BLASTX 7.6.2
Query= UN19618 /QuerySize=968
(967 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G61620.1 | Symbols: RRP41 | RRP41; 3'-5'-exori... 443 1e-124
TAIR9_protein||AT3G61620.2 | Symbols: RRP41 | RRP41; 3'-5'-exori... 443 1e-124
TAIR9_protein||AT4G27490.1 | Symbols: | 3' exoribonuclease fami... 102 3e-022
TAIR9_protein||AT3G46210.1 | Symbols: | 3' exoribonuclease fami... 49 6e-006
TAIR9_protein||AT3G46210.2 | Symbols: | 3' exoribonuclease fami... 49 6e-006
TAIR9_protein||AT3G46210.3 | Symbols: | 3' exoribonuclease fami... 49 6e-006
TAIR9_protein||AT3G46210.4 | Symbols: | 3' exoribonuclease fami... 49 6e-006
TAIR9_protein||AT3G46210.5 | Symbols: | 3' exoribonuclease fami... 49 6e-006
>TAIR9_protein||AT3G61620.1 | Symbols: RRP41 | RRP41; 3'-5'-exoribonuclease/ RNA
binding | chr3:22801382-22802910 REVERSE
Length = 242
Score = 443 bits (1138), Expect = 1e-124
Identities = 231/242 (95%), Positives = 236/242 (97%), Gaps = 2/242 (0%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ
Sbjct: 1 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 60
Query: 684 Q-KNGHALVLCEYSMAHFSTGDRRRQKNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
Q KN HA+VLCEYSMA FSTGDRRRQK DRRSTELSLVIRQTMEACILTEL+PHSQIDIF
Sbjct: 61 QKKNDHAVVLCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIF 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
LQVLQA GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD
Sbjct: 121 LQVLQADGGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 180
Query: 330 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRRA 151
VTVGILPKLDKV+LLQMDAKLPMETFETVFALASEGCKAIAER+REVLQENTKQLEYRRA
Sbjct: 181 VTVGILPKLDKVSLLQMDAKLPMETFETVFALASEGCKAIAERIREVLQENTKQLEYRRA 240
Query: 150 S* 145
+*
Sbjct: 241 A* 242
>TAIR9_protein||AT3G61620.2 | Symbols: RRP41 | RRP41; 3'-5'-exoribonuclease/ RNA
binding | chr3:22801382-22802910 REVERSE
Length = 242
Score = 443 bits (1138), Expect = 1e-124
Identities = 231/242 (95%), Positives = 236/242 (97%), Gaps = 2/242 (0%)
Frame = -2
Query: 864 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 685
MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ
Sbjct: 1 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 60
Query: 684 Q-KNGHALVLCEYSMAHFSTGDRRRQKNDRRSTELSLVIRQTMEACILTELLPHSQIDIF 508
Q KN HA+VLCEYSMA FSTGDRRRQK DRRSTELSLVIRQTMEACILTEL+PHSQIDIF
Sbjct: 61 QKKNDHAVVLCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIF 120
Query: 507 LQVLQA-GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 331
LQVLQA GGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD
Sbjct: 121 LQVLQADGGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGAD 180
Query: 330 VTVGILPKLDKVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQENTKQLEYRRA 151
VTVGILPKLDKV+LLQMDAKLPMETFETVFALASEGCKAIAER+REVLQENTKQLEYRRA
Sbjct: 181 VTVGILPKLDKVSLLQMDAKLPMETFETVFALASEGCKAIAERIREVLQENTKQLEYRRA 240
Query: 150 S* 145
+*
Sbjct: 241 A* 242
>TAIR9_protein||AT4G27490.1 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr4:13739961-13741647 FORWARD
Length = 257
Score = 102 bits (254), Expect = 3e-022
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 5/221 (2%)
Frame = -2
Query: 837 RLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKNGHALVL 658
R DGR F++ R + + G VS A GSA E GNTKVI +V+GPRE K+ + +
Sbjct: 34 RPDGRGFHQCRPALLQTGAVSSASGSAYAEFGNTKVIVSVFGPRE-SKKAMVYSDVGRLN 92
Query: 657 CEYSMAHFSTGDRRRQKNDRRSTELSLVIRQTMEACILTELLPHSQIDIFLQVLQAGGT- 481
C S +F++ Q D + E S ++ + +E I+ E P + +D+F VL++GG+
Sbjct: 93 CNVSYTNFAS-PTLGQGTDHK--EYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSD 149
Query: 480 RSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGADVTVGILPKLD 301
S I+ A+LALADAGI M DL + S + + ++D E+ + +P
Sbjct: 150 LSVLISCASLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRY 209
Query: 300 KVTLLQMDAKLPMETFETVFALASEGCKAIAERVREVLQEN 178
++T L + + L + + E +R+ L+++
Sbjct: 210 EITQLTITGEWTTPNINEAMQLCLDASSKLGEIMRDCLKQS 250
>TAIR9_protein||AT3G46210.1 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 49 bits (114), Expect = 6e-006
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = -2
Query: 588 ELSLVIRQTMEACILTELLPHSQIDIFLQVLQAGGTRSAC-INAATLALADAGIPMRDLA 412
E +++++T+++ + + P++ + +QV+ G+ C INAA AL DAGIPM+ LA
Sbjct: 79 EYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLA 138
Query: 411 VS-CSAGYLNSTPLLDLNYVED 349
V+ C N +LD N +E+
Sbjct: 139 VAICCCLAENGYLVLDPNKLEE 160
>TAIR9_protein||AT3G46210.2 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 49 bits (114), Expect = 6e-006
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = -2
Query: 588 ELSLVIRQTMEACILTELLPHSQIDIFLQVLQAGGTRSAC-INAATLALADAGIPMRDLA 412
E +++++T+++ + + P++ + +QV+ G+ C INAA AL DAGIPM+ LA
Sbjct: 79 EYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLA 138
Query: 411 VS-CSAGYLNSTPLLDLNYVED 349
V+ C N +LD N +E+
Sbjct: 139 VAICCCLAENGYLVLDPNKLEE 160
>TAIR9_protein||AT3G46210.3 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 49 bits (114), Expect = 6e-006
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = -2
Query: 588 ELSLVIRQTMEACILTELLPHSQIDIFLQVLQAGGTRSAC-INAATLALADAGIPMRDLA 412
E +++++T+++ + + P++ + +QV+ G+ C INAA AL DAGIPM+ LA
Sbjct: 79 EYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLA 138
Query: 411 VS-CSAGYLNSTPLLDLNYVED 349
V+ C N +LD N +E+
Sbjct: 139 VAICCCLAENGYLVLDPNKLEE 160
>TAIR9_protein||AT3G46210.4 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 49 bits (114), Expect = 6e-006
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = -2
Query: 588 ELSLVIRQTMEACILTELLPHSQIDIFLQVLQAGGTRSAC-INAATLALADAGIPMRDLA 412
E +++++T+++ + + P++ + +QV+ G+ C INAA AL DAGIPM+ LA
Sbjct: 79 EYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLA 138
Query: 411 VS-CSAGYLNSTPLLDLNYVED 349
V+ C N +LD N +E+
Sbjct: 139 VAICCCLAENGYLVLDPNKLEE 160
>TAIR9_protein||AT3G46210.5 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 49 bits (114), Expect = 6e-006
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = -2
Query: 588 ELSLVIRQTMEACILTELLPHSQIDIFLQVLQAGGTRSAC-INAATLALADAGIPMRDLA 412
E +++++T+++ + + P++ + +QV+ G+ C INAA AL DAGIPM+ LA
Sbjct: 79 EYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLA 138
Query: 411 VS-CSAGYLNSTPLLDLNYVED 349
V+ C N +LD N +E+
Sbjct: 139 VAICCCLAENGYLVLDPNKLEE 160
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,194,490,410
Number of Sequences: 33410
Number of Extensions: 10194490410
Number of Successful Extensions: 338512619
Number of sequences better than 0.0: 0
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