BLASTX 7.6.2
Query= UN19443 /QuerySize=1446
(1445 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15237716|ref|NP_196063.1| binding to TOMV RNA 1L (long form) ... 430 3e-118
gi|296085941|emb|CBI31382.3| unnamed protein product [Vitis vini... 339 7e-091
gi|255583738|ref|XP_002532622.1| Far upstream element-binding pr... 330 3e-088
gi|118486946|gb|ABK95306.1| unknown [Populus trichocarpa] 314 3e-083
gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) ... 247 6e-063
gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT... 246 8e-063
gi|222424254|dbj|BAH20084.1| AT5G04430 [Arabidopsis thaliana] 196 1e-047
gi|146336943|gb|ABQ23585.1| putative KH-domain containing protei... 191 4e-046
gi|224113143|ref|XP_002316405.1| predicted protein [Populus tric... 188 3e-045
gi|225448894|ref|XP_002264331.1| PREDICTED: hypothetical protein... 188 3e-045
gi|226504964|ref|NP_001141009.1| hypothetical protein LOC1002730... 169 1e-039
gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT... 169 2e-039
gi|223949173|gb|ACN28670.1| unknown [Zea mays] 168 2e-039
gi|194701786|gb|ACF84977.1| unknown [Zea mays] 168 4e-039
gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays] 166 8e-039
gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare ... 166 1e-038
gi|223973385|gb|ACN30880.1| unknown [Zea mays] 153 1e-034
>gi|15237716|ref|NP_196063.1| binding to TOMV RNA 1L (long form) protein
[Arabidopsis thaliana]
Length = 313
Score = 430 bits (1105), Expect = 3e-118
Identities = 219/238 (92%), Positives = 229/238 (96%), Gaps = 4/238 (1%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
T DRIIMISGSIKEVV+GLELILDKLHSELHAE+G++VEPRRR+RLVVPNSSCGGIIGKG
Sbjct: 80 TTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKG 139
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
GATIKSFIEESKAGIKISPLDNT+YGLSDRLVTLSGT EEQMRAIDLILAKLTEDDHYSQ
Sbjct: 140 GATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQ 199
Query: 743 NVHSPYSYAAGYNAVNYAPNYAPNGSGGRYQNHKEEASTTVTIGVADEHIGLVLGRGGRN 564
NVHSPYSYAAGYN+V NYAPNGSGG+YQNHKEEASTTVTIGVADEHIGLVLGRGGRN
Sbjct: 200 NVHSPYSYAAGYNSV----NYAPNGSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRN 255
Query: 563 IMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQAETMIKQKVDSASERANE 390
IMEITQMTGARIKISDRGDFMSGTTDRKVSITG QRAIQQAETMIKQKVDSA+ER +
Sbjct: 256 IMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATERTTD 313
>gi|296085941|emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 339 bits (869), Expect = 7e-091
Identities = 167/235 (71%), Positives = 206/235 (87%), Gaps = 4/235 (1%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
T+DRIIMISG+ E++ +ELIL KL SE+H E+G + +PR ++RL+VPNSSCGGIIGKG
Sbjct: 127 TSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKG 186
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
G+TIKSFIE+S+A IKISP DN Y GL+DRLVTL G++EEQMRAIDLIL+KLTED HY+Q
Sbjct: 187 GSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQ 246
Query: 743 NVHSPYSYAAGYNAVNYAPNYAPNGSGGRYQNHKEEASTTVTIGVADEHIGLVLGRGGRN 564
+++P+SYAA YN++ NY PNG+GG++QN+KE+ S +VTIGVADEHIGLV+GRGGRN
Sbjct: 247 FMNAPFSYAAAYNSM----NYGPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGRN 302
Query: 563 IMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQAETMIKQKVDSASER 399
IM+I+Q +GARIKISDRGDFMSGTTDRKV+ITGSQRAI+ AE+MI QKV SASER
Sbjct: 303 IMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 357
>gi|255583738|ref|XP_002532622.1| Far upstream element-binding protein, putative
[Ricinus communis]
Length = 314
Score = 330 bits (846), Expect = 3e-088
Identities = 163/238 (68%), Positives = 203/238 (85%), Gaps = 4/238 (1%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
T+DRII+ISG + +V+ G+EL+L KL SELH E+G DV+PR ++RLVVPNSSCG IIGKG
Sbjct: 81 TSDRIILISGILDDVLKGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKG 140
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
G+ IKSFIEES+AGIKISP DN +YGL+DRLVT++GT+EEQMRAIDLIL+KL +D HY Q
Sbjct: 141 GSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEEQMRAIDLILSKLYDDPHYVQ 200
Query: 743 NVHSPYSYAAGYNAVNYAPNYAPNGSGGRYQNHKEEASTTVTIGVADEHIGLVLGRGGRN 564
+H+P+SYA YN++ NY NG+GG++QN+KE+ + +VTIGVAD HIGLV+GRGGRN
Sbjct: 201 TMHAPFSYAVAYNSM----NYGANGAGGKFQNNKEDRTNSVTIGVADAHIGLVVGRGGRN 256
Query: 563 IMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQAETMIKQKVDSASERANE 390
IMEI+Q++GARIKISDRGDFMSGT DRK+ ITGSQRAI+ AE MI QKV ASER ++
Sbjct: 257 IMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAIRTAEGMIMQKVAYASERGSD 314
>gi|118486946|gb|ABK95306.1| unknown [Populus trichocarpa]
Length = 313
Score = 314 bits (803), Expect = 3e-083
Identities = 158/238 (66%), Positives = 194/238 (81%), Gaps = 4/238 (1%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
T+DRII+ISG I + + LELI+ KL SE+ E+G D EPR R+RLVVPN++CG IIGKG
Sbjct: 80 TSDRIILISGGIDDALKALELIIAKLLSEIPTEDGDDAEPRMRVRLVVPNNACGSIIGKG 139
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
G+ IKSFIEES AGIKISPLD + GL+DRLV ++GT+EEQM AIDLIL+KLT+D HY Q
Sbjct: 140 GSIIKSFIEESHAGIKISPLDTDFLGLTDRLVAITGTLEEQMHAIDLILSKLTDDTHYLQ 199
Query: 743 NVHSPYSYAAGYNAVNYAPNYAPNGSGGRYQNHKEEASTTVTIGVADEHIGLVLGRGGRN 564
N+H+P SYAA YN+ N+ NG+G ++Q++KE+ + +VTIGVADEHIGLV+GRGGRN
Sbjct: 200 NMHAPLSYAAAYNST----NHGLNGAGVKFQHNKEDRTNSVTIGVADEHIGLVVGRGGRN 255
Query: 563 IMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQAETMIKQKVDSASERANE 390
IMEI+Q +GARIKISDRGDFMSGT DRK++ITGSQRAI AE MI QKV ASER +
Sbjct: 256 IMEISQNSGARIKISDRGDFMSGTNDRKITITGSQRAIHAAEDMIMQKVSYASERETD 313
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein
[Arabidopsis thaliana]
Length = 334
Score = 247 bits (628), Expect = 6e-063
Identities = 124/142 (87%), Positives = 133/142 (93%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
T DRIIMISGSIKEVV+GLELILDKLHSELHAE+G++VEPRRR+RLVVPNSSCGGIIGKG
Sbjct: 80 TTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKG 139
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
GATIKSFIEESKAGIKISPLDNT+YGLSDRLVTLSGT EEQMRAIDLILAKLTEDDHYSQ
Sbjct: 140 GATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQ 199
Query: 743 NVHSPYSYAAGYNAVNYAPNYA 678
NVHSPYSYA + + + P YA
Sbjct: 200 NVHSPYSYAGLFYSGFHGPPYA 221
Score = 196 bits (496), Expect = 1e-047
Identities = 102/120 (85%), Positives = 107/120 (89%), Gaps = 10/120 (8%)
Frame = -1
Query: 731 PYSYA------AGYNAVNYAPNYAPNGSGGRYQNHKEEASTTVTIGVADEHIGLVLGRGG 570
PY+YA AGYN+V NYAPNGSGG+YQNHKEEASTTVTIGVADEHIGLVLGRGG
Sbjct: 219 PYAYALPSVATAGYNSV----NYAPNGSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGG 274
Query: 569 RNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQAETMIKQKVDSASERANE 390
RNIMEITQMTGARIKISDRGDFMSGTTDRKVSITG QRAIQQAETMIKQKVDSA+ER +
Sbjct: 275 RNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATERTTD 334
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225
[Arabidopsis lyrata subsp. lyrata]
Length = 334
Score = 246 bits (627), Expect = 8e-063
Identities = 123/142 (86%), Positives = 133/142 (93%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
T DRIIMISGSIKEV++GLELILDKLHSELHAE+G++VEPRRR+RLVVPNSSCGGIIGKG
Sbjct: 80 TTDRIIMISGSIKEVINGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKG 139
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
GATIKSFIEESKAGIKISPLDNT+YGLSDRLVTLSGT EEQMRAIDLILAKLTEDDHYSQ
Sbjct: 140 GATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQ 199
Query: 743 NVHSPYSYAAGYNAVNYAPNYA 678
NVHSPYSYA + + + P YA
Sbjct: 200 NVHSPYSYAGLFYSGFHGPPYA 221
Score = 195 bits (493), Expect = 3e-047
Identities = 101/120 (84%), Positives = 108/120 (90%), Gaps = 10/120 (8%)
Frame = -1
Query: 731 PYSYA------AGYNAVNYAPNYAPNGSGGRYQNHKEEASTTVTIGVADEHIGLVLGRGG 570
PY+YA AGYN+V NYAPNGSGG+YQNHK+EASTTVTIGVADEHIGLVLGRGG
Sbjct: 219 PYAYALPSVATAGYNSV----NYAPNGSGGKYQNHKDEASTTVTIGVADEHIGLVLGRGG 274
Query: 569 RNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQAETMIKQKVDSASERANE 390
RNIMEITQ+TGARIKISDRGDFMSGTTDRKVSITG QRAIQQAETMIKQKVDSA+ERA +
Sbjct: 275 RNIMEITQITGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATERATD 334
>gi|222424254|dbj|BAH20084.1| AT5G04430 [Arabidopsis thaliana]
Length = 151
Score = 196 bits (496), Expect = 1e-047
Identities = 102/120 (85%), Positives = 107/120 (89%), Gaps = 10/120 (8%)
Frame = -1
Query: 731 PYSYA------AGYNAVNYAPNYAPNGSGGRYQNHKEEASTTVTIGVADEHIGLVLGRGG 570
PY+YA AGYN+V NYAPNGSGG+YQNHKEEASTTVTIGVADEHIGLVLGRGG
Sbjct: 36 PYAYALPSVATAGYNSV----NYAPNGSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGG 91
Query: 569 RNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQAETMIKQKVDSASERANE 390
RNIMEITQMTGARIKISDRGDFMSGTTDRKVSITG QRAIQQAETMIKQKVDSA+ER +
Sbjct: 92 RNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATERTTD 151
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago
truncatula]
Length = 334
Score = 191 bits (483), Expect = 4e-046
Identities = 94/155 (60%), Positives = 123/155 (79%), Gaps = 7/155 (4%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
T DRIIM+SG+I EV+ +ELIL KL SELH+E+ +DVEP+ ++RL+VPN SCGGIIGKG
Sbjct: 81 TTDRIIMVSGAINEVLRAVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKG 140
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
GATI+SFIEES+AGIKISP DN+YYG +DR+VT++GT++EQMR IDLI++KL ED HYS
Sbjct: 141 GATIRSFIEESQAGIKISPQDNSYYGQNDRIVTVTGTLDEQMRGIDLIVSKLAEDPHYSH 200
Query: 743 NVHSPYSYA----AGYNAVNYA---PNYAPNGSGG 660
++ SP++Y+ +GY V Y P+ AP G
Sbjct: 201 SMSSPFTYSGAYVSGYQGVPYTYVLPSVAPPAYNG 235
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 188 bits (476), Expect = 3e-045
Identities = 91/142 (64%), Positives = 118/142 (83%), Gaps = 4/142 (2%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
T+DRIIM+SG I +V+ +ELI+ KL SE+ AE+G + EPR R+RLVVPNS+CG IIGKG
Sbjct: 80 TSDRIIMVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIGKG 139
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
G+ IKSFIEES AGIKISPLD ++GL+DRLVT++GT+EEQM AIDLIL+KLT+D HYSQ
Sbjct: 140 GSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHYSQ 199
Query: 743 NVHSPYSYA----AGYNAVNYA 690
+H+P+SYA +G++ + YA
Sbjct: 200 TMHAPFSYAGVFFSGFDGIQYA 221
>gi|225448894|ref|XP_002264331.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 330
Score = 188 bits (475), Expect = 3e-045
Identities = 90/141 (63%), Positives = 118/141 (83%), Gaps = 4/141 (2%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
T+DRIIMISG+ E++ +ELIL KL SE+H E+G + +PR ++RL+VPNSSCGGIIGKG
Sbjct: 79 TSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKG 138
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
G+TIKSFIE+S+A IKISP DN Y GL+DRLVTL G++EEQMRAIDLIL+KLTED HY+Q
Sbjct: 139 GSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQ 198
Query: 743 NVHSPYSYA----AGYNAVNY 693
+++P+SYA +G++ + Y
Sbjct: 199 FMNAPFSYAGVFFSGFHGIPY 219
Score = 160 bits (403), Expect = 8e-037
Identities = 82/117 (70%), Positives = 98/117 (83%), Gaps = 10/117 (8%)
Frame = -1
Query: 731 PYSY------AAGYNAVNYAPNYAPNGSGGRYQNHKEEASTTVTIGVADEHIGLVLGRGG 570
PY+Y A YN++ NY PNG+GG++QN+KE+ S +VTIGVADEHIGLV+GRGG
Sbjct: 218 PYTYVLPSVPTAAYNSM----NYGPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGG 273
Query: 569 RNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQAETMIKQKVDSASER 399
RNIM+I+Q +GARIKISDRGDFMSGTTDRKV+ITGSQRAI+ AE+MI QKV SASER
Sbjct: 274 RNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 330
>gi|226504964|ref|NP_001141009.1| hypothetical protein LOC100273088 [Zea mays]
Length = 221
Score = 169 bits (427), Expect = 1e-039
Identities = 88/131 (67%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSEL--HAEEGSDVEPRRRLRLVVPNSSCGGIIG 930
TNDRIIM+SG EV+ +ELIL+KL +EL EE ++ E R ++RLVVPNSSCGGIIG
Sbjct: 85 TNDRIIMVSGLFGEVMKAMELILEKLLAELLYQGEEFNEAEARPKVRLVVPNSSCGGIIG 144
Query: 929 KGGATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHY 750
KGGATIKSFIEES AGIKISP DN Y GL DRLVT++GT + QM AIDLIL KL+ED HY
Sbjct: 145 KGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHY 204
Query: 749 SQNVHSPYSYA 717
N+ SP+ YA
Sbjct: 205 PANLSSPFPYA 215
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690
[Sorghum bicolor]
Length = 343
Score = 169 bits (426), Expect = 2e-039
Identities = 90/137 (65%), Positives = 105/137 (76%), Gaps = 3/137 (2%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
TNDRIIM+SG EV+ +ELIL+KL +E EE ++ E R ++RLVVPNSSCGGIIGKG
Sbjct: 85 TNDRIIMVSGLFDEVMKAMELILEKLLAE--GEEFNEAEARPKVRLVVPNSSCGGIIGKG 142
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
GATIKSFIEES AGIKISP DN Y GL DRLVT++GT + QM AIDLIL KL+ED HY
Sbjct: 143 GATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPP 202
Query: 743 NVHSPYSYAAGYNAVNY 693
N+ SP+ Y AG NY
Sbjct: 203 NLSSPFPY-AGLTFPNY 218
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
Length = 344
Score = 168 bits (425), Expect = 2e-039
Identities = 87/129 (67%), Positives = 102/129 (79%), Gaps = 2/129 (1%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
TNDRIIM+SG EV+ +ELIL+KL +E EE ++ E R ++RLVVPNSSCGGIIGKG
Sbjct: 86 TNDRIIMVSGLFDEVMKAMELILEKLLAE--GEEFNEAEARPKVRLVVPNSSCGGIIGKG 143
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
GATIKSFIEES AGIKISP DN Y GL DRLVT++GT + QM AIDLIL KL+ED HY
Sbjct: 144 GATIKSFIEESHAGIKISPQDNNYVGLHDRLVTITGTFDNQMNAIDLILKKLSEDVHYPP 203
Query: 743 NVHSPYSYA 717
N+ SP+ YA
Sbjct: 204 NLSSPFPYA 212
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 168 bits (423), Expect = 4e-039
Identities = 87/129 (67%), Positives = 102/129 (79%), Gaps = 2/129 (1%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
TNDRIIM+SG EV+ +ELIL+KL +E EE ++ E R ++RLVVPNSSCGGIIGKG
Sbjct: 85 TNDRIIMVSGLFGEVMKAMELILEKLLAE--GEEFNEAEARPKVRLVVPNSSCGGIIGKG 142
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
GATIKSFIEES AGIKISP DN Y GL DRLVT++GT + QM AIDLIL KL+ED HY
Sbjct: 143 GATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPA 202
Query: 743 NVHSPYSYA 717
N+ SP+ YA
Sbjct: 203 NLSSPFPYA 211
>gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 166 bits (420), Expect = 8e-039
Identities = 86/129 (66%), Positives = 102/129 (79%), Gaps = 2/129 (1%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
TNDRIIM+SG EV+ +ELIL+KL +E EE ++ E R ++RLVVPN+SCGGIIGKG
Sbjct: 85 TNDRIIMVSGLFGEVMKAMELILEKLLAE--GEEFNEAEARPKVRLVVPNNSCGGIIGKG 142
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
GATIKSFIEES AGIKISP DN Y GL DRLVT++GT + QM AIDLIL KL+ED HY
Sbjct: 143 GATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPA 202
Query: 743 NVHSPYSYA 717
N+ SP+ YA
Sbjct: 203 NLSSPFPYA 211
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 360
Score = 166 bits (419), Expect = 1e-038
Identities = 85/129 (65%), Positives = 101/129 (78%), Gaps = 2/129 (1%)
Frame = -1
Query: 1103 TNDRIIMISGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKG 924
TNDRIIM+SG EVV +EL+L+KL SE EE ++ E R + RLVVPNSSCGGIIGKG
Sbjct: 94 TNDRIIMVSGLFDEVVKAMELVLEKLLSE--GEESNEAEARPKFRLVVPNSSCGGIIGKG 151
Query: 923 GATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQ 744
GATIKSFIE+S AGIKISP DN + GL DRLVT++G + QMRAI LIL+KL+ED HY
Sbjct: 152 GATIKSFIEDSHAGIKISPQDNNFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYPP 211
Query: 743 NVHSPYSYA 717
N+ SP+ YA
Sbjct: 212 NLSSPFPYA 220
>gi|223973385|gb|ACN30880.1| unknown [Zea mays]
Length = 254
Score = 153 bits (385), Expect = 1e-034
Identities = 80/121 (66%), Positives = 94/121 (77%), Gaps = 2/121 (1%)
Frame = -1
Query: 1079 SGSIKEVVSGLELILDKLHSELHAEEGSDVEPRRRLRLVVPNSSCGGIIGKGGATIKSFI 900
SG EV+ +ELIL+KL +E EE ++ E R ++RLVVPNSSCGGIIGKGGATIKSFI
Sbjct: 3 SGLFGEVMKAMELILEKLLAE--GEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFI 60
Query: 899 EESKAGIKISPLDNTYYGLSDRLVTLSGTIEEQMRAIDLILAKLTEDDHYSQNVHSPYSY 720
EES AGIKISP DN Y GL DRLVT++GT + QM AIDLIL KL+ED HY N+ SP+ Y
Sbjct: 61 EESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSPFPY 120
Query: 719 A 717
A
Sbjct: 121 A 121
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,354,205,064,082
Number of Sequences: 15229318
Number of Extensions: 2354205064082
Number of Successful Extensions: 584002404
Number of sequences better than 0.0: 0
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