BLASTX 7.6.2
Query= UN19530 /QuerySize=685
(684 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G56710.1 | Symbols: | 60S ribosomal protein L... 235 3e-062
TAIR9_protein||AT4G26230.1 | Symbols: | 60S ribosomal protein L... 234 4e-062
TAIR9_protein||AT2G19740.1 | Symbols: | 60S ribosomal protein L... 224 4e-059
TAIR9_protein||AT5G56710.2 | Symbols: | 60S ribosomal protein L... 113 1e-025
>TAIR9_protein||AT5G56710.1 | Symbols: | 60S ribosomal protein L31 (RPL31C) |
chr5:22944003-22944767 REVERSE
Length = 120
Score = 235 bits (597), Expect = 3e-062
Identities = 116/120 (96%), Positives = 118/120 (98%)
Frame = +1
Query: 58 MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 237
MSEKKGRKEEV+TREYTINLHRRLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN
Sbjct: 1 MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60
Query: 238 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIDEED* 417
KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVI+EED*
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 120
>TAIR9_protein||AT4G26230.1 | Symbols: | 60S ribosomal protein L31 (RPL31B) |
chr4:13286026-13286553 FORWARD
Length = 120
Score = 234 bits (596), Expect = 4e-062
Identities = 116/120 (96%), Positives = 118/120 (98%)
Frame = +1
Query: 58 MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 237
MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLN
Sbjct: 1 MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60
Query: 238 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIDEED* 417
KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTK+I+EED*
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED* 120
>TAIR9_protein||AT2G19740.1 | Symbols: | 60S ribosomal protein L31 (RPL31A) |
chr2:8513577-8514346 FORWARD
Length = 120
Score = 224 bits (570), Expect = 4e-059
Identities = 112/120 (93%), Positives = 115/120 (95%)
Frame = +1
Query: 58 MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 237
M + KGRKEEVVTREYTINLHRRLHSCTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLN
Sbjct: 1 MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60
Query: 238 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIDEED* 417
KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVI+EE+*
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 120
>TAIR9_protein||AT5G56710.2 | Symbols: | 60S ribosomal protein L31 (RPL31C) |
chr5:22944003-22944767 REVERSE
Length = 86
Score = 113 bits (281), Expect = 1e-025
Identities = 54/56 (96%), Positives = 55/56 (98%)
Frame = +1
Query: 58 MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 225
MSEKKGRKEEV+TREYTINLHRRLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVD
Sbjct: 1 MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
Score = 59 bits (142), Expect = 2e-009
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = +1
Query: 229 KLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAK--EEFFSLVTVAEIPAEGLSGLGTKVI 402
+L+K + K + IR + A K +D + EEFFSLVTVAEIPAEGLSGLGTKVI
Sbjct: 23 RLHKCTFKKKAPKAIKEIR-KFAEKAMGTKDVRVDEEFFSLVTVAEIPAEGLSGLGTKVI 81
Query: 403 DEED* 417
+EED*
Sbjct: 82 EEED* 86
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,102,396,634
Number of Sequences: 33410
Number of Extensions: 10102396634
Number of Successful Extensions: 333418700
Number of sequences better than 0.0: 0
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