BLASTX 7.6.2
Query= UN19544 /QuerySize=1355
(1354 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297793491|ref|XP_002864630.1| hypothetical protein ARALYDRAFT... 164 3e-038
gi|15238389|ref|NP_200746.1| methyl-CPG-binding domain 6 protein... 164 4e-038
gi|297815816|ref|XP_002875791.1| hypothetical protein ARALYDRAFT... 137 5e-030
gi|15232591|ref|NP_190242.1| methyl-CPG-binding domain protein 5... 134 5e-029
gi|21554707|gb|AAM63666.1| unknown [Arabidopsis thaliana] 134 5e-029
gi|255584216|ref|XP_002532846.1| DNA binding protein, putative [... 98 3e-018
gi|224059490|ref|XP_002299872.1| methyl binding domain protein [... 92 2e-016
gi|224106479|ref|XP_002314180.1| methyl binding domain protein [... 89 2e-015
gi|297746071|emb|CBI16127.3| unnamed protein product [Vitis vini... 85 2e-014
gi|297459231|ref|XP_001788037.2| PREDICTED: methyl-CpG binding d... 58 3e-006
>gi|297793491|ref|XP_002864630.1| hypothetical protein ARALYDRAFT_919168
[Arabidopsis lyrata subsp. lyrata]
Length = 233
Score = 164 bits (415), Expect = 3e-038
Identities = 84/121 (69%), Positives = 92/121 (76%), Gaps = 8/121 (6%)
Frame = +3
Query: 120 ESEMSNGTDQSRKRAAPEDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGCKFRSRT 299
+S +SRKRAAP D NWLPPGWRVEDK+RTSGATAGSVDKYYYEP TG KFRSRT
Sbjct: 67 DSSSHQAESKSRKRAAPGD-NWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRT 125
Query: 300 EVLYYLEHGISKK-GSKKPDKADSNSDHLEGQGSNESSRKSKE*PPPPPPRPPSPPLKFD 476
EVLYYLEHG SK+ G+KK + D SDH EGQGSN + RK+KE PPPP PPL FD
Sbjct: 126 EVLYYLEHGTSKRGGTKKVENTDFLSDHFEGQGSNRARRKAKEPPPPP------PPLDFD 179
Query: 477 F 479
F
Sbjct: 180 F 180
Score = 89 bits (218), Expect = 2e-015
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = +1
Query: 478 FENPPEKVSWSVAKAGEEAWTPFVRDDKVQDSLRREWCTAFNVITTKNPTKLSS 639
F+NPPEKVSWS+AKAGEEAW P + D KVQDS+RR+W TAF IT +NP+KLSS
Sbjct: 180 FKNPPEKVSWSMAKAGEEAWIPIIGDVKVQDSVRRDWSTAFTFITNRNPSKLSS 233
>gi|15238389|ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsis
thaliana]
Length = 225
Score = 164 bits (414), Expect = 4e-038
Identities = 85/125 (68%), Positives = 92/125 (73%), Gaps = 15/125 (12%)
Frame = +3
Query: 129 MSNGTDQ--------SRKRAAPEDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGCK 284
M+NGTDQ SRKRAAP D NWLPPGWRVEDK+RTSGATAGSVDKYYYEP TG K
Sbjct: 55 MANGTDQVNHQTESKSRKRAAPGD-NWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRK 113
Query: 285 FRSRTEVLYYLEHGISKKGSKKPDKADSNSDHLEGQGSNESSRKSKE*PPPPPPRPPSPP 464
FRSRTEVLYYLEHG SK+G+KK + N DH EGQGSN +R + PPPP PP
Sbjct: 114 FRSRTEVLYYLEHGTSKRGTKKAENTYFNPDHFEGQGSNRVTRTATVPPPPP------PP 167
Query: 465 LKFDF 479
L FDF
Sbjct: 168 LDFDF 172
Score = 81 bits (198), Expect = 4e-013
Identities = 34/54 (62%), Positives = 45/54 (83%)
Frame = +1
Query: 478 FENPPEKVSWSVAKAGEEAWTPFVRDDKVQDSLRREWCTAFNVITTKNPTKLSS 639
F+NPP+KVSWS+A AGEE W P + D KVQDS+RR+W TAF IT++NP+K+S+
Sbjct: 172 FKNPPDKVSWSMANAGEEGWIPNIGDVKVQDSVRRDWSTAFTFITSRNPSKVSA 225
>gi|297815816|ref|XP_002875791.1| hypothetical protein ARALYDRAFT_485028
[Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 137 bits (344), Expect = 5e-030
Identities = 67/111 (60%), Positives = 78/111 (70%), Gaps = 4/111 (3%)
Frame = +3
Query: 147 QSRKRAAPEDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGCKFRSRTEVLYYLEHG 326
+SRKRA P D+NWLPP WR E +VRTSG AG+VDK+YYEPITG KFRS+ EVLYYLEHG
Sbjct: 22 KSRKRATPGDDNWLPPDWRTEVRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHG 81
Query: 327 ISKKGSKKPDKADSNSDHLEGQGSNESSRKSKE*PPPPPPRPPSPPLKFDF 479
KK KK + DS S+H EG+GS KS + PPP+ PL FDF
Sbjct: 82 APKKAVKKAENGDSLSEHSEGRGSIRRQTKSNKKANEPPPK----PLNFDF 128
Score = 58 bits (138), Expect = 4e-006
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +1
Query: 478 FENPPEKVSWSVAKAGEEAWTPFVRDDKVQDSLRREWCTAFNVITTKN 621
F N PEKV+W+ EEAW PF+ D K+Q+S+ ++W AF ++TT+N
Sbjct: 128 FLNVPEKVTWTGINGSEEAWLPFIGDYKIQESVSQDWGRAFTLVTTQN 175
>gi|15232591|ref|NP_190242.1| methyl-CPG-binding domain protein 5 [Arabidopsis
thaliana]
Length = 182
Score = 134 bits (335), Expect = 5e-029
Identities = 67/112 (59%), Positives = 79/112 (70%), Gaps = 5/112 (4%)
Frame = +3
Query: 147 QSRKRAAPEDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGCKFRSRTEVLYYLEHG 326
+SRKRA P D+NWLPP WR E +VRTSG AG+VDK+YYEPITG KFRS+ EVLYYLEHG
Sbjct: 22 KSRKRATPGDDNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHG 81
Query: 327 ISKKGS-KKPDKADSNSDHLEGQGSNESSRKSKE*PPPPPPRPPSPPLKFDF 479
KK S K + DS+S+H EG+GS KS + PPP+ PL FDF
Sbjct: 82 TPKKKSVKTAENGDSHSEHSEGRGSARRQTKSNKKVTEPPPK----PLNFDF 129
>gi|21554707|gb|AAM63666.1| unknown [Arabidopsis thaliana]
Length = 182
Score = 134 bits (335), Expect = 5e-029
Identities = 67/112 (59%), Positives = 79/112 (70%), Gaps = 5/112 (4%)
Frame = +3
Query: 147 QSRKRAAPEDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGCKFRSRTEVLYYLEHG 326
+SRKRA P D+NWLPP WR E +VRTSG AG+VDK+YYEPITG KFRS+ EVLYYLEHG
Sbjct: 22 KSRKRATPGDDNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHG 81
Query: 327 ISKKGS-KKPDKADSNSDHLEGQGSNESSRKSKE*PPPPPPRPPSPPLKFDF 479
KK S K + DS+S+H EG+GS KS + PPP+ PL FDF
Sbjct: 82 TPKKKSVKTAENGDSHSEHSEGRGSARRQTKSNKKVTEPPPK----PLNFDF 129
>gi|255584216|ref|XP_002532846.1| DNA binding protein, putative [Ricinus
communis]
Length = 234
Score = 98 bits (242), Expect = 3e-018
Identities = 44/81 (54%), Positives = 58/81 (71%)
Frame = +3
Query: 180 NWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGCKFRSRTEVLYYLEHGISKKGSKKPDK 359
NWLPPGW VED+VR SGATAG+VDKYY EP+TG +FRS+ EV Y+LE G KK + +
Sbjct: 98 NWLPPGWLVEDRVRASGATAGTVDKYYIEPVTGRRFRSKKEVQYFLETGTKKKTKRGMEN 157
Query: 360 ADSNSDHLEGQGSNESSRKSK 422
++ + + E GS +S + SK
Sbjct: 158 SEGDVNFTESPGSQKSKKASK 178
>gi|224059490|ref|XP_002299872.1| methyl binding domain protein [Populus
trichocarpa]
Length = 214
Score = 92 bits (227), Expect = 2e-016
Identities = 41/78 (52%), Positives = 57/78 (73%)
Frame = +3
Query: 174 DNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGCKFRSRTEVLYYLEHGISKKGSKKP 353
D +WLPPGW VED+VRTSGATAG+ DKYY EP++G +FRS+ +V YYLE G KK K
Sbjct: 70 DTSWLPPGWVVEDRVRTSGATAGTRDKYYIEPVSGRRFRSKKDVQYYLETGTLKKRGKVA 129
Query: 354 DKADSNSDHLEGQGSNES 407
+ D++++ E S+++
Sbjct: 130 ENVDADTNSAENSKSSKN 147
>gi|224106479|ref|XP_002314180.1| methyl binding domain protein [Populus
trichocarpa]
Length = 214
Score = 89 bits (218), Expect = 2e-015
Identities = 38/68 (55%), Positives = 53/68 (77%)
Frame = +3
Query: 174 DNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGCKFRSRTEVLYYLEHGISKKGSKKP 353
+ +WLPPGW VED++RTSGATAG+VDKYY +P +G KFRS+ +V YYLE G KK K
Sbjct: 70 ETSWLPPGWVVEDRIRTSGATAGTVDKYYIDPASGRKFRSKKDVQYYLETGTLKKKGKLT 129
Query: 354 DKADSNSD 377
+ +D++++
Sbjct: 130 ENSDADTN 137
>gi|297746071|emb|CBI16127.3| unnamed protein product [Vitis vinifera]
Length = 135
Score = 85 bits (209), Expect = 2e-014
Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = +3
Query: 162 AAPEDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGCKFRSRTEVLYYLEHG-ISKK 338
A+ E +WLPPGW VE +VR+SGA+AGS DKY+ EPITG +FRS+ EV YYLE G + KK
Sbjct: 2 ASVEREDWLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKK 61
Query: 339 GSKKPDKA 362
K PD +
Sbjct: 62 PKKNPDNS 69
>gi|297459231|ref|XP_001788037.2| PREDICTED: methyl-CpG binding domain protein
2-like [Bos taurus]
Length = 149
Score = 58 bits (139), Expect = 3e-006
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Frame = +3
Query: 186 LPPGWRVEDKVRTSGATAGSVDKYYYEPITGCKFRSRTEVLYYLEHGIS------KKGSK 347
LPPGW++E+ +R SG +AG D YY+ P +G KFRS+ ++ YL + + + G
Sbjct: 6 LPPGWKIEEVIRKSGLSAGKSDVYYFSP-SGKKFRSKPQLARYLGNTVDLSSFDFRTGKM 64
Query: 348 KPDKADSNSDHLEGQGSNESSRK 416
P K N L N++ K
Sbjct: 65 MPSKLQKNKQRLRNDPLNQNKGK 87
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,354,205,064,082
Number of Sequences: 15229318
Number of Extensions: 2354205064082
Number of Successful Extensions: 584002404
Number of sequences better than 0.0: 0
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