BLASTX 7.6.2
Query= UN19360 /QuerySize=1154
(1153 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G04110.1 | Symbols: | DNA topoisomerase II fa... 270 1e-072
TAIR9_protein||AT4G11400.1 | Symbols: | ARID/BRIGHT DNA-binding... 123 2e-028
TAIR9_protein||AT1G26580.1 | Symbols: | FUNCTIONS IN: molecular... 93 3e-019
TAIR9_protein||AT2G03470.1 | Symbols: | myb family transcriptio... 81 1e-015
TAIR9_protein||AT2G03470.2 | Symbols: | myb family transcriptio... 81 1e-015
TAIR9_protein||AT1G13880.1 | Symbols: | ELM2 domain-containing ... 77 1e-014
>TAIR9_protein||AT5G04110.1 | Symbols: | DNA topoisomerase II family protein |
chr5:1110757-1114112 REVERSE
Length = 547
Score = 270 bits (690), Expect = 1e-072
Identities = 125/179 (69%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Frame = +1
Query: 313 NRKDVGVKIPGSNKTKPVIPVGPGFQAEIPVWIAPTKKGKFYGSPGDSDTLRWLGAGVWP 492
N+ V GSNKT+P IP+GP FQAEIPVWIAPTKKGKFYGSPGDS+TLRWLG GVWP
Sbjct: 343 NKTSKDVITHGSNKTRPAIPIGPRFQAEIPVWIAPTKKGKFYGSPGDSNTLRWLGTGVWP 402
Query: 493 TYSLKKKVYYKKIGEGRPDSCSCPTPGSTDCVKLHIKEARELLEKETGGAFYTWKFDEMG 672
TYSLKK V+ KK+GEGR DSCSC +P ST+C+K H KEA+ELLEKE AF TW+FD+MG
Sbjct: 403 TYSLKKTVHSKKVGEGRSDSCSCASPRSTNCIKRHKKEAQELLEKEINRAFSTWEFDQMG 462
Query: 673 -EVRSKSWTAKEEQKFRSLVRKNPLSNRDGFWKYASKAFPRRSEKDVISYYYNVFLNHR 846
E+ KSWTAKEE++F +LV+KNPLS+ DGFW++AS AFP++S+KD++SYYYNVFL R
Sbjct: 463 EEIVLKSWTAKEERRFEALVKKNPLSSSDGFWEFASNAFPQKSKKDLLSYYYNVFLIKR 521
>TAIR9_protein||AT4G11400.1 | Symbols: | ARID/BRIGHT DNA-binding
domain-containing protein / ELM2 domain-containing protein / Myb-like
DNA-binding domain-containing protein | chr4:6938717-6940539 FORWARD
Length = 574
Score = 123 bits (308), Expect = 2e-028
Identities = 73/211 (34%), Positives = 116/211 (54%), Gaps = 23/211 (10%)
Frame = +1
Query: 223 SFSGNELWNCKKGIKARHQTVAAAAASNRPNRKDVGVKIPGSNKTKPVIPVGPGFQAEIP 402
S S + C+K + A ++R RK +IP + I VG QA++
Sbjct: 332 SLSKSRSTKCRKLTIIASERAGLTAGTSRA-RKRNKAEIP-----RRCIKVGHQHQAQVD 385
Query: 403 VWIAPTKKGKFYGSPGDSDTLRWLGAGVWP---TYSLKKKVYYKKIGEGRPDSCSCPTPG 573
W T+ G DSD+ +WLG +WP + +L + + +G+GRPDSCSC G
Sbjct: 386 EW---TESGV------DSDS-KWLGTRIWPPENSEALDQTLGNDLVGKGRPDSCSCELSG 435
Query: 574 STDCVKLHIKEARELLEKETGGAFYTWKFDEMGEVRSKSWTAKEEQKFRSLVRKNPLSNR 753
+C +LHI E R L++E G F+ W+F++MGE WT +EE++F+ ++ +P S
Sbjct: 436 FVECTRLHIAEKRMELKRELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIADPQS-- 493
Query: 754 DGFWKYASKAFPRRSEKDVISYYYNVFLNHR 846
FW A+K FP++ ++++SYY+NVFL +R
Sbjct: 494 --FWTNAAKNFPKKKREELVSYYFNVFLINR 522
>TAIR9_protein||AT1G26580.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: myb family transcription factor / ELM2 domain-containing
protein (TAIR:AT2G03470.1); Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 78;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:9185620-9187213 FORWARD
Length = 494
Score = 93 bits (229), Expect = 3e-019
Identities = 61/175 (34%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Frame = +1
Query: 352 KTKPVIPVGPGFQAEIPVWIAPTKKGKFYGS--------PGDSDTLRWLGAGVWPTYSLK 507
+ K +P+GPG QAEIP W ++ G S G +D + G V P L
Sbjct: 130 RAKKQVPIGPGHQAEIPEW-EGSQTGNIETSGMSVQNHISGCADGEKLFGTSVIPMPGLT 188
Query: 508 KKVYYKKI-GEGRPDSCSCPTPGSTDCVKLHIKEARELLEKETGG-AFYTWKFDEMGEVR 681
+ I G+GR C C S CV HIKEARE L K G F EMGE
Sbjct: 189 TVAHIDDIVGKGR-KFCVCRDRDSVRCVCQHIKEAREELVKTFGNETFKELGLCEMGEKG 247
Query: 682 SKSWTAKEEQKFRSLVRKNPLSNRDGFWKYASKAFPRRSEKDVISYYYNVFLNHR 846
+ W+ ++ Q F +V NP++ FW++ AF R++K+++S+Y+NVF+ R
Sbjct: 248 ALKWSDEDAQLFHEVVYSNPVTLGQNFWRHLEAAFCSRTQKEIVSFYFNVFVLRR 302
>TAIR9_protein||AT2G03470.1 | Symbols: | myb family transcription factor / ELM2
domain-containing protein | chr2:1045694-1047130 REVERSE
Length = 451
Score = 81 bits (198), Expect = 1e-015
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = +1
Query: 532 GEGRPDSCSCPTPGSTDCVKLHIKEARELLEKETG-GAFYTWKFDEMGEVRSKSWTAKEE 708
G+GR + C C GS CV+ HI EARE L + G F EMGE + WT +EE
Sbjct: 174 GQGRKE-CLCLDKGSIRCVRRHIIEARESLVETIGYERFMELGLCEMGEEVASLWTEEEE 232
Query: 709 QKFRSLVRKNPLSNRDGFWKYASKAFPRRSEKDVISYYYNVFLNHR 846
F +V NP S FWK FP R+ K+++SYY+NVF+ R
Sbjct: 233 DLFHKVVYSNPFSAGRDFWKQLKGTFPSRTMKELVSYYFNVFILRR 278
>TAIR9_protein||AT2G03470.2 | Symbols: | myb family transcription factor / ELM2
domain-containing protein | chr2:1045694-1047130 REVERSE
Length = 450
Score = 81 bits (198), Expect = 1e-015
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = +1
Query: 532 GEGRPDSCSCPTPGSTDCVKLHIKEARELLEKETG-GAFYTWKFDEMGEVRSKSWTAKEE 708
G+GR + C C GS CV+ HI EARE L + G F EMGE + WT +EE
Sbjct: 173 GQGRKE-CLCLDKGSIRCVRRHIIEARESLVETIGYERFMELGLCEMGEEVASLWTEEEE 231
Query: 709 QKFRSLVRKNPLSNRDGFWKYASKAFPRRSEKDVISYYYNVFLNHR 846
F +V NP S FWK FP R+ K+++SYY+NVF+ R
Sbjct: 232 DLFHKVVYSNPFSAGRDFWKQLKGTFPSRTMKELVSYYFNVFILRR 277
>TAIR9_protein||AT1G13880.1 | Symbols: | ELM2 domain-containing protein |
chr1:4749603-4750967 FORWARD
Length = 425
Score = 77 bits (189), Expect = 1e-014
Identities = 47/111 (42%), Positives = 60/111 (54%), Gaps = 8/111 (7%)
Frame = +1
Query: 526 KIGEGRPDSCSCPTPGSTDCVKLHIKEARELLEKETGGAFYTWKFD----EMGEVRSKSW 693
KIG+GR + C C GS CV+ HI E RE L G Y D EMGE +
Sbjct: 178 KIGKGRKE-CICLDKGSIRCVQQHIMENREDLFATIG---YDRCLDIGLCEMGEEVAARL 233
Query: 694 TAKEEQKFRSLVRKNPLSNRDGFWKYASKAFPRRSEKDVISYYYNVFLNHR 846
T EE F +V NP+S FWK+ AFP R+ K+++SYY+NVF+ R
Sbjct: 234 TEDEEDLFHEIVYSNPVSMDRDFWKHLKSAFPSRTMKEIVSYYFNVFILRR 284
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,059,480,512
Number of Sequences: 33410
Number of Extensions: 10059480512
Number of Successful Extensions: 333405162
Number of sequences better than 0.0: 0
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