BLASTX 7.6.2
Query= UN19488 /QuerySize=1645
(1644 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G61150.2 | Symbols: VIP4 | VIP4 (VERNALIZATION... 752 3e-217
TAIR9_protein||AT5G61150.1 | Symbols: VIP4 | VIP4 (VERNALIZATION... 747 8e-216
TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:... 68 1e-011
>TAIR9_protein||AT5G61150.2 | Symbols: VIP4 | VIP4 (VERNALIZATION INDEPENDENCE
4); protein binding | chr5:24603846-24607528 REVERSE
Length = 624
Score = 752 bits (1939), Expect = 3e-217
Identities = 390/474 (82%), Positives = 423/474 (89%), Gaps = 15/474 (3%)
Frame = +2
Query: 2 VAQSDVNIRNVFGSSDDEDAKEYVRNDIEADEPRSPMEDEEGSEKDQRPDDTMLDDDMVP 181
VAQSDVNIRNVFGSSDDEDA+EYVRND+E DE RSP+EDEEGSEKD RPDD +L DD++P
Sbjct: 161 VAQSDVNIRNVFGSSDDEDAEEYVRNDVEQDEHRSPIEDEEGSEKDLRPDDMVL-DDIIP 219
Query: 182 EEDPRYESEDERVEVRHRERPVGPPLEVEVPFRLPPGDPEKMNMIKVSSIMGIDPKPFDA 361
EEDP+YESE E VE R+RERPVGPPLEVEVPFR PPGDP KMNMIKVS+IMGIDPKPFDA
Sbjct: 220 EEDPQYESEAEHVEARYRERPVGPPLEVEVPFRPPPGDPVKMNMIKVSNIMGIDPKPFDA 279
Query: 362 KTFVEEDTFERD--GTKTRIRLVNNIVRHRFVKGRDGKTYSESNARFVRWSDGSLQLLIG 535
KTFVEEDTF D G K RIRL NNIVRHRFVK RDGKTYSESNARFVRWSDGSLQLLIG
Sbjct: 280 KTFVEEDTFMTDEPGAKNRIRLDNNIVRHRFVKSRDGKTYSESNARFVRWSDGSLQLLIG 339
Query: 536 NEVLDITEQDARQDQNHLLLKHEKGILQSQGRILKKMRFIPSSLTSNSHRLLTALVDSRE 715
NEVL+ITEQDA++DQNHL +KHEKGILQSQGRILKKMRF PSSLTSNSHRLLTA+V+SR+
Sbjct: 340 NEVLNITEQDAKEDQNHLFIKHEKGILQSQGRILKKMRFTPSSLTSNSHRLLTAIVESRQ 399
Query: 716 KKEFKVKNCVTDIDPEREKEKRERMESQNLKASTKLSQAREKIKRKYPLPVARRQLSTGY 895
KK FKVKNCVTDIDPEREKEKRE+ ESQNLKASTKLSQAREKIKRKYPLPV RRQLSTGY
Sbjct: 400 KKAFKVKNCVTDIDPEREKEKREKAESQNLKASTKLSQAREKIKRKYPLPVERRQLSTGY 459
Query: 896 LEDALEEDEETDHYGSHRSNRGYEEDLEAEAQRERRIMNAKKSQKGFPGRSSMSSARPTR 1075
LEDAL+ED+E +RSNRGYEEDLEAEAQRERRI+NAKKS KG PGRSSM+SARP+R
Sbjct: 460 LEDALDEDDE-----DYRSNRGYEEDLEAEAQRERRILNAKKSHKGIPGRSSMTSARPSR 514
Query: 1076 RQAEYSESEREESEYETEEEEEEEEERPRSRKRVKEPEDEYEED--EEEEEEGKTNRYSE 1249
RQ EYSESEREESEYETEEEEEE+ +R R K+ EDEYEED E+EEE GK+NRYS+
Sbjct: 515 RQMEYSESEREESEYETEEEEEEKSP---ARGRGKDSEDEYEEDAEEDEEERGKSNRYSD 571
Query: 1250 EDEEEEEGVKAGKE-RGSSRKRKGIESDEEEESPPRKAPTHRRMAMVYDSDED* 1408
EDEEEEEG +A K+ RGS RKRKGIESD EEESPPRKAPTHRR A++ DSDED*
Sbjct: 572 EDEEEEEGGRAEKDHRGSGRKRKGIESD-EEESPPRKAPTHRRKAVIDDSDED* 624
>TAIR9_protein||AT5G61150.1 | Symbols: VIP4 | VIP4 (VERNALIZATION INDEPENDENCE
4); protein binding | chr5:24603846-24607528 REVERSE
Length = 626
Score = 747 bits (1926), Expect = 8e-216
Identities = 390/476 (81%), Positives = 423/476 (88%), Gaps = 17/476 (3%)
Frame = +2
Query: 2 VAQSDVNIRNVFGSSDDEDAKEYVRNDIEADEPRSPMEDEEGSEKDQRPDDTMLDDDMVP 181
VAQSDVNIRNVFGSSDDEDA+EYVRND+E DE RSP+EDEEGSEKD RPDD +L DD++P
Sbjct: 161 VAQSDVNIRNVFGSSDDEDAEEYVRNDVEQDEHRSPIEDEEGSEKDLRPDDMVL-DDIIP 219
Query: 182 EEDPRYESEDERVEVRHRERPVGPPLEVEVPFRLPPGDPEKMNMIKVSSIMGIDPKPFDA 361
EEDP+YESE E VE R+RERPVGPPLEVEVPFR PPGDP KMNMIKVS+IMGIDPKPFDA
Sbjct: 220 EEDPQYESEAEHVEARYRERPVGPPLEVEVPFRPPPGDPVKMNMIKVSNIMGIDPKPFDA 279
Query: 362 KTFVEEDTFERD--GTKTRIRLVNNIVRHRFVKGRDGKTYSESNARFVRWSDGSLQLLIG 535
KTFVEEDTF D G K RIRL NNIVRHRFVK RDGKTYSESNARFVRWSDGSLQLLIG
Sbjct: 280 KTFVEEDTFMTDEPGAKNRIRLDNNIVRHRFVKSRDGKTYSESNARFVRWSDGSLQLLIG 339
Query: 536 NEVLDITEQDARQDQNHLLLKHEKGILQSQGRILKKMRFIPSSLTSNSHRLLTALVDSRE 715
NEVL+ITEQDA++DQNHL +KHEKGILQSQGRILKKMRF PSSLTSNSHRLLTA+V+SR+
Sbjct: 340 NEVLNITEQDAKEDQNHLFIKHEKGILQSQGRILKKMRFTPSSLTSNSHRLLTAIVESRQ 399
Query: 716 KKEFKVKNCVTDIDPEREKEKRERMESQNLKASTKLSQAREKIKRKYPLPVARRQLSTGY 895
KK FKVKNCVTDIDPEREKEKRE+ ESQNLKASTKLSQAREKIKRKYPLPV RRQLSTGY
Sbjct: 400 KKAFKVKNCVTDIDPEREKEKREKAESQNLKASTKLSQAREKIKRKYPLPVERRQLSTGY 459
Query: 896 LEDALEEDEETDHYGSHRSNRGYEEDLEAEAQRERRIMNAKKSQKGFPGRSSMSSARPTR 1075
LEDAL+ED+E +RSNRGYEEDLEAEAQRERRI+NAKKS KG PGRSSM+SARP+R
Sbjct: 460 LEDALDEDDE-----DYRSNRGYEEDLEAEAQRERRILNAKKSHKGIPGRSSMTSARPSR 514
Query: 1076 RQAEYSESEREESEYETEEEEEEEEERPRSRKRVKEPEDEYEED--EEEEEEGKTNRYSE 1249
RQ EYSESEREESEYETEEEEEE+ +R R K+ EDEYEED E+EEE GK+NRYS+
Sbjct: 515 RQMEYSESEREESEYETEEEEEEKSP---ARGRGKDSEDEYEEDAEEDEEERGKSNRYSD 571
Query: 1250 EDEEEEE--GVKAGKE-RGSSRKRKGIESDEEEESPPRKAPTHRRMAMVYDSDED* 1408
EDEEEEE G +A K+ RGS RKRKGIESD EEESPPRKAPTHRR A++ DSDED*
Sbjct: 572 EDEEEEEVAGGRAEKDHRGSGRKRKGIESD-EEESPPRKAPTHRRKAVIDDSDED* 626
>TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:971107-971627
FORWARD
Length = 82
Score = 68 bits (165), Expect = 1e-011
Identities = 35/67 (52%), Positives = 43/67 (64%)
Frame = +2
Query: 1094 ESEREESEYETEEEEEEEEERPRSRKRVKEPEDEYEEDEEEEEEGKTNRYSEEDEEEEEG 1273
E E EE E E EEEEEEEEE + +E E+E EE+EEEEEE + EE+EEEEE
Sbjct: 7 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 66
Query: 1274 VKAGKER 1294
+ +ER
Sbjct: 67 DREREER 73
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,102,396,634
Number of Sequences: 33410
Number of Extensions: 10102396634
Number of Successful Extensions: 333418700
Number of sequences better than 0.0: 0
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