BLASTX 7.6.2
Query= UN19329 /QuerySize=1157
(1156 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30680456|ref|NP_850539.1| RNA recognition motif-containing pr... 331 1e-088
gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT... 331 2e-088
gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protei... 325 1e-086
gi|18398061|ref|NP_566321.1| RNA recognition motif-containing pr... 325 1e-086
gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabido... 325 1e-086
gi|228950948|ref|ZP_04113069.1| hypothetical protein bthur0006_3... 86 8e-015
gi|229143183|ref|ZP_04271615.1| hypothetical protein bcere0012_3... 84 3e-014
gi|218895514|ref|YP_002443925.1| lpxtg-motif cell wall anchor do... 83 9e-014
gi|206974200|ref|ZP_03235117.1| lpxtg-motif cell wall anchor dom... 83 9e-014
gi|222094192|ref|YP_002528249.1| lpxtg-motif cell wall anchor do... 76 1e-011
gi|217957992|ref|YP_002336536.1| lpxtg-motif cell wall anchor do... 74 5e-011
>gi|30680456|ref|NP_850539.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 495
Score = 331 bits (848), Expect = 1e-088
Identities = 168/203 (82%), Positives = 173/203 (85%), Gaps = 11/203 (5%)
Frame = +3
Query: 6 GYEGGNGGGGGGSSSFFSSVTRNLWGNNGGLNYNNNNGANSNSNTYMGGTASGNNALSGP 185
GYEGGN GGG+SSFFSSVTRNLWGNNGGLNYNNNN NSNSNTYMGG++SGNN LSGP
Sbjct: 298 GYEGGN---GGGNSSFFSSVTRNLWGNNGGLNYNNNN-TNSNSNTYMGGSSSGNNTLSGP 353
Query: 186 FGNWGAAPGGGGGGNNGVGNENLKFGYGGNGESGFGLGT-----RNIGPSKAAPSSSFSS 350
FGN G G GGGNN V NEN+KFGYGGNGESGFGLGT RN G +KAAPSSSFSS
Sbjct: 354 FGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSS 413
Query: 351 ASGTNNTGYDGAGLAEFYGNGAVYSDPTWRSSAPETEGPGSFSYGIGGGGVGPSSDVSAR 530
AS TNNTGYD AGLAEFYGNGAVYSDPTWRS PETEGP FSYGIGGG PSSDVSAR
Sbjct: 414 ASATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGG--VPSSDVSAR 471
Query: 531 SSSPGYVGSYSVNKRQPNRGEPS 599
SSSPGYVGSYSVNKRQPNRGEPS
Sbjct: 472 SSSPGYVGSYSVNKRQPNRGEPS 494
>gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119
[Arabidopsis lyrata subsp. lyrata]
Length = 495
Score = 331 bits (847), Expect = 2e-088
Identities = 168/203 (82%), Positives = 173/203 (85%), Gaps = 11/203 (5%)
Frame = +3
Query: 6 GYEGGNGGGGGGSSSFFSSVTRNLWGNNGGLNYNNNNGANSNSNTYMGGTASGNNALSGP 185
GYEGGN GGG+SSFFSSVTRNLWGNNGGLNYNNN NSNSNTYMGG++S NN LSGP
Sbjct: 298 GYEGGN---GGGNSSFFSSVTRNLWGNNGGLNYNNNT-TNSNSNTYMGGSSSVNNTLSGP 353
Query: 186 FGNWGAAPGGGGGGNNGVGNENLKFGYGGNGESGFGLGT-----RNIGPSKAAPSSSFSS 350
FGN G G GGGNN V NEN+KFGYGGNGESGFGLGT RN G +KAAPSSSFSS
Sbjct: 354 FGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSS 413
Query: 351 ASGTNNTGYDGAGLAEFYGNGAVYSDPTWRSSAPETEGPGSFSYGIGGGGVGPSSDVSAR 530
AS TNNTGYD AGLAEFYGNGAVYSDPTWRS PETEGP SFSYGIGGG GPSSDVSAR
Sbjct: 414 ASATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPASFSYGIGGG--GPSSDVSAR 471
Query: 531 SSSPGYVGSYSVNKRQPNRGEPS 599
SSSPGYVGSYSVNKRQPNRGEPS
Sbjct: 472 SSSPGYVGSYSVNKRQPNRGEPS 494
>gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protein [Arabidopsis
thaliana]
Length = 492
Score = 325 bits (832), Expect = 1e-086
Identities = 165/200 (82%), Positives = 170/200 (85%), Gaps = 11/200 (5%)
Frame = +3
Query: 6 GYEGGNGGGGGGSSSFFSSVTRNLWGNNGGLNYNNNNGANSNSNTYMGGTASGNNALSGP 185
GYEGGN GGG+SSFFSSVTRNLWGNNGGLNYNNNN NSNSNTYMGG++SGNN LSGP
Sbjct: 298 GYEGGN---GGGNSSFFSSVTRNLWGNNGGLNYNNNN-TNSNSNTYMGGSSSGNNTLSGP 353
Query: 186 FGNWGAAPGGGGGGNNGVGNENLKFGYGGNGESGFGLGT-----RNIGPSKAAPSSSFSS 350
FGN G G GGGNN V NEN+KFGYGGNGESGFGLGT RN G +KAAPSSSFSS
Sbjct: 354 FGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSS 413
Query: 351 ASGTNNTGYDGAGLAEFYGNGAVYSDPTWRSSAPETEGPGSFSYGIGGGGVGPSSDVSAR 530
AS TNNTGYD AGLAEFYGNGAVYSDPTWRS PETEGP FSYGIGGG PSSDVSAR
Sbjct: 414 ASATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGG--VPSSDVSAR 471
Query: 531 SSSPGYVGSYSVNKRQPNRG 590
SSSPGYVGSYSVNKRQPNRG
Sbjct: 472 SSSPGYVGSYSVNKRQPNRG 491
>gi|18398061|ref|NP_566321.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 494
Score = 325 bits (832), Expect = 1e-086
Identities = 165/200 (82%), Positives = 170/200 (85%), Gaps = 11/200 (5%)
Frame = +3
Query: 6 GYEGGNGGGGGGSSSFFSSVTRNLWGNNGGLNYNNNNGANSNSNTYMGGTASGNNALSGP 185
GYEGGN GGG+SSFFSSVTRNLWGNNGGLNYNNNN NSNSNTYMGG++SGNN LSGP
Sbjct: 298 GYEGGN---GGGNSSFFSSVTRNLWGNNGGLNYNNNN-TNSNSNTYMGGSSSGNNTLSGP 353
Query: 186 FGNWGAAPGGGGGGNNGVGNENLKFGYGGNGESGFGLGT-----RNIGPSKAAPSSSFSS 350
FGN G G GGGNN V NEN+KFGYGGNGESGFGLGT RN G +KAAPSSSFSS
Sbjct: 354 FGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSS 413
Query: 351 ASGTNNTGYDGAGLAEFYGNGAVYSDPTWRSSAPETEGPGSFSYGIGGGGVGPSSDVSAR 530
AS TNNTGYD AGLAEFYGNGAVYSDPTWRS PETEGP FSYGIGGG PSSDVSAR
Sbjct: 414 ASATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGG--VPSSDVSAR 471
Query: 531 SSSPGYVGSYSVNKRQPNRG 590
SSSPGYVGSYSVNKRQPNRG
Sbjct: 472 SSSPGYVGSYSVNKRQPNRG 491
>gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 494
Score = 325 bits (832), Expect = 1e-086
Identities = 165/200 (82%), Positives = 170/200 (85%), Gaps = 11/200 (5%)
Frame = +3
Query: 6 GYEGGNGGGGGGSSSFFSSVTRNLWGNNGGLNYNNNNGANSNSNTYMGGTASGNNALSGP 185
GYEGGN GGG+SSFFSSVTRNLWGNNGGLNYNNNN NSNSNTYMGG++SGNN LSGP
Sbjct: 298 GYEGGN---GGGNSSFFSSVTRNLWGNNGGLNYNNNN-TNSNSNTYMGGSSSGNNTLSGP 353
Query: 186 FGNWGAAPGGGGGGNNGVGNENLKFGYGGNGESGFGLGT-----RNIGPSKAAPSSSFSS 350
FGN G G GGGNN V NEN+KFGYGGNGESGFGLGT RN G +KAAPSSSFSS
Sbjct: 354 FGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSS 413
Query: 351 ASGTNNTGYDGAGLAEFYGNGAVYSDPTWRSSAPETEGPGSFSYGIGGGGVGPSSDVSAR 530
AS TNNTGYD AGLAEFYGNGAVYSDPTWRS PETEGP FSYGIGGG PSSDVSAR
Sbjct: 414 ASATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGG--VPSSDVSAR 471
Query: 531 SSSPGYVGSYSVNKRQPNRG 590
SSSPGYVGSYSVNKRQPNRG
Sbjct: 472 SSSPGYVGSYSVNKRQPNRG 491
>gi|228950948|ref|ZP_04113069.1| hypothetical protein bthur0006_3790 [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 319
Score = 86 bits (212), Expect = 8e-015
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Frame = +3
Query: 12 EGGNGGGGGGSSSFFSSVTRNLWGNNGGLNYNNNNGANSNSNTYMGGTASGNNALSGPFG 191
+ G+GG G G + + + GN+ G N ++ +G N + G +G++ S G
Sbjct: 63 DSGSGGSGSGENGSGENGSGGFGGNSSGGNGSDGSGPGGNGSDDNGSGGNGSSG-SDSGG 121
Query: 192 NWGAAPGGGGGGNNGV-GNENLKFGYGGNGESGFGLGTRNIGPSKAAPSSSFSSASGTNN 368
+ G GG G G +G GN++ G GGNG SG G G G S + S S + SG+N
Sbjct: 122 SGGNGSGGNGSGGSGPGGNDSGGDGSGGNGSSGSGSGENGSGGSGSGGSGSGGNGSGSNG 181
Query: 369 TGYDGAGLAEFYGNGAVYSDPTWRSSAPETEGPG-SFSYGIGGGGVGPSSDVSARSSSPG 545
+G G+G GNG+ S P S G S S G GG G G + RS G
Sbjct: 182 SGGSGSGGNGSGGNGSGGSGPGGNGSGDNGSGGNRSGSNGSGGSGSGGNGSGGNRSGGDG 241
Query: 546 YVGSYS 563
GS S
Sbjct: 242 SGGSGS 247
>gi|229143183|ref|ZP_04271615.1| hypothetical protein bcere0012_3560 [Bacillus
cereus BDRD-ST24]
Length = 340
Score = 84 bits (207), Expect = 3e-014
Identities = 62/177 (35%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Frame = +3
Query: 15 GGNGGGGGGSSSFFSSVTRNLWGNNGGLNYNNNNGANSNSNTYMGGTASGNNALSGPFGN 194
GGNG GG GS S GN G N + +NG+ N + G SG SG G+
Sbjct: 67 GGNGSGGNGSGGSGSG------GNGSGGNGSGDNGSGGNGSGGSGSDGSG----SGGNGS 116
Query: 195 WGAAPGGGGGGNNGVGNENLKFGYGGNGESGFGLGTRNIGPSKAAPSSSFSSASGTNNTG 374
G GG G G NG G+ G GGNG G G G G + + + S S SG N +G
Sbjct: 117 GGNGSGGNGSGGNGSGDS----GSGGNGSGGNGSGGSGSGGNGSGGNGSGGSGSGDNGSG 172
Query: 375 YDGAGLAEFYGNGAVYSDPTWRSSAPETEGPGSFSYGIGGGGVGPSSDVSARSSSPG 545
+G+G + GNG+ + S G G+ S G G GG G + S + S G
Sbjct: 173 GNGSGGSGSGGNGSGSNGSGGNGSGGNGSG-GNGSGGNGSGGNGSGGNGSGGNGSGG 228
>gi|218895514|ref|YP_002443925.1| lpxtg-motif cell wall anchor domain protein
[Bacillus cereus G9842]
Length = 347
Score = 83 bits (203), Expect = 9e-014
Identities = 65/182 (35%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Frame = +3
Query: 15 GGNGGGGGGS----SSFFSSVTRNLWGNNGGLNYNNNNGANSNSNTYMGGTASGNNALSG 182
GG+G GG GS S S GN G N + NG+ N + GG+ SG N SG
Sbjct: 77 GGSGSGGSGSGDNGSGGNGSGGSGSGGNGSGGNGSGGNGSGGNGS---GGSGSGGNG-SG 132
Query: 183 PFGNWGAAPGGGGGGNNGVGNENL-KFGYGGNGESGFGLGTRNIGPSKAAPSSSFSSASG 359
G+ G GG G G NG G + G GGNG G G G + G + + SSS + SG
Sbjct: 133 GNGSGGNGSGGNGSGGNGSGGSSSGDNGSGGNGSGGNGSGGSSSGDNGSGGSSSGDNGSG 192
Query: 360 TNNTGYDGAGLAEFYGNGAVYSDPTWRSSAPETEGPGSFSYGIGGGGVGPSSDVSARSSS 539
N +G +G+G GNG+ + S G G+ S G G GG G + S + S
Sbjct: 193 GNGSGGNGSGGNGSGGNGSGGNGSGGNGSGGNGSG-GNGSGGNGSGGNGSGGNGSGGNGS 251
Query: 540 PG 545
G
Sbjct: 252 GG 253
>gi|206974200|ref|ZP_03235117.1| lpxtg-motif cell wall anchor domain protein
[Bacillus cereus H3081.97]
Length = 341
Score = 83 bits (203), Expect = 9e-014
Identities = 60/185 (32%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Frame = +3
Query: 3 GGYEGGNGGGGGGSSSFFSSVTRNLWGNNGGLNYNNNNGANSNSNTYMGGTASGNNALSG 182
G GNG GG GSS S GN N + NG++ + + GG +SG N SG
Sbjct: 98 GNGSDGNGSGGNGSSGSDGS---GSGGNGSDGNGSGGNGSSGSDGSGSGGNSSGGNGSSG 154
Query: 183 PFGNWGAAPGGGGGGNNGVGNENLKFGYGGNGESGFGLGTRNIGPSKAAPSSSFSSASGT 362
+ + G G GGN G+ + G GGNG G G G G S + S S ++SG
Sbjct: 155 SGSDGSGSGGNGSGGNGSSGSGSDGSGSGGNGSGGNGSGGNGSGGSGSDGSGSGGNSSGG 214
Query: 363 NNTGYDGAGLAEFYGNGAVYSDPTWRSSAPETEGPGSFSYGIGGGGVGPSSDVSARSSSP 542
+ +G +G+G GNG+ S S G G+ S G G GG D S++ +
Sbjct: 215 SGSGGNGSG-----GNGSGGSGSGDNGSGGNGSG-GNGSGGNGSGGNRGKGDSSSQGGND 268
Query: 543 GYVGS 557
+ G+
Sbjct: 269 SHGGN 273
>gi|222094192|ref|YP_002528249.1| lpxtg-motif cell wall anchor domain protein
[Bacillus cereus Q1]
Length = 402
Score = 76 bits (185), Expect = 1e-011
Identities = 57/182 (31%), Positives = 76/182 (41%), Gaps = 12/182 (6%)
Frame = +3
Query: 18 GNGGGGGGSSSFFSSVTRNLWGNNGGLNYNNNNGANSNSNTYMGGTASGNNALSGPFGNW 197
GNGG S S GN G N ++ NG+ N + G SG N G
Sbjct: 56 GNGGSQDDSGS---------GGNGSGGNGSDGNGSGGNGS---DGNGSGGNGSGGNGSGG 103
Query: 198 GAAPGGGGGGNNGVGNENLKFGYGGNGESGFGLGTRNIGPSKAAPSSSFSSASGTNNTGY 377
+ G G GGN GN + G GGNG G G G + ++ S S S SG N +G
Sbjct: 104 NGSDGSGSGGNGSGGNGSDGSGSGGNGSGGNGSDGNGSGGNGSSGSGSDGSGSGGNGSGG 163
Query: 378 DGAGLAEFYGNGAVYSDPTWRSSAPETEGPGSFSYGIGGGGVGPSSDVSARSSSPGYVGS 557
+G+ ++ G+G SD + GS S G G G G + S+ S G G+
Sbjct: 164 NGSSGSDGSGSGGNGSDGNGSGGNGSSGSDGSGSGGNGSDGNGSGGNGSSGSDGSGSGGN 223
Query: 558 YS 563
S
Sbjct: 224 SS 225
>gi|217957992|ref|YP_002336536.1| lpxtg-motif cell wall anchor domain protein
[Bacillus cereus AH187]
Length = 392
Score = 74 bits (179), Expect = 5e-011
Identities = 49/159 (30%), Positives = 68/159 (42%)
Frame = +3
Query: 87 NGGLNYNNNNGANSNSNTYMGGTASGNNALSGPFGNWGAAPGGGGGGNNGVGNENLKFGY 266
NGG ++ +G N + G SG N G + G G GGN GN + G
Sbjct: 57 NGGSQDDSGSGGNGSGGNGSDGNGSGGNGSGGNGSGGNGSDGSGSGGNGSGGNGSDGSGS 116
Query: 267 GGNGESGFGLGTRNIGPSKAAPSSSFSSASGTNNTGYDGAGLAEFYGNGAVYSDPTWRSS 446
GGNG G G G + ++ S S S SG N +G +G+ ++ G+G SD
Sbjct: 117 GGNGSGGNGSDGNGSGGNGSSGSGSDGSGSGGNGSGGNGSSGSDGSGSGGNGSDGNGSGG 176
Query: 447 APETEGPGSFSYGIGGGGVGPSSDVSARSSSPGYVGSYS 563
+ GS S G G G G + S+ S G G+ S
Sbjct: 177 NGSSGSDGSGSGGNGSDGNGSGGNGSSGSDGSGSGGNSS 215
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,267,505,509,631
Number of Sequences: 15229318
Number of Extensions: 2267505509631
Number of Successful Extensions: 573483098
Number of sequences better than 0.0: 0
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