BLASTX 7.6.2
Query= UN19597 /QuerySize=1367
(1366 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G39580.1 | Symbols: | kelch repeat-containing... 173 3e-043
TAIR9_protein||AT5G49000.2 | Symbols: | FUNCTIONS IN: molecular... 164 2e-040
TAIR9_protein||AT4G39560.1 | Symbols: | kelch repeat-containing... 163 4e-040
TAIR9_protein||AT4G39560.2 | Symbols: | kelch repeat-containing... 163 4e-040
TAIR9_protein||AT4G39600.1 | Symbols: | kelch repeat-containing... 150 2e-036
TAIR9_protein||AT3G46050.1 | Symbols: | kelch repeat-containing... 148 1e-035
TAIR9_protein||AT5G02980.1 | Symbols: | kelch repeat-containing... 147 2e-035
TAIR9_protein||AT5G39560.1 | Symbols: | FUNCTIONS IN: molecular... 141 1e-033
TAIR9_protein||AT2G21950.1 | Symbols: SKIP6 | SKIP6 (SKP1 intera... 132 8e-031
TAIR9_protein||AT4G33900.1 | Symbols: | kelch repeat-containing... 96 4e-020
TAIR9_protein||AT4G23580.1 | Symbols: | kelch repeat-containing... 96 5e-020
TAIR9_protein||AT4G34170.1 | Symbols: | kelch repeat-containing... 87 3e-017
TAIR9_protein||AT4G39550.1 | Symbols: | kelch repeat-containing... 80 3e-015
TAIR9_protein||AT5G49000.1 | Symbols: | FUNCTIONS IN: molecular... 79 6e-015
TAIR9_protein||AT1G19930.1 | Symbols: | kelch repeat-containing... 79 8e-015
TAIR9_protein||AT4G39570.1 | Symbols: | kelch repeat-containing... 78 1e-014
TAIR9_protein||AT4G05620.1 | Symbols: | F-box family protein | ... 75 1e-013
TAIR9_protein||AT4G19870.1 | Symbols: | kelch repeat-containing... 74 1e-013
>TAIR9_protein||AT4G39580.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18385684-18386811 REVERSE
Length = 376
Score = 173 bits (437), Expect = 3e-043
Identities = 121/311 (38%), Positives = 163/311 (52%), Gaps = 28/311 (9%)
Frame = +3
Query: 63 EQKKKRRRVESPSSSGLMSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASPEMYETR 242
EQKK V SP+++ + LP D++L+SL+R+SR Y S+VSKS RSL+ASPE+Y+TR
Sbjct: 9 EQKKTLSLVPSPTTN--LFLPDDILLSSLSRISRLYYPTFSLVSKSFRSLIASPELYQTR 66
Query: 243 SRMGLREECIYVCLGTSFGTKPLGWFILRK-------GVQGNNRLIPIPIPSFPSPRRAT 401
S +G E C+YV L L W+ L + G + L+PI P ++
Sbjct: 67 SILGRTESCLYVSL-RLLNDSNLRWYTLCRVPDRKLTNFSGGHLLVPILSRYAPPAHWSS 125
Query: 402 YVSMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSQLPSMRFARCEAKAGVLDGKIYVMGG 581
V++ IY IGG I +S VS LDC+ W + PSMR AR A VLDGKIYV GG
Sbjct: 126 VVAVDYNIYAIGGPINDAPSSSVSVLDCQCEKWREAPSMRVARNYPTATVLDGKIYVAGG 185
Query: 582 CDDVFSGDNPEVFDPKTQTWSSVCIPDPV-MNKEVCKVVGPDNNISF-------KFWSEK 737
C+D S D EVFDPKTQTW SV P + V K VG + + ++
Sbjct: 186 CEDCTSLDCIEVFDPKTQTWDSVASPGTERCERLVYKSVGIEGKYHLFGGAGHVAYDPKE 245
Query: 738 GLWNDFFLN---PREEDCCCAIDRLLFSCDFDGRIKWCDPLSGVRKGSMEWYTVNGLEDL 908
G W+ ++ R C I+ +LF + D KW D KG W + GLE L
Sbjct: 246 GRWDSVGMDMEMGRTWVSYCVINNILFYYN-DREFKWYD-----YKGRF-WRKLMGLERL 298
Query: 909 LGFLKFDRTNI 941
+ FL + R N+
Sbjct: 299 IKFLCYSRVNL 309
>TAIR9_protein||AT5G49000.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type
beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein
match is: kelch repeat-containing F-box family protein
(TAIR:AT4G39550.1); Has 5235 Blast hits to 3308 proteins in 165
species: Archae - 10; Bacteria - 167; Metazoa - 4114; Fungi - 13;
Plants - 659; Viruses - 110; Other Eukaryotes - 162 (source: NCBI
BLink). | chr5:19864527-19865645 FORWARD
Length = 373
Score = 164 bits (413), Expect = 2e-040
Identities = 120/330 (36%), Positives = 169/330 (51%), Gaps = 34/330 (10%)
Frame = +3
Query: 54 SAVEQKKKRRRVE-SPSSSGLMSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASPEM 230
S+ E+K+K+R +E SP S+ SLP D++++ LARVSR Y LS+VSKS R+LV SPE+
Sbjct: 2 SSPERKRKKRSLEPSPESTPNPSLPDDLIVSILARVSRLYYPILSLVSKSSRTLVTSPEL 61
Query: 231 YETRSRMGLREECIYVCLGTSFGTKPLGWFILRKGVQ-------GNNRLIPIPIPSFPSP 389
Y+TRS E C+YVCL P + + RK Q ++ + PIP+ S
Sbjct: 62 YKTRSFFNRTESCLYVCLDFPPDPNPRWFTLYRKPNQNITEKTKNSSGFVLAPIPNHHS- 120
Query: 390 RRATYVSMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSQLPSMRFARCEAKAGVLDGKIY 569
++ V++G IY IGG IE +S+VS LDCR+HTW + PSMR R A V+DGKIY
Sbjct: 121 HSSSIVAIGSNIYAIGGSIENAPSSKVSILDCRSHTWHEAPSMRMKRNYPAANVVDGKIY 180
Query: 570 VMGGCDDVFSGDNPEVFDPKTQTWSSVCIP--------DPVMNKEVCKVVGPDNNISFK- 722
V GG ++ S EVFD KTQTW V P V+ E+ + D +++K
Sbjct: 181 VAGGLEEFDSSKWMEVFDIKTQTWEFVLSPLAERFIYRSLVIEGEI--YIFGDKVVTYKP 238
Query: 723 ---FWSEKGLWNDFFLNPREEDCCCAIDRLLFSCDFDGRIKWCDPLSGVRKGSMEWYTVN 893
W G L C ID +L+ C G IKW + W +
Sbjct: 239 KEDRWGGVGEHQSMDLGLFFHS-YCVIDNVLY-CYRPGGIKWYE------SEKRSWRKLR 290
Query: 894 GLEDLLGFLKFDRTNINTILFVGESADVWN 983
GL+ G K + + + G+ A +W+
Sbjct: 291 GLK---GLSKLASSCVKLADYGGKMALLWD 317
>TAIR9_protein||AT4G39560.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18382940-18383740 REVERSE
Length = 267
Score = 163 bits (410), Expect = 4e-040
Identities = 93/208 (44%), Positives = 123/208 (59%), Gaps = 5/208 (2%)
Frame = +3
Query: 51 ASAVEQKKKRRRVE-----SPSSSGLMSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLV 215
+S V++ KK+ +P S+ ++SLP D++++ LARVSR DY LS+VSKS RSL+
Sbjct: 2 SSPVKKMKKKTTTSPILSPTPHSTQILSLPVDLLISILARVSRLDYPILSLVSKSFRSLI 61
Query: 216 ASPEMYETRSRMGLREECIYVCLGTSFGTKPLGWFILRKGVQGNNRLIPIPIPSFPSPRR 395
ASPE+YETRS +G E C+Y+CLG P + + RK + + I IP+
Sbjct: 62 ASPELYETRSLLGRTESCLYLCLGIPSDFNPRWFTLCRKPKPSGHVMAAISIPNSRPVHC 121
Query: 396 ATYVSMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSQLPSMRFARCEAKAGVLDGKIYVM 575
+ V++G IY IGG I +S VS LDCR HTW P+M R A V+DGKIYV
Sbjct: 122 SGLVAVGSDIYNIGGSIINEHSSSVSILDCRYHTWRDAPNMLVERNSHAANVIDGKIYVA 181
Query: 576 GGCDDVFSGDNPEVFDPKTQTWSSVCIP 659
GG D S + EVFD KTQTW V P
Sbjct: 182 GGSRDSNSSNWMEVFDIKTQTWEPVLNP 209
>TAIR9_protein||AT4G39560.2 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18382940-18383740 REVERSE
Length = 267
Score = 163 bits (410), Expect = 4e-040
Identities = 93/208 (44%), Positives = 123/208 (59%), Gaps = 5/208 (2%)
Frame = +3
Query: 51 ASAVEQKKKRRRVE-----SPSSSGLMSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLV 215
+S V++ KK+ +P S+ ++SLP D++++ LARVSR DY LS+VSKS RSL+
Sbjct: 2 SSPVKKMKKKTTTSPILSPTPHSTQILSLPVDLLISILARVSRLDYPILSLVSKSFRSLI 61
Query: 216 ASPEMYETRSRMGLREECIYVCLGTSFGTKPLGWFILRKGVQGNNRLIPIPIPSFPSPRR 395
ASPE+YETRS +G E C+Y+CLG P + + RK + + I IP+
Sbjct: 62 ASPELYETRSLLGRTESCLYLCLGIPSDFNPRWFTLCRKPKPSGHVMAAISIPNSRPVHC 121
Query: 396 ATYVSMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSQLPSMRFARCEAKAGVLDGKIYVM 575
+ V++G IY IGG I +S VS LDCR HTW P+M R A V+DGKIYV
Sbjct: 122 SGLVAVGSDIYNIGGSIINEHSSSVSILDCRYHTWRDAPNMLVERNSHAANVIDGKIYVA 181
Query: 576 GGCDDVFSGDNPEVFDPKTQTWSSVCIP 659
GG D S + EVFD KTQTW V P
Sbjct: 182 GGSRDSNSSNWMEVFDIKTQTWEPVLNP 209
>TAIR9_protein||AT4G39600.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18389436-18390539 REVERSE
Length = 368
Score = 150 bits (378), Expect = 2e-036
Identities = 86/189 (45%), Positives = 114/189 (60%), Gaps = 15/189 (7%)
Frame = +3
Query: 117 SLPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASPEMYETRSRMGLREECIYVCLGTSF 296
SLP D+V++ LARVSR Y LS+VSKS RSL+ASP++Y+TRS +G E C+Y+CL S
Sbjct: 16 SLPEDLVVSCLARVSRLYYPTLSLVSKSFRSLIASPDLYKTRSLLGRTESCLYLCLRYSP 75
Query: 297 GTKPLGWFIL-----------RKGVQGNNRLIPIPIPSFPSPRRATYVSMGCGIYVIGGR 443
P WF L K N L+PIPI + P ++ V++G +Y I G
Sbjct: 76 EDNP-RWFTLCRKPNRRTLSKEKNESSGNLLVPIPIINSPPLEWSSIVAVGSHLYAINGP 134
Query: 444 IEAVTTSRVSFLDCRTHTWSQLPSMRFARCEAKAGVLDGKIYVMGGCDDVFSGDNPEVFD 623
IE S VSFLDCR+HTW + PSMR A ++ LDGK+Y+ G ++V S + +VF
Sbjct: 135 IEDAPCSNVSFLDCRSHTWLEAPSMRVAHTNSQ---LDGKMYLAGSSENVDSLNCIQVFS 191
Query: 624 PKTQTWSSV 650
KTQTW V
Sbjct: 192 TKTQTWKPV 200
>TAIR9_protein||AT3G46050.1 | Symbols: | kelch repeat-containing F-box family
protein | chr3:16916072-16917184 FORWARD
Length = 371
Score = 148 bits (371), Expect = 1e-035
Identities = 100/264 (37%), Positives = 141/264 (53%), Gaps = 14/264 (5%)
Frame = +3
Query: 69 KKKRRRVESPSSSGLMSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASPEMYETRSR 248
K+K + SP + SLP D+VLN LARVSR Y LS+V K RSL+ S E++ TRS
Sbjct: 4 KEKNKSSNSPPPTSFSSLPDDIVLNCLARVSRFHYPTLSLVCKGFRSLLDSRELHATRSC 63
Query: 249 MGLREECIYVCLG---TSFGTKPLGWFILRKGVQGNNRLIPIPIPSFPSPRRATYVSMGC 419
+G E +YVCL + P WFI+ + +L PIP + S +T VS+G
Sbjct: 64 IGKTESFLYVCLDLHRNCYPDCPPRWFIVSPITK--QKLKPIPSVTCQS---STVVSIGS 118
Query: 420 GIYVIGGRIEAVTTSRVSFLDCRTHTWSQLPSMRFARCEAKAGVLDGKIYVMGGCDDVFS 599
IY+IGG ++ ++ R+ LDC +H W +LP MR R A A V++ KIYV+GG
Sbjct: 119 KIYIIGGFVDGHSSRRLIVLDCPSHGWRRLPEMRVPRQNAAADVINDKIYVIGGSSSNNI 178
Query: 600 GDNPEVFDPKTQTWSSVCIPDPVMNKEVCKVVGPDNNISFKFWSEKGLWNDFFLNPREED 779
D EV+DPKTQTW V +P + VV +S K + GL LN ++
Sbjct: 179 EDWGEVYDPKTQTWEPV-LPTTLDLTVQMSVVPGSLVMSGKVYDMNGL----KLNFQKNI 233
Query: 780 CCCAIDRLLFSCDF-DGRIKWCDP 848
C I+ ++ +G + WC+P
Sbjct: 234 CLVEIENMMCQTKVCEGVLVWCEP 257
>TAIR9_protein||AT5G02980.1 | Symbols: | kelch repeat-containing F-box family
protein | chr5:697993-699000 FORWARD
Length = 336
Score = 147 bits (369), Expect = 2e-035
Identities = 96/273 (35%), Positives = 140/273 (51%), Gaps = 18/273 (6%)
Frame = +3
Query: 96 PSSSGLMSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASPEMYETRSRMGLREECIY 275
P S SLPYD++LN LARVSR Y LS+VSK +SL+AS E+Y TRSR+G E +Y
Sbjct: 9 PPSRTFSSLPYDIILNCLARVSRYHYPTLSLVSKEFQSLIASRELYATRSRIGKTERFLY 68
Query: 276 VCLGTSFGTKPLGWFILRKGVQGNNRLIPIPIPSFPSPRRATYVSMGCGIYVIGGRIEAV 455
+CL + WF L V +L+P+P+ ++ +T S IY+IGG +
Sbjct: 69 ICLNLTKSNPKYRWFTL-PPVPNEQKLLPVPLFTY-HLNSSTVSSTDSEIYIIGGLVWGN 126
Query: 456 TTSRVSFLDCRTHTWSQLPSMRFARCEAKAGVLDGKIYVMGGCDDVFSGDNPEVFDPKTQ 635
+ + S DCR+H +LP MRF R A A V+DGKIYV+GG + EV+DP TQ
Sbjct: 127 RSKKASIFDCRSHQTRRLPKMRFPRASAAAHVIDGKIYVIGGGE-----IRGEVYDPTTQ 181
Query: 636 TWSSVCIPDPVMNKEVCKVVGPDNNISFKFWSEKGLWNDFFL--------NPREEDCCCA 791
TW + + E C+ V + ++ F L F+ +PR +D A
Sbjct: 182 TWLTTPVDH---TTEECQKVYDKHGVNICFVEIDNLLCQTFVFNGKLYWRHPRGDDFGWA 238
Query: 792 IDRLLFSCDFDGRIKWCDPLSGVRKGSMEWYTV 890
+ + F + + D G R+ ++ W +V
Sbjct: 239 RVKGVEQELFRNHLSYVDKSGGGRRVTVWWKSV 271
>TAIR9_protein||AT5G39560.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; LOCATED IN: chloroplast; EXPRESSED IN: shoot, cauline leaf,
stamen, leaf; EXPRESSED DURING: LP.04 four leaves visible, petal
differentiation and expansion stage, LP.08 eight leaves visible;
CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810),
Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch
repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089),
Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis
thaliana protein match is: kelch repeat-containing F-box family protein
(TAIR:AT4G19870.2); Has 2231 Blast hits to 1863 proteins in 132
species: Archae - 8; Bacteria - 107; Metazoa - 1341; Fungi - 6; Plants
- 633; Viruses - 27; Other Eukaryotes - 109 (source: NCBI BLink). |
chr5:15841885-15843096 REVERSE
Length = 404
Score = 141 bits (354), Expect = 1e-033
Identities = 85/205 (41%), Positives = 123/205 (60%), Gaps = 9/205 (4%)
Frame = +3
Query: 54 SAVEQKKKRRRVESPSSSGLMSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASPEMY 233
S VEQ K++R + S S LMSLPY+++ N LAR+S+ Y LS+VSKS SL++SP++Y
Sbjct: 11 SEVEQPKEKRSLSSEPPS-LMSLPYEIIENILARISKWSYPNLSLVSKSFLSLLSSPQLY 69
Query: 234 ETRSRMGLREECIYVCLGTSFGTKPLGWFILRK------GVQGNNRLIPIPIPSFPSPRR 395
+TRS +G E C+Y CL ++ + P + + K G + IP+PS R
Sbjct: 70 KTRSEIGTTEPCLYFCLESANHSSPQWYTLWMKPDETLTGTGTIHDYSLIPLPSSSPVLR 129
Query: 396 ATYVSMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSQLPSMRFARCEAKAGVLDGKIYVM 575
+ V++G IYVIGG +S V DCR++TW P+M AR + A ++D +IYV+
Sbjct: 130 TSTVAVGSEIYVIGGHFN--RSSSVRIFDCRSNTWRDGPNMTVARSDPVAVLIDQRIYVL 187
Query: 576 GGCDDVFSGDNPEVFDPKTQTWSSV 650
GG + S D EVFD KTQTW ++
Sbjct: 188 GGREMDESDDWFEVFDIKTQTWRAL 212
>TAIR9_protein||AT2G21950.1 | Symbols: SKIP6 | SKIP6 (SKP1 interacting partner
6); ubiquitin-protein ligase | chr2:9353526-9354644 REVERSE
Length = 373
Score = 132 bits (330), Expect = 8e-031
Identities = 85/187 (45%), Positives = 106/187 (56%), Gaps = 8/187 (4%)
Frame = +3
Query: 120 LPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASPEMYETRSRMGLREECIYVCLGTSFG 299
L D+ L+ LARV R Y LS+VSK+ RSL SP +Y TR+ +G E +YV +
Sbjct: 24 LSEDVALSCLARVPRCHYPILSLVSKTFRSLPTSPLLYATRALVGATENILYVAIRIP-P 82
Query: 300 TKPLGWFILRKGVQGN--NRLIPIPIPSFPSPR--RATYVSMGCGIYVIGGRIEAVTTSR 467
WF L N N + +PIPS PSP + YV + IYVIGG I V +S
Sbjct: 83 ESGACWFTLLHRTLSNSTNSKMLVPIPSCPSPSLVGSAYVVVDSEIYVIGGSIRDVPSSS 142
Query: 468 VSFLDCRTHTWSQLPSMRFARCEAKAGVLDGKIYVMGGC--DDVFSGDN-PEVFDPKTQT 638
V LDCR HTW ++ +MR R A AGV+DGKIYV+GGC D+ N E+FD KTQT
Sbjct: 143 VWVLDCRFHTWRRVSNMRVGREFAAAGVIDGKIYVIGGCVVDNWARSINWAEMFDIKTQT 202
Query: 639 WSSVCIP 659
W V P
Sbjct: 203 WEPVASP 209
>TAIR9_protein||AT4G33900.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:16251572-16252711 REVERSE
Length = 380
Score = 96 bits (238), Expect = 4e-020
Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +3
Query: 90 ESPSSSGLMSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASPEMYETRSRMGLREEC 269
E PS + LP D+V N LARVSR Y LS+VSK R L+AS E+Y+TR +G E C
Sbjct: 5 EEPSIKRFLMLPDDLVFNCLARVSRLHYPTLSLVSKKFRFLLASKELYQTRILLGGTESC 64
Query: 270 IYVCLGTSFGTKPLGWFILRKGVQGNNR-LIPIPIPSFPSPRRATYVSMGCGIYVIGGRI 446
+YVC+ ++ L WFI+ +G + + L+PI P+F S +V +G IY IGG
Sbjct: 65 LYVCVRLHTDSEQLHWFIIYQGPNSSKKVLVPISSPNFTSAALPGFVVVGHEIYAIGGGS 124
Query: 447 E 449
E
Sbjct: 125 E 125
Score = 75 bits (184), Expect = 7e-014
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Frame = +3
Query: 462 SRVSFLDCRTHTWSQLPSMRFARCEAKAGVLDGKIYVMGGCDDVFSGDNPEVFDPKTQTW 641
S V +D R+HTW + PSMR AR A LDG+IYV GGC+++ S + E+FD KTQTW
Sbjct: 143 SSVMVMDSRSHTWREAPSMRVARVFPSACTLDGRIYVTGGCENLNSMNWMEIFDTKTQTW 202
Query: 642 SSVCIPDPVMNKEVCK 689
+ IP ++EVCK
Sbjct: 203 EFLQIP----SEEVCK 214
>TAIR9_protein||AT4G23580.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:12304246-12305397 REVERSE
Length = 384
Score = 96 bits (237), Expect = 5e-020
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Frame = +3
Query: 114 MSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASPEMYETRSRMGLREECIYVCLGTS 293
+ LP D+VLN LAR+SR Y LS+VSK+ RSL+AS E+Y+TR +G E C+Y CL
Sbjct: 17 LMLPDDLVLNCLARISRLHYPTLSLVSKTFRSLLASTELYQTRILLGRTESCLYACLRLR 76
Query: 294 FGTKPLGWFIL-RKGVQGNNRLIPIPIPSFPSPRRATYVSMGCGIYVIGG 440
++ L WFIL + N L+PI PSF SP V +G +Y IGG
Sbjct: 77 TDSELLHWFILCHRPHSSKNVLVPISSPSFTSPSLPGVVVVGPDVYAIGG 126
>TAIR9_protein||AT4G34170.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:16368087-16369025 FORWARD
Length = 294
Score = 87 bits (213), Expect = 3e-017
Identities = 50/107 (46%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Frame = +3
Query: 339 QGNNRLIPIPIPSFPSPRRATYVSMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSQLPSM 518
Q ++R I + I S P+ A +G I IGG I++ T S V +D R+HTW + PSM
Sbjct: 68 QYSSRKILVQILS-PNSTSAGIAVVGPNIDAIGGGIKSNTLSSVMVMDSRSHTWREAPSM 126
Query: 519 RFARCEAKAGVLDGKIYVMGGCDDVFSGDNPEVFDPKTQTWSSVCIP 659
R R LDGKIYVMGGCD++ S + EVFD KTQTW + IP
Sbjct: 127 RVPRMFPSVCTLDGKIYVMGGCDNLDSTNWMEVFDTKTQTWEFLQIP 173
>TAIR9_protein||AT4G39550.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18380681-18381859 REVERSE
Length = 393
Score = 80 bits (196), Expect = 3e-015
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Frame = +3
Query: 54 SAVEQKKKRRRVESP---SSSGLMSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASP 224
S+ E+K+K + SP S++ SLP D+V++ LARVSR Y LS+VSKS RSL+ASP
Sbjct: 2 SSPEKKRKTTKKPSPTPQSTTPNPSLPDDLVVSCLARVSRLYYPTLSLVSKSFRSLIASP 61
Query: 225 EMYETRSRMGLREECIYVCLGTSFGTKPLGWFIL 326
++Y+TRS +G E C+YVCL WF L
Sbjct: 62 DLYKTRSLLGRTESCLYVCLQEKDSDPNPRWFTL 95
>TAIR9_protein||AT5G49000.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type
beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein
match is: kelch repeat-containing F-box family protein
(TAIR:AT4G39550.1); Has 1294 Blast hits to 1195 proteins in 89 species:
Archae - 4; Bacteria - 28; Metazoa - 685; Fungi - 4; Plants - 527;
Viruses - 11; Other Eukaryotes - 35 (source: NCBI BLink). |
chr5:19864527-19865645 FORWARD
Length = 329
Score = 79 bits (193), Expect = 6e-015
Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Frame = +3
Query: 54 SAVEQKKKRRRVE-SPSSSGLMSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASPEM 230
S+ E+K+K+R +E SP S+ SLP D++++ LARVSR Y LS+VSKS R+LV SPE+
Sbjct: 2 SSPERKRKKRSLEPSPESTPNPSLPDDLIVSILARVSRLYYPILSLVSKSSRTLVTSPEL 61
Query: 231 YETRSRMGLREECIYVCLGTSFGTKPLGWFIL 326
Y+TRS E C+YVCL P WF L
Sbjct: 62 YKTRSFFNRTESCLYVCLDFPPDPNP-RWFTL 92
>TAIR9_protein||AT1G19930.1 | Symbols: | kelch repeat-containing F-box family
protein | chr1:6917020-6918138 FORWARD
Length = 345
Score = 79 bits (192), Expect = 8e-015
Identities = 41/83 (49%), Positives = 50/83 (60%)
Frame = +3
Query: 354 LIPIPIPSFPSPRRATYVSMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSQLPSMRFARC 533
L IPIP P R++ V++G IY IGG I +S VS LDC +HTW + PSM+ R
Sbjct: 100 LATIPIPHSPPLHRSSLVAVGSNIYNIGGSISQSQSSSVSILDCWSHTWLEGPSMQVERE 159
Query: 534 EAKAGVLDGKIYVMGGCDDVFSG 602
A +LDGKIYV GGC F G
Sbjct: 160 YPSASLLDGKIYVTGGCRLTFHG 182
Score = 75 bits (183), Expect = 9e-014
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +3
Query: 111 LMSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASPEMYETRSRMGLREECIYVCLGT 290
+ SLP D+++N LARVSR DY LS+VSK S++ PE+Y+TRS +GL E C+YVCL +
Sbjct: 11 IFSLPNDLLVNILARVSRLDYPILSLVSKRFSSVLTLPELYQTRSLVGLTENCLYVCLLS 70
Query: 291 SFGTKPLGWFIL 326
S + WF L
Sbjct: 71 SRADRIPSWFKL 82
>TAIR9_protein||AT4G39570.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18384254-18385441 REVERSE
Length = 396
Score = 78 bits (191), Expect = 1e-014
Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 4/102 (3%)
Frame = +3
Query: 21 KKHKRMMMSAASAVEQKKKRRRVESPSSSGLMSLPYDMVLNSLARVSRSDYGALSVVSKS 200
+K KR+ + +V++KKK V +P + SLP D++++ ARVSR Y LS+VSKS
Sbjct: 6 RKRKRVTSTKNPSVKKKKKISPVPTP----IPSLPDDLLVSIFARVSRLYYPILSLVSKS 61
Query: 201 IRSLVASPEMYETRSRMGLREECIYVCLGTSFGTKPLGWFIL 326
RSL+ SPE+YETRS +G E C+Y+CL WF L
Sbjct: 62 FRSLLRSPELYETRSLLGRTESCLYLCLQEGNPDPNPLWFTL 103
>TAIR9_protein||AT4G05620.1 | Symbols: | F-box family protein |
chr4:2985051-2985449 REVERSE
Length = 133
Score = 75 bits (182), Expect = 1e-013
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Frame = +3
Query: 114 MSLPYDMVLNSLARVSRSDYGALSVVSKSIRSLVASPEMYETRSRMGLREECIYVCLGTS 293
+SLP+D++++ LA VSR Y LS+V K+ RSL+ASPE+Y+TRS +G E C+YVCL
Sbjct: 21 LSLPHDVLVSCLAHVSRLHYSILSLVLKNFRSLIASPELYKTRSLLGRIESCLYVCLRFP 80
Query: 294 FGTKPLGWF--------ILRKGVQGNNRLIPIPIPSFPSPRRATYVSMGCGIY 428
+ P WF I+ N L+P P S +++G IY
Sbjct: 81 NESHP-RWFTLYMKPNQIVANNKSNCNLLVPTPTISSSPAHWLCLIAVGSRIY 132
>TAIR9_protein||AT4G19870.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:10783054-10784256 REVERSE
Length = 401
Score = 74 bits (181), Expect = 1e-013
Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Frame = +3
Query: 39 MMSAASAVEQKKKRRR-----VESPSSSGLMSLPYDMVLNSLARVSRSDYGALSVVSKSI 203
M A E+K KR S SS L SLP ++V N LAR+SRS Y LS+VSKS
Sbjct: 1 MKRQAKPPEKKTKRTTNASSPTPSSSSPSLSSLPDEIVENCLARISRSYYPTLSIVSKSF 60
Query: 204 RSLVASPEMYETRSRMGLREECIYVCLGTSFGTKPLGWFIL 326
RS+++S E+Y RS + EEC+YVCL P WF L
Sbjct: 61 RSIISSTELYVARSHLRNTEECVYVCLSDKSFEFP-KWFTL 100
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,194,490,410
Number of Sequences: 33410
Number of Extensions: 10194490410
Number of Successful Extensions: 338512619
Number of sequences better than 0.0: 0
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