BLASTX 7.6.2

Query= UN19491 /QuerySize=1015
        (1014 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|P47758|SRPRB_MOUSE Signal recognition particle receptor subun...    116   4e-025
sp|Q9Y5M8|SRPRB_HUMAN Signal recognition particle receptor subun...    114   1e-024
sp|Q4FZX7|SRPRB_RAT Signal recognition particle receptor subunit...    114   2e-024
sp|Q54XX1|SRPRB_DICDI Signal recognition particle receptor subun...    113   2e-024

>sp|P47758|SRPRB_MOUSE Signal recognition particle receptor subunit beta OS=Mus
        musculus GN=Srprb PE=1 SV=1

          Length = 269

 Score =  116 bits (288), Expect = 4e-025
 Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 8/237 (3%)
 Frame = +2

Query: 197 QDQLYAAVGVLLLTTIFLLFFFSIRLFRRTKANTVLLSGLSGSGKTVLFYQLRDGSSHQG 376
           +D    +V V LL  +  L F+     R++    VL  GL  SGKT+LF +L  G  ++ 
Sbjct:  31 RDPTLLSVAVALLAVLLTLVFWKFIWSRKSSQRAVLFVGLCDSGKTLLFVRLLTG-QYRD 89

Query: 377 SVTSMEPNEGTFVLHTENTNKTKPVHLVDVPGHSRLRSK-LEEYLPRAAAIVFVVDALEF 553
           + TS+  +     ++  N N+   + L+D+PGH  LR + L+ +   A A+VFVVD+  F
Sbjct:  90 TQTSITDSS---AIYKVNNNRGNSLTLIDLPGHESLRFQLLDRFKSSARAVVFVVDSAAF 146

Query: 554 LPNCRAASEYLYDILTNASVVKNKIPVLLCCNKTDKITAHTKEFIRKQMEKEIEKLRFSR 733
               +  +E+LY +L ++  +KN   +L+ CNK D   A + + I++Q+EKE+  LR +R
Sbjct: 147 QREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAKSAKLIQQQLEKELNTLRVTR 206

Query: 734 SAV-STADIAN--DFTLGIEGEVFSFSHCLNKVTVAEASGLTGETEQVQEFIREYVK 895
           SA  ST D ++     LG +G+ F FS    KV   E S   G  +     I++  K
Sbjct: 207 SAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGGRGDTGSADIQDLEK 263

>sp|Q9Y5M8|SRPRB_HUMAN Signal recognition particle receptor subunit beta OS=Homo
        sapiens GN=SRPRB PE=1 SV=3

          Length = 271

 Score =  114 bits (284), Expect = 1e-024
 Identities = 82/230 (35%), Positives = 122/230 (53%), Gaps = 13/230 (5%)
 Frame = +2

Query: 185 QQIPQ-DQLYAAVGVLLLTTIFLLFFFSIRLFRRTKANTVLLSGLSGSGKTVLFYQLRDG 361
           Q++ Q D    +V V +L  +  L F+ +   RR+    VLL GL  SGKT+LF +L  G
Sbjct:  28 QELQQTDPTLLSVVVAVLAVLLTLVFWKLIRSRRSSQRAVLLVGLCDSGKTLLFVRLLTG 87

Query: 362 --SSHQGSVTSMEPNEGTFVLHTENTNKTKPVHLVDVPGHSRLRSK-LEEYLPRAAAIVF 532
                Q S+T       +  ++  N N+   + L+D+PGH  LR + LE +   A AIVF
Sbjct:  88 LYRDTQTSITD------SCAVYRVNNNRGNSLTLIDLPGHESLRLQFLERFKSSARAIVF 141

Query: 533 VVDALEFLPNCRAASEYLYDILTNASVVKNKIPVLLCCNKTDKITAHTKEFIRKQMEKEI 712
           VVD+  F    +  +E+LY +L ++  +KN    L+ CNK D   A + + I++Q+EKE+
Sbjct: 142 VVDSAAFQREVKDVAEFLYQVLIDSMGLKNTPSFLIACNKQDIAMAKSAKLIQQQLEKEL 201

Query: 713 EKLRFSRSAV-STADIAN--DFTLGIEGEVFSFSHCLNKVTVAEASGLTG 853
             LR +RSA  ST D ++     LG +G+ F FS    KV   E S   G
Sbjct: 202 NTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 251

>sp|Q4FZX7|SRPRB_RAT Signal recognition particle receptor subunit beta OS=Rattus
        norvegicus GN=Srprb PE=2 SV=1

          Length = 269

 Score =  114 bits (283), Expect = 2e-024
 Identities = 83/240 (34%), Positives = 129/240 (53%), Gaps = 14/240 (5%)
 Frame = +2

Query: 152 EQWLNQGTEFVQQIPQDQLYAAVGVL--LLTTIFLLFFFSIRLFRRTKANTVLLSGLSGS 325
           + +L+   + +QQ     L  AV VL  LLT +F  F +S    R++    VL  GL  S
Sbjct:  18 QPYLDSLRQELQQRDPTLLSVAVAVLAVLLTLVFWKFIWS----RKSSQRAVLFVGLCDS 73

Query: 326 GKTVLFYQLRDGSSHQGSVTSMEPNEGTFVLHTENTNKTKPVHLVDVPGHSRLRSK-LEE 502
           GKT+LF +L  G  ++ + TS+  +     ++  N N+   + L+D+PGH  LR + L+ 
Sbjct:  74 GKTLLFVRLLTG-QYRDTQTSITDSS---AIYKVNNNRGNSLTLIDLPGHESLRLQFLDR 129

Query: 503 YLPRAAAIVFVVDALEFLPNCRAASEYLYDILTNASVVKNKIPVLLCCNKTDKITAHTKE 682
           +   A A+VFVVD+  F    +  +E+LY +L ++  +KN    L+ CNK D   A + +
Sbjct: 130 FKSSARAVVFVVDSATFQREVKDVAEFLYQVLIDSMALKNTPAFLVACNKQDIAMAKSAK 189

Query: 683 FIRKQMEKEIEKLRFSRSAV-STADIAN--DFTLGIEGEVFSFSHCLNKVTVAEASGLTG 853
            I++Q+EKE+  LR +RSA  ST D ++     LG +G+ F FS    KV   E S   G
Sbjct: 190 LIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 249

>sp|Q54XX1|SRPRB_DICDI Signal recognition particle receptor subunit beta
        OS=Dictyostelium discoideum GN=srprb PE=3 SV=1

          Length = 290

 Score =  113 bits (282), Expect = 2e-024
 Identities = 69/205 (33%), Positives = 113/205 (55%), Gaps = 12/205 (5%)
 Frame = +2

Query: 299 VLLSGLSGSGKTVLFYQLRDGSSHQGSVTSMEPNEGTFVLHTENTNKTKPVHLVDVPGHS 478
           + + GLS +GKT L   L +      + TS+  N G ++  TEN  K   + ++DVPG+ 
Sbjct:  88 IAILGLSNAGKTALLLNLTNVDKKISTHTSITTNNGVYI--TENKKK---LPIIDVPGNG 142

Query: 479 RLRSKLEEYLPRAAAIVFVVDALEFLPNCRAASEYLYDILTNASVVKNKIPVLLCCNKTD 658
           + ++ L + L  +A I++V+D   F+ N    ++YLYDILTN SV + KIPVL+  NK D
Sbjct: 143 KAKASLPKILSNSACIIYVIDGTTFIDNSTQEAQYLYDILTNESVYQKKIPVLVFNNKMD 202

Query: 659 KITAHTKEFIRKQMEKEIEKLRFSRSA----VSTADIANDFTLGIEGEVFSFSHCLNKVT 826
             +    E ++  +E+E++ LR +R A    +   +   D  LGIEG  F F H  N V 
Sbjct: 203 LDSTIDTEQVKNILERELDDLRRTRGATPIVLGQEEDKKDIYLGIEGTPFQFDHLPNDVQ 262

Query: 827 VA--EASGLTGETEQVQEFIREYVK 895
            +   AS   GE +++ + I+ +++
Sbjct: 263 FSNGSASPSNGELKEIDD-IKNFIQ 286

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,872,592,117
Number of Sequences: 518415
Number of Extensions: 81872592117
Number of Successful Extensions: 541474699
Number of sequences better than 0.0: 0