BLASTX 7.6.2
Query= UN19618 /QuerySize=968
(967 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297821020|ref|XP_002878393.1| hypothetical protein ARALYDRAFT... 444 1e-122
gi|15233167|ref|NP_191721.1| exosome complex component RRP41 [Ar... 443 3e-122
gi|224130470|ref|XP_002320845.1| predicted protein [Populus tric... 380 2e-103
gi|255579328|ref|XP_002530509.1| Exosome complex exonuclease RRP... 377 1e-102
gi|225454436|ref|XP_002280302.1| PREDICTED: hypothetical protein... 376 3e-102
gi|242091341|ref|XP_002441503.1| hypothetical protein SORBIDRAFT... 359 6e-097
gi|212721602|ref|NP_001131612.1| RNase PH homolog [Zea mays] 358 8e-097
gi|195622232|gb|ACG32946.1| exosome complex exonuclease RRP41 [Z... 357 2e-096
gi|242088177|ref|XP_002439921.1| hypothetical protein SORBIDRAFT... 356 5e-096
gi|218201746|gb|EEC84173.1| hypothetical protein OsI_30553 [Oryz... 353 3e-095
gi|294464242|gb|ADE77635.1| unknown [Picea sitchensis] 351 1e-094
gi|302801728|ref|XP_002982620.1| hypothetical protein SELMODRAFT... 333 4e-089
gi|302798759|ref|XP_002981139.1| hypothetical protein SELMODRAFT... 322 5e-086
gi|168063069|ref|XP_001783497.1| predicted protein [Physcomitrel... 311 1e-082
gi|255644780|gb|ACU22892.1| unknown [Glycine max] 310 3e-082
gi|290989317|ref|XP_002677284.1| predicted protein [Naegleria gr... 298 1e-078
gi|159474468|ref|XP_001695347.1| 3'-5' exoribonuclease PH compon... 284 2e-074
gi|302829841|ref|XP_002946487.1| hypothetical protein VOLCADRAFT... 279 5e-073
gi|116754659|ref|YP_843777.1| exosome complex exonuclease Rrp41 ... 206 5e-051
>gi|297821020|ref|XP_002878393.1| hypothetical protein ARALYDRAFT_486650
[Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 444 bits (1141), Expect = 1e-122
Identities = 232/241 (96%), Positives = 236/241 (97%), Gaps = 2/241 (0%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ
Sbjct: 1 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 60
Query: 684 Q-KNGHALVLCEYSMAHFSTGDRRRQKNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
Q KN HA+VLCEYSMA FSTGDRRRQK DRRSTELSLVIRQTMEACILTEL+PHSQIDIF
Sbjct: 61 QKKNDHAVVLCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIF 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
LQVLQA GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD
Sbjct: 121 LQVLQADGGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 180
Query: 330 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRRA 151
VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAER+REVLQENTKQLEYRRA
Sbjct: 181 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERIREVLQENTKQLEYRRA 240
Query: 150 S 148
+
Sbjct: 241 A 241
>gi|15233167|ref|NP_191721.1| exosome complex component RRP41 [Arabidopsis
thaliana]
Length = 241
Score = 443 bits (1137), Expect = 3e-122
Identities = 231/241 (95%), Positives = 236/241 (97%), Gaps = 2/241 (0%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ
Sbjct: 1 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 60
Query: 684 Q-KNGHALVLCEYSMAHFSTGDRRRQKNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
Q KN HA+VLCEYSMA FSTGDRRRQK DRRSTELSLVIRQTMEACILTEL+PHSQIDIF
Sbjct: 61 QKKNDHAVVLCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIF 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
LQVLQA GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD
Sbjct: 121 LQVLQADGGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 180
Query: 330 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRRA 151
VTVGILPKLDKV+LLQMDAKLPMETFETVFALASEGCKAIAER+REVLQENTKQLEYRRA
Sbjct: 181 VTVGILPKLDKVSLLQMDAKLPMETFETVFALASEGCKAIAERIREVLQENTKQLEYRRA 240
Query: 150 S 148
+
Sbjct: 241 A 241
>gi|224130470|ref|XP_002320845.1| predicted protein [Populus trichocarpa]
Length = 241
Score = 380 bits (975), Expect = 2e-103
Identities = 197/239 (82%), Positives = 214/239 (89%), Gaps = 2/239 (0%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
ME+VNPEGLRLDGRR EMRQ+ A++G V+KADGSAVFEMGNTKVIAAVYGPRE+QN+SQ
Sbjct: 1 MEFVNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60
Query: 684 QKNGHALVLCEYSMAHFSTGDRRRQ-KNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
Q N ALV CEYSMA+FSTGDRRR+ K DRRSTE+SLVIRQ ME CILT L+P SQIDI+
Sbjct: 61 QINDQALVRCEYSMANFSTGDRRRKPKGDRRSTEISLVIRQAMEECILTNLMPRSQIDIY 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
+QVLQA GGTRSACINAATLALADAGIPMRDL SCSAG+LNSTPLLDLNYVEDSAGG D
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGFLNSTPLLDLNYVEDSAGGPD 180
Query: 330 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRR 154
VTVGILPKLDKVTLLQMDAKLP++TFE V LA EGCKAIA +REVL ENTKQLEYRR
Sbjct: 181 VTVGILPKLDKVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREVLLENTKQLEYRR 239
>gi|255579328|ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative
[Ricinus communis]
Length = 241
Score = 377 bits (968), Expect = 1e-102
Identities = 196/239 (82%), Positives = 213/239 (89%), Gaps = 2/239 (0%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
MEYV+PEGLRLDGRR EMRQ+ A++G VSKADGSAVFEMGNTKVIAAVYGPRE+QN+SQ
Sbjct: 1 MEYVSPEGLRLDGRRPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60
Query: 684 QKNGHALVLCEYSMAHFSTGDR-RRQKNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
Q ALV CEY+MA+FSTGDR R+ K DRRSTE+SLVIRQTME CILT L+P SQIDI+
Sbjct: 61 QIIDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIY 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
+QVLQA GGTRSACINAATLALADAGIPMRDL SCSAGYLNSTPLLDLNYVEDSAGG D
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180
Query: 330 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRR 154
VTVGILPKLDKVTLLQMDAKLP++TFE V LA EGCKAIA +RE+L ENTKQLEYRR
Sbjct: 181 VTVGILPKLDKVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREILLENTKQLEYRR 239
>gi|225454436|ref|XP_002280302.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 241
Score = 376 bits (965), Expect = 3e-102
Identities = 196/239 (82%), Positives = 212/239 (88%), Gaps = 2/239 (0%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
ME+V+PEGLRLDGRR EMRQI E+G V+KADGSA FEMGNTKVIAAVYGPRE++N+SQ
Sbjct: 1 MEFVSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVENRSQ 60
Query: 684 QKNGHALVLCEYSMAHFSTGDR-RRQKNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
Q + ALV CEY+MA+FSTGDR R+ K DRRSTE+SLVIRQTMEACILT L+P SQIDIF
Sbjct: 61 QISDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
+QVLQA GGTRSACINAATLALADAGIPMRDL SCSAGYLNSTPLLDLNYVEDSAGG D
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180
Query: 330 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRR 154
VTVGILPKLDKVTLLQMDAKLPM+ FE V LA EGCKAIA +REVL ENTKQLEYRR
Sbjct: 181 VTVGILPKLDKVTLLQMDAKLPMDIFENVMQLAIEGCKAIANYIREVLLENTKQLEYRR 239
>gi|242091341|ref|XP_002441503.1| hypothetical protein SORBIDRAFT_09g028170
[Sorghum bicolor]
Length = 242
Score = 359 bits (919), Expect = 6e-097
Identities = 189/241 (78%), Positives = 211/241 (87%), Gaps = 4/241 (1%)
Frame = -2
Query: 864 MEYVNP-EGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKS 688
MEYVNP G R+DGRR NEMRQ+ EVG+V++ADGSA+FEMGNT+VIAAVYGPRE+QNK
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGIVARADGSALFEMGNTRVIAAVYGPREVQNKG 60
Query: 687 QQKNGH-ALVLCEYSMAHFSTGDRRRQ-KNDRRSTELSLVIRQTMEACILTELLPHSQID 514
QQ N + ALV CEY MA FSTGDRRR+ K DRRSTE+SLVIRQTMEA ILT L+PHSQID
Sbjct: 61 QQVNSNEALVRCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQID 120
Query: 513 IFLQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGG 337
I++QVLQA GGTRSACINAATLALADAGIPMRD+ SCSAGYL STPLLDLNY+EDSAGG
Sbjct: 121 IYVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLDLNYLEDSAGG 180
Query: 336 ADVTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYR 157
+DVTVGIL K+DKVTLLQMDAKLPM+TFE V LA EGCKAIA +REVL ENTK+LE +
Sbjct: 181 SDVTVGILAKMDKVTLLQMDAKLPMDTFENVMGLAIEGCKAIASYIREVLLENTKKLECQ 240
Query: 156 R 154
R
Sbjct: 241 R 241
>gi|212721602|ref|NP_001131612.1| RNase PH homolog [Zea mays]
Length = 242
Score = 358 bits (918), Expect = 8e-097
Identities = 190/241 (78%), Positives = 211/241 (87%), Gaps = 4/241 (1%)
Frame = -2
Query: 864 MEYVNP-EGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKS 688
MEYVNP G R+DGRR NEMRQ+ EVGVV++ADGSA+FEMGNT+VIAAVYGPRE+QNK
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60
Query: 687 QQKNG-HALVLCEYSMAHFSTGDRRRQ-KNDRRSTELSLVIRQTMEACILTELLPHSQID 514
QQ N ALV CEY MA FSTGDRRR+ K DRRSTE+SLVIRQTMEA ILT L+PHSQID
Sbjct: 61 QQVNSKEALVRCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQID 120
Query: 513 IFLQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGG 337
I++QVLQA GGTRSACINAATLALADAGIPMRD+A SCSAGYL STPLLDLNY+EDSAGG
Sbjct: 121 IYVQVLQADGGTRSACINAATLALADAGIPMRDIATSCSAGYLCSTPLLDLNYLEDSAGG 180
Query: 336 ADVTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYR 157
+DVTVGIL K+DKVTLLQMDAKLP++TFE V LA EGCKAIA +REVL ENTK+LE +
Sbjct: 181 SDVTVGILAKMDKVTLLQMDAKLPIDTFENVMGLAIEGCKAIATYIREVLLENTKKLECQ 240
Query: 156 R 154
R
Sbjct: 241 R 241
>gi|195622232|gb|ACG32946.1| exosome complex exonuclease RRP41 [Zea mays]
Length = 242
Score = 357 bits (915), Expect = 2e-096
Identities = 190/241 (78%), Positives = 210/241 (87%), Gaps = 4/241 (1%)
Frame = -2
Query: 864 MEYVNP-EGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKS 688
MEYVNP G R+DGRR NEMRQ+ EVGVV +ADGSA+FEMGNT+VIAAVYGPRE+QNK
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVVRADGSALFEMGNTRVIAAVYGPREVQNKG 60
Query: 687 QQKNG-HALVLCEYSMAHFSTGDRRRQ-KNDRRSTELSLVIRQTMEACILTELLPHSQID 514
QQ N ALV CEY MA FSTGDRRR+ K DRRSTE+SLVIRQTMEA ILT L+PHSQID
Sbjct: 61 QQVNSKEALVRCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQID 120
Query: 513 IFLQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGG 337
I++QVLQA GGTRSACINAATLALADAGIPMRD+A SCSAGYL STPLLDLNY+EDSAGG
Sbjct: 121 IYVQVLQADGGTRSACINAATLALADAGIPMRDIATSCSAGYLCSTPLLDLNYLEDSAGG 180
Query: 336 ADVTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYR 157
+DVTVGIL K+DKVTLLQMDAKLP++TFE V LA EGCKAIA +REVL ENTK+LE +
Sbjct: 181 SDVTVGILAKMDKVTLLQMDAKLPIDTFENVMGLAIEGCKAIATYIREVLLENTKKLECQ 240
Query: 156 R 154
R
Sbjct: 241 R 241
>gi|242088177|ref|XP_002439921.1| hypothetical protein SORBIDRAFT_09g022550
[Sorghum bicolor]
Length = 242
Score = 356 bits (911), Expect = 5e-096
Identities = 189/241 (78%), Positives = 210/241 (87%), Gaps = 4/241 (1%)
Frame = -2
Query: 864 MEYVNP-EGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKS 688
MEYVNP G R+DGRR NEMRQ+ EVGVV++ADGSA+FEMGNT+VIAAVYGPRE+QNK
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60
Query: 687 QQKNGH-ALVLCEYSMAHFSTGDRRRQ-KNDRRSTELSLVIRQTMEACILTELLPHSQID 514
QQ N + ALV CEY MA FSTGDRRR+ K DRRSTE+SLVIRQTMEA ILT L+P SQID
Sbjct: 61 QQVNSNEALVRCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPRSQID 120
Query: 513 IFLQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGG 337
I++QVLQA GGTRSACINAATLALADAGIPMRD+ SCSAGYL STPLLDLNY+EDSAGG
Sbjct: 121 IYVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLDLNYLEDSAGG 180
Query: 336 ADVTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYR 157
+DVTVGIL K+DKVTLLQMDAKLPM+TFE V LA EGCKAIA +REVL ENTK+LE +
Sbjct: 181 SDVTVGILAKMDKVTLLQMDAKLPMDTFENVMGLAIEGCKAIATYIREVLLENTKKLECQ 240
Query: 156 R 154
R
Sbjct: 241 R 241
>gi|218201746|gb|EEC84173.1| hypothetical protein OsI_30553 [Oryza sativa Indica
Group]
Length = 242
Score = 353 bits (905), Expect = 3e-095
Identities = 188/241 (78%), Positives = 208/241 (86%), Gaps = 4/241 (1%)
Frame = -2
Query: 864 MEYVNP-EGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKS 688
MEYVNP G R+DGRR NEMRQ+ EVGVV++ADGSA+FEMGNT+VIAAVYGPRE+QNK
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60
Query: 687 QQKNG-HALVLCEYSMAHFSTGDRRRQ-KNDRRSTELSLVIRQTMEACILTELLPHSQID 514
QQ N ALV CEY MA FSTGDRRR+ K DRRSTE+SLVIRQTMEA ILT L+P SQID
Sbjct: 61 QQVNSKDALVRCEYRMADFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPRSQID 120
Query: 513 IFLQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGG 337
IF+QVLQA GGTR+ACINAATLALADAGIPMRD+ SCSAGYL STPLLDLNY+EDSAGG
Sbjct: 121 IFVQVLQADGGTRAACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGG 180
Query: 336 ADVTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYR 157
DVTVG L K+DKVTLLQMDAKLPM+TFETV LA EGCKAIA +REVL ENT++LE +
Sbjct: 181 PDVTVGFLTKMDKVTLLQMDAKLPMDTFETVMDLAIEGCKAIANYIREVLLENTRRLECQ 240
Query: 156 R 154
R
Sbjct: 241 R 241
>gi|294464242|gb|ADE77635.1| unknown [Picea sitchensis]
Length = 243
Score = 351 bits (900), Expect = 1e-094
Identities = 179/239 (74%), Positives = 208/239 (87%), Gaps = 2/239 (0%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
MEY++PEGLRLDGRR EMRQ+ A++GVV KADGSA+FEMGNTKVIAAVYGP E+QNK+Q
Sbjct: 1 MEYISPEGLRLDGRRPLEMRQLHAQLGVVDKADGSAIFEMGNTKVIAAVYGPHEVQNKNQ 60
Query: 684 QKNGHALVLCEYSMAHFSTGDR-RRQKNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
Q ALV CEYSMA+FSTGDR RR K DRR+TE+SLVIRQTMEA ILT L+P +QIDIF
Sbjct: 61 QLPDQALVRCEYSMANFSTGDRPRRSKGDRRATEISLVIRQTMEATILTHLMPRTQIDIF 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
+QVLQA GGTRSACINAATLALADAGIPM DL SC+AGYLNSTPLLD+NY+EDSAGG D
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMCDLVTSCAAGYLNSTPLLDMNYMEDSAGGPD 180
Query: 330 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRR 154
V VG++ K+DK++LLQMD+KLPM+ FETV LA EGCKAI +++VL ENTKQLEY++
Sbjct: 181 VAVGLMTKMDKLSLLQMDSKLPMDIFETVMQLAIEGCKAIVRYIQDVLLENTKQLEYQK 239
>gi|302801728|ref|XP_002982620.1| hypothetical protein SELMODRAFT_155148
[Selaginella moellendorffii]
Length = 242
Score = 333 bits (852), Expect = 4e-089
Identities = 174/235 (74%), Positives = 198/235 (84%), Gaps = 2/235 (0%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
ME+V PEGLRLDGRR EMRQ+ AE+GVV A+GSA+FEMGNTKVIAAVYGP E+ N+SQ
Sbjct: 1 MEFVGPEGLRLDGRRPLEMRQLHAELGVVENANGSAMFEMGNTKVIAAVYGPHEVHNRSQ 60
Query: 684 QKNGHALVLCEYSMAHFSTGDRRRQ-KNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
Q ALV CEYSMA FSTGDRRR+ K +RRSTE+SLVIRQT+EA ILT L+P SQIDI+
Sbjct: 61 QLWDRALVRCEYSMAAFSTGDRRRKGKGNRRSTEISLVIRQTLEAAILTNLMPKSQIDIY 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
+QVLQA GGTRSACINAA LALA+AGIPMRDL SC+AGYLN TPLLDLNYVEDS GG D
Sbjct: 121 VQVLQADGGTRSACINAAALALAEAGIPMRDLVASCAAGYLNGTPLLDLNYVEDSGGGPD 180
Query: 330 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQL 166
VTV + PK+DKV+LLQMD+KLP+E FE VF LA+EG KA A +REVL ENT+ L
Sbjct: 181 VTVALFPKVDKVSLLQMDSKLPLEHFENVFQLAAEGAKAAARYMREVLMENTQNL 235
>gi|302798759|ref|XP_002981139.1| hypothetical protein SELMODRAFT_233636
[Selaginella moellendorffii]
Length = 264
Score = 322 bits (825), Expect = 5e-086
Identities = 168/227 (74%), Positives = 192/227 (84%), Gaps = 2/227 (0%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
ME+V PEGLRLDGRR EMRQ+ AE+GVV A+GSA+FEMGNTKVIAAVYGP E+ N+SQ
Sbjct: 1 MEFVGPEGLRLDGRRPLEMRQLHAELGVVENANGSAMFEMGNTKVIAAVYGPHEVHNRSQ 60
Query: 684 QKNGHALVLCEYSMAHFSTGDRRRQ-KNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
Q ALV CEYSMA FSTGDRRR+ K +RRSTE+SLVIRQT+EA ILT L+P SQIDI+
Sbjct: 61 QLWDRALVRCEYSMAAFSTGDRRRKGKGNRRSTEISLVIRQTLEAAILTNLMPKSQIDIY 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
+QVLQA GGTRSACINAA LALA+AGIPMRDL SC+AGYLN TPLLDLNYVEDS GG D
Sbjct: 121 VQVLQADGGTRSACINAAALALAEAGIPMRDLVASCAAGYLNGTPLLDLNYVEDSGGGPD 180
Query: 330 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREV 190
VTV + PK+DKV+LLQMD+K+P+E FE VF LA+EG KA A +REV
Sbjct: 181 VTVALFPKVDKVSLLQMDSKMPLEHFENVFQLAAEGAKAAARYMREV 227
>gi|168063069|ref|XP_001783497.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 246
Score = 311 bits (796), Expect = 1e-082
Identities = 163/238 (68%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Frame = -2
Query: 861 EYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQ 682
E+V+PEGLRLDGRR EMR + A VGVV ADGSA+F MGNT+V+A VYGP E+ NK+ Q
Sbjct: 4 EFVSPEGLRLDGRRPPEMRHLHAVVGVVPSADGSALFHMGNTQVMAVVYGPHEVHNKAHQ 63
Query: 681 KNGHALVLCEYSMAHFSTGDRRRQ-KNDRRSTELSLVIRQTMEACILTELLPHSQIDIFL 505
+ ALV CEYSMA FSTG+RRR+ K DRR+TELSLVI QT+EA I+T LLP SQIDI++
Sbjct: 64 LHDKALVRCEYSMAAFSTGERRRRGKTDRRATELSLVIGQTLEAAIMTHLLPRSQIDIYV 123
Query: 504 QVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGADV 328
QVLQA GGTR+ACINAA++ALADAGIPMRDL VSC+AGYLNSTPLLDLNY EDS GG D+
Sbjct: 124 QVLQADGGTRAACINAASMALADAGIPMRDLVVSCAAGYLNSTPLLDLNYQEDSGGGPDL 183
Query: 327 TVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRR 154
VG PKL+K++LLQMD+K+ +ETFE V LA+EG KA+A RE L ENT+ L R
Sbjct: 184 VVGYFPKLEKLSLLQMDSKVSIETFEKVLELATEGAKAVATFTREKLLENTRTLASAR 241
>gi|255644780|gb|ACU22892.1| unknown [Glycine max]
Length = 190
Score = 310 bits (792), Expect = 3e-082
Identities = 160/189 (84%), Positives = 173/189 (91%), Gaps = 2/189 (1%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
MEYV+PEGLRLDGRR EMRQI AE+G VSKADGSA+FEMGNTKVIAAVYGPRE+QN++Q
Sbjct: 1 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQ 60
Query: 684 QKNGHALVLCEYSMAHFSTGDR-RRQKNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
Q + HALV CEYSMA+FSTGDR R+ K DRRSTE+SLVIRQTMEACILT LLP SQIDI+
Sbjct: 61 QISSHALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIY 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
+QVLQA GGTRSACINAATLALADAGIPMRDL SCSAGYLNSTPLLDLNYVEDSAGG D
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180
Query: 330 VTVGILPKL 304
VT+GILPKL
Sbjct: 181 VTLGILPKL 189
>gi|290989317|ref|XP_002677284.1| predicted protein [Naegleria gruberi]
Length = 248
Score = 298 bits (761), Expect = 1e-078
Identities = 150/240 (62%), Positives = 191/240 (79%), Gaps = 2/240 (0%)
Frame = -2
Query: 867 RMEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKS 688
R+EY++PEGLR+DGRR +E+R I ++ + S+ADGSA +E GNT+V+AAVYGPRE++NKS
Sbjct: 4 RIEYISPEGLRVDGRRSHEIRNIKFKLNLFSRADGSAYYEQGNTRVLAAVYGPREVKNKS 63
Query: 687 QQKNGHALVLCEYSMAHFSTGDRRRQ-KNDRRSTELSLVIRQTMEACILTELLPHSQIDI 511
Q KN A++ CEYSMA FSTG+R+RQ K DRRSTE+S+VIRQT E+ ILT L P +QIDI
Sbjct: 64 QMKNDRAIINCEYSMATFSTGERKRQFKKDRRSTEISVVIRQTFESVILTHLYPRTQIDI 123
Query: 510 FLQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGA 334
F+QVLQA GGTR ACINAATLAL DAGIPM+D VSC+AG++ +PL DLNY+ED AGG
Sbjct: 124 FMQVLQADGGTRCACINAATLALLDAGIPMKDFVVSCAAGFIQGSPLTDLNYIEDCAGGP 183
Query: 333 DVTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRR 154
DV + +LPK DKVTLLQMD+KL ++ FE V A EGCK I + + E L+++T L +R
Sbjct: 184 DVPIALLPKHDKVTLLQMDSKLSLDQFEKVLEHAIEGCKQIHKVIDEQLKKHTYALVNKR 243
>gi|159474468|ref|XP_001695347.1| 3'-5' exoribonuclease PH component of the
exosome [Chlamydomonas reinhardtii]
Length = 245
Score = 284 bits (725), Expect = 2e-074
Identities = 143/239 (59%), Positives = 186/239 (77%), Gaps = 2/239 (0%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
ME+V+PEGLRLDGRR E+R+I ++ V+S ADGSA+FEMGNTKV+AAV+GP + +S+
Sbjct: 1 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 60
Query: 684 QKNGHALVLCEYSMAHFSTGDRRRQ-KNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
+ ALV+CEYSMA FSTG+RRR+ K DRRSTELS+VIR T+E ++TELLP SQID++
Sbjct: 61 LREEGALVVCEYSMAAFSTGERRRRGKGDRRSTELSMVIRNTLEQAVITELLPRSQIDVY 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
+QVLQA GGTR A INAA LALA AG+P+RDL C+AGYL+ T LLDLNY EDS GG D
Sbjct: 121 VQVLQADGGTRCAAINAAVLALAAAGVPLRDLVAGCAAGYLDGTALLDLNYTEDSGGGPD 180
Query: 330 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRR 154
+ V + P+LD + L+QMD +LP++TF+ V LA EGC+ I+ +R L E+T++L R
Sbjct: 181 LCVALAPRLDSLYLVQMDNRLPVDTFQAVMELAREGCRTISGVMRAALLEHTQRLAVAR 239
>gi|302829841|ref|XP_002946487.1| hypothetical protein VOLCADRAFT_108889 [Volvox
carteri f. nagariensis]
Length = 245
Score = 279 bits (713), Expect = 5e-073
Identities = 141/239 (58%), Positives = 184/239 (76%), Gaps = 2/239 (0%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
MEYV+PEGLRLDGRR E+R+I ++ V+S ADGSA+FEMGNTKV+AAV+GP + ++
Sbjct: 1 MEYVSPEGLRLDGRRPRELRRINCQLDVLSSADGSAIFEMGNTKVLAAVFGPHAVTKRAD 60
Query: 684 QKNGHALVLCEYSMAHFSTGDRRRQ-KNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
+ A+V+CEYSMA FSTG+RRR+ K DRRSTELS+VIR T+E IL EL+P SQID++
Sbjct: 61 LREDAAIVVCEYSMAAFSTGERRRRGKGDRRSTELSMVIRNTLEQAILRELMPRSQIDVY 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
+QVLQA GGTR A INAA LALA AG+P+RDL SC+AGYL+ TPLLDLN+ EDS GG D
Sbjct: 121 VQVLQADGGTRCAAINAAVLALAAAGVPLRDLVASCAAGYLDGTPLLDLNFTEDSGGGPD 180
Query: 330 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRR 154
+ V + P+ + L+QMD +LP++TF+ V LA +GC+ I+ +R L E+TK+L R
Sbjct: 181 LAVALAPREGLLVLVQMDNRLPVDTFQAVLDLARDGCRTISGVMRAALLEHTKRLAVAR 239
>gi|116754659|ref|YP_843777.1| exosome complex exonuclease Rrp41 [Methanosaeta
thermophila PT]
Length = 245
Score = 206 bits (523), Expect = 5e-051
Identities = 117/229 (51%), Positives = 151/229 (65%), Gaps = 2/229 (0%)
Frame = -2
Query: 846 EGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKNGHA 667
+G+RLDGRRF+E+R I EVGV+ +ADGS EMG+ KVIAAVYGPRE+ + Q+ A
Sbjct: 9 DGIRLDGRRFDELRPIKMEVGVLKRADGSCYMEMGDNKVIAAVYGPREVHPRHLQEVNRA 68
Query: 666 LVLCEYSMAHFSTGDRRRQKNDRRSTELSLVIRQTMEACILTELLPHSQIDIFLQVLQA- 490
++ Y+MA FS +RRR DRRS ELS V R+ +E ILT P S IDIF++VLQA
Sbjct: 69 IIRYRYNMASFSVEERRRPGPDRRSYELSKVSREALEPVILTSYFPKSVIDIFVEVLQAD 128
Query: 489 GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGADVTVGILP 310
GTR+A INAA++ALADAGIPMR L SC+AG ++ +LD ED+ G AD+ + I P
Sbjct: 129 AGTRTAGINAASVALADAGIPMRSLVSSCAAGKVDGQIVLDPMKDEDNFGQADMPIAITP 188
Query: 309 KLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLE 163
++TLLQMD L + F LA +GC+ I + R VL E Q E
Sbjct: 189 -TGEITLLQMDGILTRDEFRQAMELAKKGCQEIYKIQRRVLIERYSQFE 236
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,354,205,064,082
Number of Sequences: 15229318
Number of Extensions: 2354205064082
Number of Successful Extensions: 584002404
Number of sequences better than 0.0: 0
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