BLASTX 7.6.2
Query= UN19512 /QuerySize=1442
(1441 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G57790.1 | Symbols: | glycoside hydrolase fam... 827 5e-240
TAIR9_protein||AT4G23820.1 | Symbols: | glycoside hydrolase fam... 126 6e-029
TAIR9_protein||AT3G62110.1 | Symbols: | glycoside hydrolase fam... 92 7e-019
TAIR9_protein||AT5G41870.1 | Symbols: | glycoside hydrolase fam... 92 1e-018
TAIR9_protein||AT3G48950.1 | Symbols: | glycoside hydrolase fam... 85 1e-016
TAIR9_protein||AT4G33440.1 | Symbols: | glycoside hydrolase fam... 75 9e-014
TAIR9_protein||AT2G23900.1 | Symbols: | glycoside hydrolase fam... 72 6e-013
TAIR9_protein||AT1G23460.1 | Symbols: | polygalacturonase | chr... 63 5e-010
TAIR9_protein||AT4G32375.1 | Symbols: | glycoside hydrolase fam... 54 3e-007
TAIR9_protein||AT1G65570.1 | Symbols: | polygalacturonase, puta... 50 3e-006
TAIR9_protein||AT3G59850.1 | Symbols: | polygalacturonase, puta... 50 3e-006
TAIR9_protein||AT2G43860.1 | Symbols: | polygalacturonase, puta... 49 5e-006
TAIR9_protein||AT3G15720.1 | Symbols: | glycoside hydrolase fam... 49 7e-006
TAIR9_protein||AT4G35670.1 | Symbols: | glycoside hydrolase fam... 49 7e-006
>TAIR9_protein||AT3G57790.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:21405387-21407088
REVERSE
Length = 491
Score = 827 bits (2134), Expect = 5e-240
Identities = 404/474 (85%), Positives = 431/474 (90%), Gaps = 5/474 (1%)
Frame = -3
Query: 1415 SRLYTSSQKIQLPGDSLVLSVTDFGATGDGIHYDTSAIQSAINACNHQYISSSSICHVTF 1236
SR TS KIQLPGDSL LSVTDFGATGDGI+YDTSAIQS I+ACN Y S SSIC V F
Sbjct: 17 SRSDTSYSKIQLPGDSLTLSVTDFGATGDGINYDTSAIQSTIDACNRHYTSFSSICRVVF 76
Query: 1235 PPGTYLTAKLHLRSGVLLDVTENAVLLGGPRIED-YPGETSSEWYVVVANNATDVGITGG 1059
P G YLTAKLHLRSGV+LDVTENAVLLGGPRIED YP ETSS+WYVVVANNATDVGITGG
Sbjct: 77 PSGNYLTAKLHLRSGVILDVTENAVLLGGPRIEDYYPAETSSDWYVVVANNATDVGITGG 136
Query: 1058 GAIDGQGSKFVVRFDERKNVMVSWNQTGACLGDECRPRLVGFVDSTNVQIWNITLREPAY 879
GAIDGQGSKFVVRFDE+KNVMVSWNQTGACLGDECRPRLVGFVDS NV+IWNITLREPAY
Sbjct: 137 GAIDGQGSKFVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSINVEIWNITLREPAY 196
Query: 878 WCLHIVRCENTSIHDVSIFGDFNTPNNDGIDIEDSNNTFITRCHIDTGDDAICPKTYAAP 699
WCLHIVRCENTS+HDVSI GDFNTPNNDGIDIEDSNNT ITRCHIDTGDDAICPKTY P
Sbjct: 197 WCLHIVRCENTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYTGP 256
Query: 698 LYNLTVTDCWIRTKSSAIKLGSASWFEFKGLVFDNITIFESHRGLGMQIRDGGNVNGITF 519
LYNLT TDCWIRTKSSAIKLGSASWF+FKGLVFDNITIFESHRGLGMQIRDGGNV+ +TF
Sbjct: 257 LYNLTATDCWIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIRDGGNVSDVTF 316
Query: 518 SNMNISTRYYDPSWWGRAEPIYITTCPRNSSSTEGSISSLLFVNITIVSENGVFLSGSPN 339
SN+NISTRYYDPSWWGRAEPIYITTCPR+SS+ EGSIS+LLFVNITI SENGVFLSGSPN
Sbjct: 317 SNINISTRYYDPSWWGRAEPIYITTCPRDSSAKEGSISNLLFVNITIDSENGVFLSGSPN 376
Query: 338 GLLTDIKFKNMNITLRRWSNYTSGLVDYRPGCQGLMNHSATAGITMEHVNGFSVENVDLK 159
GLL+DIKFKNMN+T RRWSNY++GLVDYRPGCQGL+NH AT+GI MEHVNGF VENVDLK
Sbjct: 377 GLLSDIKFKNMNLTFRRWSNYSAGLVDYRPGCQGLVNHRATSGIIMEHVNGFRVENVDLK 436
Query: 158 WS-DDNLN-DWNVPLEFRPSTVNNVSFDGFSSGLLHEIV*V*VFFSFVGEHNIA 3
WS DD++N WNVPLEFRPSTVNNVSF GF+SGL ++ + VGE+NIA
Sbjct: 437 WSDDDDVNAAWNVPLEFRPSTVNNVSFVGFTSGLYTKL--FESDYVMVGENNIA 488
>TAIR9_protein||AT4G23820.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr4:12397217-12400050
REVERSE
Length = 445
Score = 126 bits (314), Expect = 6e-029
Identities = 95/317 (29%), Positives = 146/317 (46%), Gaps = 43/317 (13%)
Frame = -3
Query: 1361 LSVTDFGATGDGIHYDTSAIQSAINACNHQYISSSSICHVTFPPGTYLTAKLHLRSGVLL 1182
+S+TDFG GDG +T A ++AI H ++ ++ PPG YLT +L S + L
Sbjct: 41 ISITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYI--PPGVYLTESFNLTSHMTL 98
Query: 1181 DVTENAVL------LGGPRIEDYPG-----ETSSEWYV--VVANNATDVGITG-GGAIDG 1044
+ + AV+ P I+ P E Y+ + + DV ITG G IDG
Sbjct: 99 YLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDG 158
Query: 1043 QGSKFVVRFDERKNVMVSWNQTGACLGDECRPRLVGFVDSTNVQIWNITLREPAYWCLHI 864
QG V WN + RP L+ F DS + I N+ + +W +H
Sbjct: 159 QGE-------------VWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHP 205
Query: 863 VRCENTSIHDVSIFGDFNTPNNDGIDIEDSNNTFITRCHIDTGDDAICPKT--------Y 708
V C N IH V+I ++PN DGID + S N I +I TGDD + K+ Y
Sbjct: 206 VYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAY 265
Query: 707 AAPLYNLTVTDCWIRTKSSAIKLGSASWFEFKGLVFDNITIFESHRGLGMQIRD----GG 540
P N+T+ + + I +GS + K ++ ++IT+ S+ G+G+ I+ GG
Sbjct: 266 GRPSSNITIRRITGSSPFAGIAIGSETSGGIKNIIAEHITL--SNMGVGVNIKTNIGRGG 323
Query: 539 NVNGITFSNMNISTRYY 489
+ I S++ + T Y
Sbjct: 324 YIKNIKISDVYVDTAKY 340
>TAIR9_protein||AT3G62110.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:22997313-22999503
REVERSE
Length = 472
Score = 92 bits (227), Expect = 7e-019
Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 13/223 (5%)
Frame = -3
Query: 1361 LSVTDFGATGDGIHYDTSAIQSAINACNHQYISSSSICHVTFPPGTYLTAKLHLRSGVLL 1182
+S+T+FGA GDG+ +T A Q+A+ N S + P G +LT L S + L
Sbjct: 43 VSITEFGAVGDGVTLNTKAFQNALFYLNS--FSDKGGAKLFVPAGQWLTGSFDLISHLTL 100
Query: 1181 DVTENAVLLGGPRIEDYPGETSSEWYVVVANNATDVGITGGGAIDGQGSKFVV------R 1020
+ + A +LG E++P Y G I GQ VV
Sbjct: 101 WLDKGATILGSTSSENWPVVDPLPSY---GRGRELPGRRHRSLIYGQNLTDVVITGENGT 157
Query: 1019 FDERKNVMVSWNQTGACLGDECRPRLVGFVDSTNVQIWNITLREPAYWCLHIVRCENTSI 840
D + V W + G + RP LV ++ST + I N+T +W +H V C + +
Sbjct: 158 IDGQGTVWWDWFRNGEL--NYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVV 215
Query: 839 HDVSIFGDFNTPNNDGIDIEDSNNTFITRCHIDTGDDAICPKT 711
+++I +PN DG+D + S N I C+I TGDD + K+
Sbjct: 216 KNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKS 258
>TAIR9_protein||AT5G41870.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr5:16758817-16760490
REVERSE
Length = 450
Score = 92 bits (226), Expect = 1e-018
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 8/222 (3%)
Frame = -3
Query: 1364 VLSVTDFGATGDGIHYDTSAIQSAINACNHQYISSSSICHVTFPPGTYLTAKLHLRSGVL 1185
+LS++DFGA GDG +T A SAI+ + S+ + P G YLT +L S +
Sbjct: 44 MLSISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTL-LYVPRGVYLTQSFNLTSHMT 102
Query: 1184 LDVTENAVLLGGPRIEDYPGETSSEWYVVVANNATDVGITGGGAIDGQGSKFVVRFDERK 1005
L + + AV+ E +P Y G I G G VV
Sbjct: 103 LYLADGAVIKAVQDTEKWPLTDPLPSY---GRGREHPGRRYISFIHGDGLNDVVITGRNG 159
Query: 1004 NVMVS----WNQTGACLGDECRPRLVGFVDSTNVQIWNITLREPAYWCLHIVRCENTSIH 837
+ WN RP L+ F +STN+ + ++ L+ +W LH V C N +H
Sbjct: 160 TIDGQGEPWWNMWRHGTLKFTRPGLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVH 219
Query: 836 DVSIFGDFNTPNNDGIDIEDSNNTFITRCHIDTGDDAICPKT 711
V+I ++ N DGID + S+N I +I TGDD + K+
Sbjct: 220 HVTILAPTDSYNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 261
>TAIR9_protein||AT3G48950.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:18148017-18149987
FORWARD
Length = 470
Score = 85 bits (208), Expect = 1e-016
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 12/221 (5%)
Frame = -3
Query: 1355 VTDFGATGDGIHYDTSAIQSAINACNHQYISSSSICHVTFPPGTYLTAKLHLRSGVLLDV 1176
+TDFGA GDG +T A ++AI+ + +++ + PPG +LT +L S L +
Sbjct: 47 LTDFGAVGDGKTSNTKAFRNAISKLSQ--MATDGGAQLVVPPGKWLTGSFNLTSHFTLFI 104
Query: 1175 TENAVLLGGPRIEDYPGETSSEWYVVVANNATDVGITG--GGAIDGQGSKFVVRFDERKN 1002
A +L ++P Y D TG I G VV
Sbjct: 105 QRGATILASQDESEWPVIAPLPSY----GKGRDGTGTGRFNSLISGTNLTDVVITGNNGT 160
Query: 1001 V----MVSWNQTGACLGDECRPRLVGFVDSTNVQIWNITLREPAYWCLHIVRCENTSIHD 834
+ W++ RP L+ + S N+QI NITL + W +H V C + +
Sbjct: 161 INGQGQYWWDKFKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKS 220
Query: 833 VSIFGDFNTPNNDGIDIEDSNNTFITRCHIDTGDDAICPKT 711
V++ PN DGI+ + NT I C+I +GDD I K+
Sbjct: 221 VTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKS 261
>TAIR9_protein||AT4G33440.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr4:16092020-16094732
FORWARD
Length = 476
Score = 75 bits (183), Expect = 9e-014
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 15/183 (8%)
Frame = -3
Query: 1235 PPGTYLTAKLHLRSGVLLDVTENAVLLGGPRIEDYPGETSSEWYVVVANNATDVGITGGG 1056
P GT+L+ +L S L + A++LG ++++P Y G
Sbjct: 112 PEGTWLSGSFNLTSNFTLFLERGALILGSKDLDEWPIIEPLPSY---GRGRERPGGRHIS 168
Query: 1055 AIDGQGSKFVVRFDERKNV--------MVSWNQTGACLGDECRPRLVGFVDSTNVQIWNI 900
I G VV E + + WN+T R L+ +S N+ I N+
Sbjct: 169 LIHGDNLTNVVITGENGTIDGQGKMWWELWWNRTLV----HTRGHLIELKNSHNILISNL 224
Query: 899 TLREPAYWCLHIVRCENTSIHDVSIFGDFNTPNNDGIDIEDSNNTFITRCHIDTGDDAIC 720
TL +W +H V C N I +++I N PN DGID + S N I C+I++GDD +
Sbjct: 225 TLLNSPFWTIHPVYCSNVVIRNMTILAPMNAPNTDGIDPDSSTNVCIEDCYIESGDDLVA 284
Query: 719 PKT 711
K+
Sbjct: 285 VKS 287
>TAIR9_protein||AT2G23900.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr2:10174556-10176489
FORWARD
Length = 478
Score = 72 bits (176), Expect = 6e-013
Identities = 52/182 (28%), Positives = 75/182 (41%), Gaps = 12/182 (6%)
Frame = -3
Query: 1235 PPGTYLTAKLHLRSGVLLDVTENAVLLGGPRIEDYPGETSSEWYVVVANNATDVGITGGG 1056
PPG +LT +L S L + + A +L +YP Y G T
Sbjct: 96 PPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPVVAPLPSY---GQGRDAAGPTFAS 152
Query: 1055 AIDGQGSKFVVRFDERKNV-------MVSWNQTGACLGDECRPRLVGFVDSTNVQIWNIT 897
I G VV + V + G RP + + S NVQI NIT
Sbjct: 153 LISGTNLTDVVITGNNGTINGQGKYWWVKYRSGG--FKGITRPYTIEIIFSQNVQISNIT 210
Query: 896 LREPAYWCLHIVRCENTSIHDVSIFGDFNTPNNDGIDIEDSNNTFITRCHIDTGDDAICP 717
+ + W +H V C N + V+I ++PN DGI+ + NT I C++ +GDD I
Sbjct: 211 IIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAV 270
Query: 716 KT 711
K+
Sbjct: 271 KS 272
>TAIR9_protein||AT1G23460.1 | Symbols: | polygalacturonase |
chr1:8327382-8329622 FORWARD
Length = 461
Score = 63 bits (151), Expect = 5e-010
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 39/242 (16%)
Frame = -3
Query: 1064 GGGAIDGQGSKFVVRFDERKNVMVSWNQTGACLGDECRPRLVGFVDSTNVQIWNITLREP 885
G G IDG GSK+ ++ N++ C + P + S+ V++ +T++
Sbjct: 162 GKGVIDGSGSKWWAASCKK-------NKSNPC---KSAPTALTIESSSGVKVSGLTIQNS 211
Query: 884 AYWCLHIVRCENTSIHDVSIFGDFNTPNNDGIDIEDSNNTFITRCHIDTGDDAICPKTYA 705
I R ++ + V + ++PN DGI I S N + C I TGDD + +
Sbjct: 212 QQMNFIIARSDSVRVSKVMVSSPGDSPNTDGIHITGSTNVILQDCKIGTGDDCVSIVNAS 271
Query: 704 APLYNLTVTDCWIRTKSSAIKLGSASWFEFKGL----VFDNITIFESHRGLGMQIRDGGN 537
+ N+ + + + I +GS G+ V D + E+ GL ++ GG+
Sbjct: 272 S---NIKMKNIYC-GPGHGISIGSLGKDNTTGIVTQVVLDTALLRETTNGLRIKTYQGGS 327
Query: 536 --VNGITFSNMNISTRYYDPSWWGRAEPIYI--------TTCPRNSSSTEGSISSLLFVN 387
V GI F+N+ + A PI I TTC +S+ + IS +++ N
Sbjct: 328 GYVQGIRFTNVEMQ---------DVANPILIDQFYCDSPTTCQNQTSAVK--ISQIMYRN 376
Query: 386 IT 381
IT
Sbjct: 377 IT 378
>TAIR9_protein||AT4G32375.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr4:15628873-15631596
FORWARD
Length = 487
Score = 54 bits (127), Expect = 3e-007
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = -3
Query: 953 RPRLVGFVDSTNVQIWNITLREPAYWCLHIVRCENTSIHDVSIFGDFNTPNNDGIDIEDS 774
RPR +GF S+N+ +T + I+ C N ++ + + ++PN DGIDI S
Sbjct: 107 RPRTIGFSGSSNILYNGLTQMNSPKNHISILDCTNVTLSNFHLIAPKDSPNTDGIDIAHS 166
Query: 773 NNTFITRCHIDTGDDAI 723
NN I I TGDD I
Sbjct: 167 NNIRIFNSSIQTGDDCI 183
>TAIR9_protein||AT1G65570.1 | Symbols: | polygalacturonase, putative /
pectinase, putative | chr1:24374098-24375846 REVERSE
Length = 398
Score = 50 bits (118), Expect = 3e-006
Identities = 27/71 (38%), Positives = 36/71 (50%)
Frame = -3
Query: 935 FVDSTNVQIWNITLREPAYWCLHIVRCENTSIHDVSIFGDFNTPNNDGIDIEDSNNTFIT 756
F+DS NV+I + + + I RC N I DV I +PN DGI I+ S + +
Sbjct: 156 FMDSNNVKIKGVLSLNSQLFHIAINRCRNIKIEDVRIIAPDESPNTDGIHIQLSTDIEVR 215
Query: 755 RCHIDTGDDAI 723
I TGDD I
Sbjct: 216 NASIKTGDDCI 226
>TAIR9_protein||AT3G59850.1 | Symbols: | polygalacturonase, putative /
pectinase, putative | chr3:22109343-22111566 REVERSE
Length = 389
Score = 50 bits (118), Expect = 3e-006
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = -3
Query: 941 VGFVDSTNVQIWNITLREPAYWCLHIVRCENTSIHDVSIFGDFNTPNNDGIDIEDSNNTF 762
+GF S NV I +T + + I C N + V + D N+PN DGI ++ S+
Sbjct: 145 IGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHVQSSSTVS 204
Query: 761 ITRCHIDTGDDAI 723
I I TGDD +
Sbjct: 205 ILNSKISTGDDCV 217
>TAIR9_protein||AT2G43860.1 | Symbols: | polygalacturonase, putative /
pectinase, putative | chr2:18162945-18164428 REVERSE
Length = 406
Score = 49 bits (116), Expect = 5e-006
Identities = 26/71 (36%), Positives = 37/71 (52%)
Frame = -3
Query: 935 FVDSTNVQIWNITLREPAYWCLHIVRCENTSIHDVSIFGDFNTPNNDGIDIEDSNNTFIT 756
F S N++I +T + + I N +I V + D N+PN DGI +E S++ IT
Sbjct: 158 FSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHIT 217
Query: 755 RCHIDTGDDAI 723
I TGDD I
Sbjct: 218 NSRIGTGDDCI 228
>TAIR9_protein||AT3G15720.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:5325329-5327457
REVERSE
Length = 457
Score = 49 bits (115), Expect = 7e-006
Identities = 26/77 (33%), Positives = 39/77 (50%)
Frame = -3
Query: 953 RPRLVGFVDSTNVQIWNITLREPAYWCLHIVRCENTSIHDVSIFGDFNTPNNDGIDIEDS 774
RP + F N+++ +T + +HI C +I + I ++PN DGID+ S
Sbjct: 137 RPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGAS 196
Query: 773 NNTFITRCHIDTGDDAI 723
+N I C I TGDD I
Sbjct: 197 SNVVIQDCIIATGDDCI 213
>TAIR9_protein||AT4G35670.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr4:16914996-16917201
FORWARD
Length = 395
Score = 49 bits (115), Expect = 7e-006
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -3
Query: 953 RPRLVGFVDSTNVQIWNITLREPAYWCLHIVRCENTSIHDVSIFGDFNTPNNDGIDIEDS 774
RP + N++I IT + + I C +I ++++F +PN DGIDI DS
Sbjct: 143 RPTALHISKCDNLRINGITSIDSPKNHISIKTCNTVAISNINLFAPETSPNTDGIDISDS 202
Query: 773 NNTFITRCHIDTGDDAICPKTYAAPLYNLTVTDC 672
N I I TGDD I + ++ + N+T +C
Sbjct: 203 TNINIFDSTIQTGDDCIAINSGSSNI-NITGINC 235
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,102,396,634
Number of Sequences: 33410
Number of Extensions: 10102396634
Number of Successful Extensions: 333418700
Number of sequences better than 0.0: 0
|
