BLASTX 7.6.2
Query= UN19544 /QuerySize=1355
(1354 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G59380.1 | Symbols: MBD6, ATMBD6 | MBD6; DNA b... 164 1e-040
TAIR9_protein||AT3G46580.1 | Symbols: MBD05, MBD5, ATMBD5 | MBD5... 134 2e-031
>TAIR9_protein||AT5G59380.1 | Symbols: MBD6, ATMBD6 | MBD6; DNA binding / DNA
demethylase/ methyl-CpG binding | chr5:23952321-23953485 FORWARD
Length = 226
Score = 164 bits (414), Expect = 1e-040
Identities = 85/125 (68%), Positives = 92/125 (73%), Gaps = 15/125 (12%)
Frame = +3
Query: 129 MSNGTDQ--------SRKRAAPEDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGCK 284
M+NGTDQ SRKRAAP D NWLPPGWRVEDK+RTSGATAGSVDKYYYEP TG K
Sbjct: 55 MANGTDQVNHQTESKSRKRAAPGD-NWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRK 113
Query: 285 FRSRTEVLYYLEHGISKKGSKKPDKADSNSDHLEGQGSNESSRKSKE*PPPPPPRPPSPP 464
FRSRTEVLYYLEHG SK+G+KK + N DH EGQGSN +R + PPPP PP
Sbjct: 114 FRSRTEVLYYLEHGTSKRGTKKAENTYFNPDHFEGQGSNRVTRTATVPPPPP------PP 167
Query: 465 LKFDF 479
L FDF
Sbjct: 168 LDFDF 172
Score = 81 bits (198), Expect = 2e-015
Identities = 34/54 (62%), Positives = 45/54 (83%)
Frame = +1
Query: 478 FENPPEKVSWSVAKAGEEAWTPFVRDDKVQDSLRREWCTAFNVITTKNPTKLSS 639
F+NPP+KVSWS+A AGEE W P + D KVQDS+RR+W TAF IT++NP+K+S+
Sbjct: 172 FKNPPDKVSWSMANAGEEGWIPNIGDVKVQDSVRRDWSTAFTFITSRNPSKVSA 225
>TAIR9_protein||AT3G46580.1 | Symbols: MBD05, MBD5, ATMBD5 | MBD5
(METHYL-CPG-BINDING DOMAIN PROTEIN 5); DNA binding / methyl-CpG binding
| chr3:17148397-17149328 FORWARD
Length = 183
Score = 134 bits (335), Expect = 2e-031
Identities = 67/112 (59%), Positives = 79/112 (70%), Gaps = 5/112 (4%)
Frame = +3
Query: 147 QSRKRAAPEDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGCKFRSRTEVLYYLEHG 326
+SRKRA P D+NWLPP WR E +VRTSG AG+VDK+YYEPITG KFRS+ EVLYYLEHG
Sbjct: 22 KSRKRATPGDDNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHG 81
Query: 327 ISKKGS-KKPDKADSNSDHLEGQGSNESSRKSKE*PPPPPPRPPSPPLKFDF 479
KK S K + DS+S+H EG+GS KS + PPP+ PL FDF
Sbjct: 82 TPKKKSVKTAENGDSHSEHSEGRGSARRQTKSNKKVTEPPPK----PLNFDF 129
Score = 55 bits (132), Expect = 7e-008
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 478 FENPPEKVSWSVAKAGEEAWTPFVRDDKVQDSLRREWCTAFNVITTKNPTK 630
F N PEKV+W+ EEAW PF+ D K+Q+S+ ++W F ++T++N K
Sbjct: 129 FLNVPEKVTWTGINGSEEAWLPFIGDYKIQESVSQDWDRVFTLVTSQNAGK 179
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,102,396,634
Number of Sequences: 33410
Number of Extensions: 10102396634
Number of Successful Extensions: 333418700
Number of sequences better than 0.0: 0
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