BLASTX 7.6.2
Query= UN19587 /QuerySize=2885
(2884 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G16300.1 | Symbols: | FUNCTIONS IN: molecular... 829 3e-240
TAIR9_protein||AT5G16300.3 | Symbols: | FUNCTIONS IN: molecular... 758 5e-219
TAIR9_protein||AT5G16300.2 | Symbols: | FUNCTIONS IN: molecular... 710 2e-204
TAIR9_protein||AT5G16310.1 | Symbols: UCH1 | UCH1; ubiquitin thi... 580 2e-165
TAIR9_protein||AT1G65650.1 | Symbols: UCH2 | UCH2; ubiquitin thi... 245 2e-064
>TAIR9_protein||AT5G16300.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Vps51/Vps67 (InterPro:IPR014812); Has 204 Blast hits to 183 proteins in
76 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 34; Plants
- 24; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). |
chr5:5338119-5342186 FORWARD
Length = 1069
Score = 829 bits (2139), Expect = 3e-240
Identities = 431/496 (86%), Positives = 457/496 (92%), Gaps = 7/496 (1%)
Frame = -1
Query: 2884 VDKELEFLYAAMKKGNNDSEAIPPAIIIEKSLFMGRLLFALLNHSKHVPLILGSPRLWCR 2705
VDKELEFL AA+KK N DSEAIPPAIIIEKSLFMGRLLFALLNHSKHVPLILGSPRLWCR
Sbjct: 578 VDKELEFLCAAVKKENKDSEAIPPAIIIEKSLFMGRLLFALLNHSKHVPLILGSPRLWCR 637
Query: 2704 ETMNAVSDKLSSLLRQPRFSSNTAGTPDSPGKLLHTDPRKQSSLAVAALLKADEKTSPKF 2525
ETM AVSDKLSSLLRQPRFSSNT T DSPGK LHTD RKQ+SLAVAALL A+EKTSPKF
Sbjct: 638 ETMTAVSDKLSSLLRQPRFSSNTPATADSPGKQLHTDLRKQTSLAVAALLGAEEKTSPKF 697
Query: 2524 EELNKTMRDLCIKAHTLWIQWLSDELSAILLRDLRIDDGLSATTPLRGWEETIVKEEQGE 2345
EELN+TMRDLCIKAHTLWI+WLSDELSAILLRDLR DDGLSATTPLRGWEETIVK+EQ E
Sbjct: 698 EELNRTMRDLCIKAHTLWIKWLSDELSAILLRDLRSDDGLSATTPLRGWEETIVKQEQDE 757
Query: 2344 --SELKISLPSLPSLYIISFLCRASEEIHRIGGHVLDKSILQKFSSSLLEKIIIIYEDFL 2171
SELKISLPSLPSLY+ISFLCRASEEIHRIGGHVLD+SILQKF+SSLLEKI IIYEDFL
Sbjct: 758 SQSELKISLPSLPSLYMISFLCRASEEIHRIGGHVLDRSILQKFASSLLEKITIIYEDFL 817
Query: 2170 SAREADEPQISEKGVLQILLDLRFASDVLSGGDTSTNVEIQPKITMNRSAFRRKQGQQQT 1991
SAREA EPQISEKGVLQILLDLRFA+DVLSGGDTSTNVE PK T+NRSA+RR+Q QQ+T
Sbjct: 818 SAREASEPQISEKGVLQILLDLRFAADVLSGGDTSTNVE-TPKSTINRSAYRRRQDQQKT 876
Query: 1990 KSVNRGRIDGVISQLTQKLDPIDWLTYEPYLWENEKQSYLRHAVLFGFFVQLNRMYTDTS 1811
K VNRGRIDGV SQLTQKLDPIDWLTYEPYLWENEKQSYLRHAVLFGFFVQLNRMYTDT+
Sbjct: 877 KLVNRGRIDGVTSQLTQKLDPIDWLTYEPYLWENEKQSYLRHAVLFGFFVQLNRMYTDTA 936
Query: 1810 QKLPSNSESNIMPCSTVPRFKYLPISAPALSSRSTNKVSIPVTSNESSSRNSWNAFTNGE 1631
QKL N ESNIMPCSTVPRFKYLPISAPALSSRSTNKVSIPVTSN++S+RNSW AFTNGE
Sbjct: 937 QKLSINIESNIMPCSTVPRFKYLPISAPALSSRSTNKVSIPVTSNDASARNSWKAFTNGE 996
Query: 1630 HSQTNDLDDDSSFGVASPFLKSFMQAGS-GFGSILSDGQVGIFKDRSAAAMSTFGDIIPA 1454
SQT+DL+++S+FGVA KSFMQ + GSIL+DGQVGIFKDRSAAAMSTFGDI+PA
Sbjct: 997 QSQTSDLEENSNFGVA---FKSFMQESTLKLGSILTDGQVGIFKDRSAAAMSTFGDILPA 1053
Query: 1453 QAAGLLSSFTTTRYE* 1406
QAAGLLSSFT TR E*
Sbjct: 1054 QAAGLLSSFTNTRSE* 1069
>TAIR9_protein||AT5G16300.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Vps51/Vps67 (InterPro:IPR014812); Has 201 Blast hits to 182 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 34; Plants
- 23; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). |
chr5:5338119-5342068 FORWARD
Length = 1030
Score = 758 bits (1956), Expect = 5e-219
Identities = 391/445 (87%), Positives = 414/445 (93%), Gaps = 6/445 (1%)
Frame = -1
Query: 2884 VDKELEFLYAAMKKGNNDSEAIPPAIIIEKSLFMGRLLFALLNHSKHVPLILGSPRLWCR 2705
VDKELEFL AA+KK N DSEAIPPAIIIEKSLFMGRLLFALLNHSKHVPLILGSPRLWCR
Sbjct: 578 VDKELEFLCAAVKKENKDSEAIPPAIIIEKSLFMGRLLFALLNHSKHVPLILGSPRLWCR 637
Query: 2704 ETMNAVSDKLSSLLRQPRFSSNTAGTPDSPGKLLHTDPRKQSSLAVAALLKADEKTSPKF 2525
ETM AVSDKLSSLLRQPRFSSNT T DSPGK LHTD RKQ+SLAVAALL A+EKTSPKF
Sbjct: 638 ETMTAVSDKLSSLLRQPRFSSNTPATADSPGKQLHTDLRKQTSLAVAALLGAEEKTSPKF 697
Query: 2524 EELNKTMRDLCIKAHTLWIQWLSDELSAILLRDLRIDDGLSATTPLRGWEETIVKEEQGE 2345
EELN+TMRDLCIKAHTLWI+WLSDELSAILLRDLR DDGLSATTPLRGWEETIVK+EQ E
Sbjct: 698 EELNRTMRDLCIKAHTLWIKWLSDELSAILLRDLRSDDGLSATTPLRGWEETIVKQEQDE 757
Query: 2344 --SELKISLPSLPSLYIISFLCRASEEIHRIGGHVLDKSILQKFSSSLLEKIIIIYEDFL 2171
SELKISLPSLPSLY+ISFLCRASEEIHRIGGHVLD+SILQKF+SSLLEKI IIYEDFL
Sbjct: 758 SQSELKISLPSLPSLYMISFLCRASEEIHRIGGHVLDRSILQKFASSLLEKITIIYEDFL 817
Query: 2170 SAREADEPQISEKGVLQILLDLRFASDVLSGGDTSTNVEIQPKITMNRSAFRRKQGQQQT 1991
SAREA EPQISEKGVLQILLDLRFA+DVLSGGDTSTNVE PK T+NRSA+RR+Q QQ+T
Sbjct: 818 SAREASEPQISEKGVLQILLDLRFAADVLSGGDTSTNVE-TPKSTINRSAYRRRQDQQKT 876
Query: 1990 KSVNRGRIDGVISQLTQKLDPIDWLTYEPYLWENEKQSYLRHAVLFGFFVQLNRMYTDTS 1811
K VNRGRIDGV SQLTQKLDPIDWLTYEPYLWENEKQSYLRHAVLFGFFVQLNRMYTDT+
Sbjct: 877 KLVNRGRIDGVTSQLTQKLDPIDWLTYEPYLWENEKQSYLRHAVLFGFFVQLNRMYTDTA 936
Query: 1810 QKLPSNSESNIMPCSTVPRFKYLPISAPALSSRSTNKVSIPVTSNESSSRNSWNAFTNGE 1631
QKL N ESNIMPCSTVPRFKYLPISAPALSSRSTNKVSIPVTSN++S+RNSW AFTNGE
Sbjct: 937 QKLSINIESNIMPCSTVPRFKYLPISAPALSSRSTNKVSIPVTSNDASARNSWKAFTNGE 996
Query: 1630 HSQTNDLDDDSSFGVASPFLKSFMQ 1556
SQT+DL+++S+FGVA KSFMQ
Sbjct: 997 QSQTSDLEENSNFGVA---FKSFMQ 1018
>TAIR9_protein||AT5G16300.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Vps51/Vps67 (InterPro:IPR014812); Has 199 Blast hits to 182 proteins in
76 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 34; Plants
- 24; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). |
chr5:5338119-5342186 FORWARD
Length = 1035
Score = 710 bits (1831), Expect = 2e-204
Identities = 366/408 (89%), Positives = 383/408 (93%), Gaps = 3/408 (0%)
Frame = -1
Query: 2884 VDKELEFLYAAMKKGNNDSEAIPPAIIIEKSLFMGRLLFALLNHSKHVPLILGSPRLWCR 2705
VDKELEFL AA+KK N DSEAIPPAIIIEKSLFMGRLLFALLNHSKHVPLILGSPRLWCR
Sbjct: 578 VDKELEFLCAAVKKENKDSEAIPPAIIIEKSLFMGRLLFALLNHSKHVPLILGSPRLWCR 637
Query: 2704 ETMNAVSDKLSSLLRQPRFSSNTAGTPDSPGKLLHTDPRKQSSLAVAALLKADEKTSPKF 2525
ETM AVSDKLSSLLRQPRFSSNT T DSPGK LHTD RKQ+SLAVAALL A+EKTSPKF
Sbjct: 638 ETMTAVSDKLSSLLRQPRFSSNTPATADSPGKQLHTDLRKQTSLAVAALLGAEEKTSPKF 697
Query: 2524 EELNKTMRDLCIKAHTLWIQWLSDELSAILLRDLRIDDGLSATTPLRGWEETIVKEEQGE 2345
EELN+TMRDLCIKAHTLWI+WLSDELSAILLRDLR DDGLSATTPLRGWEETIVK+EQ E
Sbjct: 698 EELNRTMRDLCIKAHTLWIKWLSDELSAILLRDLRSDDGLSATTPLRGWEETIVKQEQDE 757
Query: 2344 --SELKISLPSLPSLYIISFLCRASEEIHRIGGHVLDKSILQKFSSSLLEKIIIIYEDFL 2171
SELKISLPSLPSLY+ISFLCRASEEIHRIGGHVLD+SILQKF+SSLLEKI IIYEDFL
Sbjct: 758 SQSELKISLPSLPSLYMISFLCRASEEIHRIGGHVLDRSILQKFASSLLEKITIIYEDFL 817
Query: 2170 SAREADEPQISEKGVLQILLDLRFASDVLSGGDTSTNVEIQPKITMNRSAFRRKQGQQQT 1991
SAREA EPQISEKGVLQILLDLRFA+DVLSGGDTSTNVE PK T+NRSA+RR+Q QQ+T
Sbjct: 818 SAREASEPQISEKGVLQILLDLRFAADVLSGGDTSTNVE-TPKSTINRSAYRRRQDQQKT 876
Query: 1990 KSVNRGRIDGVISQLTQKLDPIDWLTYEPYLWENEKQSYLRHAVLFGFFVQLNRMYTDTS 1811
K VNRGRIDGV SQLTQKLDPIDWLTYEPYLWENEKQSYLRHAVLFGFFVQLNRMYTDT+
Sbjct: 877 KLVNRGRIDGVTSQLTQKLDPIDWLTYEPYLWENEKQSYLRHAVLFGFFVQLNRMYTDTA 936
Query: 1810 QKLPSNSESNIMPCSTVPRFKYLPISAPALSSRSTNKVSIPVTSNESS 1667
QKL N ESNIMPCSTVPRFKYLPISAPALSSRSTNKVSIPVTSN++S
Sbjct: 937 QKLSINIESNIMPCSTVPRFKYLPISAPALSSRSTNKVSIPVTSNDAS 984
Score = 80 bits (197), Expect = 5e-015
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = -1
Query: 1540 GSILSDGQVGIFKDRSAAAMSTFGDIIPAQAAGLLSSFTTTRYE* 1406
GSIL+DGQVGIFKDRSAAAMSTFGDI+PAQAAGLLSSFT TR E*
Sbjct: 991 GSILTDGQVGIFKDRSAAAMSTFGDILPAQAAGLLSSFTNTRSE* 1035
>TAIR9_protein||AT5G16310.1 | Symbols: UCH1 | UCH1; ubiquitin thiolesterase |
chr5:5342579-5344153 REVERSE
Length = 335
Score = 580 bits (1494), Expect = 2e-165
Identities = 291/334 (87%), Positives = 314/334 (94%), Gaps = 3/334 (0%)
Frame = +2
Query: 188 MFWLPVESDPGVFTEIIQQMQVKGVQVEELYSLDITSLDEIRPVYGLVLLYKWRPEEKES 367
M WLPVESDPG+FTEIIQQMQVKGVQVEELYSLD SLDEIRPVYGL+LLYKWRPEEKE+
Sbjct: 1 MSWLPVESDPGIFTEIIQQMQVKGVQVEELYSLDFNSLDEIRPVYGLILLYKWRPEEKEN 60
Query: 368 RVVITEPNPNFFFASQIINSACATQALLSVLMNSSSIELGSELTELKDFAKDFPPELKGL 547
RVVITEPNPNFFFASQIIN+ACATQA+LSVLMNSSSI++GSEL+ELK FAK+FPPELKGL
Sbjct: 61 RVVITEPNPNFFFASQIINNACATQAILSVLMNSSSIDIGSELSELKQFAKEFPPELKGL 120
Query: 548 AISNNEAIRAAHNTFARPDSSSTTTEEDEIAARRKKKEEEDDDVYHYISYLPVDGILYEL 727
AI+NNEAIRAAHNTFARPD SS E++E+AA K +EDDDVYHYISYLPVDGILYEL
Sbjct: 121 AINNNEAIRAAHNTFARPDPSS-IMEDEELAA--AKNLDEDDDVYHYISYLPVDGILYEL 177
Query: 728 DGLKEGPISLGQCLGEPDGIEWLKMVQPVVQERIDRYMQNEIRFSLLAVVKNRKEMYRAE 907
DGLKEGPISLGQCLGEP+GIEWL+MVQPVVQE+IDRY QNEIRFSLLAVVKNRKEMY AE
Sbjct: 178 DGLKEGPISLGQCLGEPEGIEWLRMVQPVVQEQIDRYSQNEIRFSLLAVVKNRKEMYVAE 237
Query: 908 LKEYQMKRERILQQVGTLQADKYAEKSSYEALDKSLSEVNVGIETVSQKIVMEEERSKNW 1087
LKEYQ KRER+LQQ+G LQADKYAEKSSYEALD+ LSEVN+GIETVSQKIVMEEE+SKNW
Sbjct: 238 LKEYQRKRERVLQQLGALQADKYAEKSSYEALDRELSEVNIGIETVSQKIVMEEEKSKNW 297
Query: 1088 KKENLRRKHNYVLFLFNFLKILADKKKLKPLIDK 1189
KKEN+RRKHNYV FLFNFLKILADKKKLKPLI K
Sbjct: 298 KKENMRRKHNYVPFLFNFLKILADKKKLKPLIAK 331
>TAIR9_protein||AT1G65650.1 | Symbols: UCH2 | UCH2; ubiquitin thiolesterase/
ubiquitin-specific protease | chr1:24415172-24417466 REVERSE
Length = 331
Score = 245 bits (623), Expect = 2e-064
Identities = 119/208 (57%), Positives = 158/208 (75%), Gaps = 5/208 (2%)
Frame = +2
Query: 575 AAHNTFARPDSSSTTTEEDEIAARRKKKEEEDDDVYHYISYLPVDGILYELDGLKEGPIS 754
A +N+ + + ++ + +K +DDDVYH+ISY+PVDG+LYELDGLKEGPIS
Sbjct: 121 AINNSDSIRAAHNSFARPEPFVPEEQKAATKDDDVYHFISYIPVDGVLYELDGLKEGPIS 180
Query: 755 LGQCLGEPDGIEWLKMVQPVVQERIDRYMQNEIRFSLLAVVKNRKEMYRAELKEYQMKRE 934
LG C G+ GIEWL+MVQPV+QERI+RY Q+EIRF+LLAV+KNRK++Y AELKE Q +RE
Sbjct: 181 LGPCPGDQTGIEWLQMVQPVIQERIERYSQSEIRFNLLAVIKNRKDIYTAELKELQRQRE 240
Query: 935 RILQQVGTLQADKYAEKSSYEALDKSLSEVNVGIETVSQKIVMEEERSKNWKKENLRRKH 1114
++LQQ T +KS EA++ ++EV GIE S KIVMEEE+ W+ EN+RRKH
Sbjct: 241 QLLQQANTC-----VDKSEAEAVNALIAEVGSGIEAASDKIVMEEEKFMKWRTENIRRKH 295
Query: 1115 NYVLFLFNFLKILADKKKLKPLIDKARR 1198
NY+ FLFNFLK+LA+KK+LKPLI+KA++
Sbjct: 296 NYIPFLFNFLKLLAEKKQLKPLIEKAKK 323
Score = 191 bits (485), Expect = 2e-048
Identities = 89/155 (57%), Positives = 122/155 (78%), Gaps = 5/155 (3%)
Frame = +2
Query: 188 MFWLPVESDPGVFTEIIQQMQVKGVQVEELYSLDITSLDEIRPVYGLVLLYKWRPEEKES 367
M W +ESDPGVFTE+IQQMQVKGVQVEELYSLD SL+ +RPVYGL+ L+KW+ EK+
Sbjct: 1 MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDSDSLNNLRPVYGLIFLFKWQAGEKDE 60
Query: 368 RVVITEPNPNFFFASQIINSACATQALLSVLMNSSSIELGSELTELKDFAKDFPPELKGL 547
R I + N FFA+Q+IN+ACATQA+L++L+NS +++G EL+ LK+F K+FP +LKGL
Sbjct: 61 RPTIQDQVSNLFFANQVINNACATQAILAILLNSPEVDIGPELSALKEFTKNFPSDLKGL 120
Query: 548 AISNNEAIRAAHNTFAR-----PDSSSTTTEEDEI 637
AI+N+++IRAAHN+FAR P+ T++D++
Sbjct: 121 AINNSDSIRAAHNSFARPEPFVPEEQKAATKDDDV 155
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,194,490,410
Number of Sequences: 33410
Number of Extensions: 10194490410
Number of Successful Extensions: 338512619
Number of sequences better than 0.0: 0
|
