BLASTX 7.6.2
Query= UN19547 /QuerySize=1036
(1035 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G34670.1 | Symbols: | 40S ribosomal protein S... 497 5e-141
TAIR9_protein||AT3G04840.1 | Symbols: | 40S ribosomal protein S... 490 8e-139
>TAIR9_protein||AT4G34670.1 | Symbols: | 40S ribosomal protein S3A (RPS3aB) |
chr4:16548724-16550222 FORWARD
Length = 263
Score = 497 bits (1279), Expect = 5e-141
Identities = 247/263 (93%), Positives = 256/263 (97%)
Frame = +1
Query: 88 MAVGKNKRISKGRKGGKKKIVDPFSKKDWYDIKAPSNFTHRNVGKTLVSRTQGTKIASEG 267
MAVGKNKRISKGRKGGKKK VDPFSKKDWYD+KAP +FT+RNVGKTLVSRTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEG 60
Query: 268 LKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTL 447
LKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTL
Sbjct: 61 LKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTL 120
Query: 448 IESHVDVKTTDNYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEASSSD 627
IE+HVDVKTTD YTLR+FCIAFTKRRANQVKRTCYAQSSQIRQIR KM EIM+KEASS D
Sbjct: 121 IEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCD 180
Query: 628 LKELVAKFIPESIGKEIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDV 807
LKELVAKFIPE+IG+EIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDV
Sbjct: 181 LKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDV 240
Query: 808 GVKVDRPADETVVEEPTEIIGA* 876
GVKVDRPADET+VEEPTEIIGA*
Sbjct: 241 GVKVDRPADETMVEEPTEIIGA* 263
>TAIR9_protein||AT3G04840.1 | Symbols: | 40S ribosomal protein S3A (RPS3aA) |
chr3:1329751-1331418 FORWARD
Length = 263
Score = 490 bits (1260), Expect = 8e-139
Identities = 243/263 (92%), Positives = 254/263 (96%)
Frame = +1
Query: 88 MAVGKNKRISKGRKGGKKKIVDPFSKKDWYDIKAPSNFTHRNVGKTLVSRTQGTKIASEG 267
MAVGKNKRISKGRKGGKKK VDPFSKKDWYD+KAPS FTHRNVGKTLVSRTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPSIFTHRNVGKTLVSRTQGTKIASEG 60
Query: 268 LKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTL 447
LKHRVFEVSLADLQ DEDNAYRKIRLRAEDVQGRNVL QFWGMDFTTDKLRSLVKKWQTL
Sbjct: 61 LKHRVFEVSLADLQGDEDNAYRKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTL 120
Query: 448 IESHVDVKTTDNYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEASSSD 627
IE+HVDVKTTD+YTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIR KMR+IM++EASS D
Sbjct: 121 IEAHVDVKTTDSYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMRDIMVREASSCD 180
Query: 628 LKELVAKFIPESIGKEIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDV 807
LK+LVAKFIPE+IG+EIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLM+VHGDY+AEDV
Sbjct: 181 LKDLVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDV 240
Query: 808 GVKVDRPADETVVEEPTEIIGA* 876
GVKVDRPADE VEEPTEIIGA*
Sbjct: 241 GVKVDRPADEMAVEEPTEIIGA* 263
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,102,396,634
Number of Sequences: 33410
Number of Extensions: 10102396634
Number of Successful Extensions: 333418700
Number of sequences better than 0.0: 0
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