSRQMRV 731
+A+ EMNG + SR +++
Sbjct: 403 YVRAMREMNGKYVGSRPIKL 422
>sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1
SV=1
Length = 480
Score = 69 bits (168), Expect = 7e-011
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = -1
Query: 970 ENNGPDLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESE 791
E + D +F GDL +V D +L F+ + S AKV+ D TG++KGYGFV F D S+
Sbjct: 375 EWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSD 434
Query: 790 RSKALTEMNGAFCSSRQMRV 731
+A+ EMNG + SR +++
Sbjct: 435 YVRAMREMNGKYVGSRPIKL 454
>sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 69 bits (168), Expect = 7e-011
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = -1
Query: 970 ENNGPDLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESE 791
E + D +F GDL +V D +L F+ + S AKV+ D TG++KGYGFV F D S+
Sbjct: 369 EWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSD 428
Query: 790 RSKALTEMNGAFCSSRQMRV 731
+A+ EMNG + SR +++
Sbjct: 429 YVRAMREMNGKYVGSRPIKL 448
>sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 69 bits (168), Expect = 7e-011
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = -1
Query: 970 ENNGPDLSLFVGDLAPDVTDTLLMETFAAYQSVKGAKVLIDSNTGRSKGYGFVRFGDESE 791
E + D +F GDL +V D +L F+ + S AKV+ D TG++KGYGFV F D S+
Sbjct: 369 EWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSD 428
Query: 790 RSKALTEMNGAFCSSRQMRV 731
+A+ EMNG + SR +++
Sbjct: 429 YVRAMREMNGKYVGSRPIKL 448
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,908,948,754
Number of Sequences: 518415
Number of Extensions: 78908948754
Number of Successful Extensions: 532487479
Number of sequences better than 0.0: 0
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