BLASTX 7.6.2
Query= UN19626 /QuerySize=755
(754 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G01740.1 | Symbols: | FUNCTIONS IN: molecular... 219 2e-057
TAIR9_protein||AT5G14290.1 | Symbols: | FUNCTIONS IN: molecular... 175 3e-044
>TAIR9_protein||AT3G01740.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Ribosomal protein L37, mitochondrial (InterPro:IPR013870);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G14290.1); Has 117 Blast hits to 117 proteins in 58 species:
Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 22; Plants - 27;
Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). |
chr3:268118-268498 FORWARD
Length = 127
Score = 219 bits (556), Expect = 2e-057
Identities = 114/125 (91%), Positives = 115/125 (92%), Gaps = 2/125 (1%)
Frame = +3
Query: 90 RIGLITG-GSKDVVRRTFAAAAGKAKKGGKGGG-SDAPKGSSLSKEIKSTTVVGANTLKD 263
RIGLI G SKDVVRRTFAAAA KAKKGGKGGG SDAPKGSSL+KEIKSTTVVGANTLKD
Sbjct: 3 RIGLIRGSSSKDVVRRTFAAAASKAKKGGKGGGASDAPKGSSLTKEIKSTTVVGANTLKD 62
Query: 264 GSDPKILPDSDYPDWLWRLLHIRPALSELRRKNVETLPYDDLKRFVKLDTRSKIKENNSI 443
GSDPKILPDSDYPDWLW LL RPALSELRRKNVETLPYDDLKRFVKLDTR KIKENNSI
Sbjct: 63 GSDPKILPDSDYPDWLWHLLDKRPALSELRRKNVETLPYDDLKRFVKLDTRGKIKENNSI 122
Query: 444 KAKN* 458
KAKN*
Sbjct: 123 KAKN* 127
>TAIR9_protein||AT5G14290.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ribosomal
protein L37, mitochondrial (InterPro:IPR013870); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT3G01740.1); Has 31
Blast hits to 31 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:4612212-4612610 REVERSE
Length = 133
Score = 175 bits (443), Expect = 3e-044
Identities = 92/120 (76%), Positives = 104/120 (86%), Gaps = 5/120 (4%)
Frame = +3
Query: 114 SKDVVR----RTFAAAAGKAKKGGKG-GGSDAPKGSSLSKEIKSTTVVGANTLKDGSDPK 278
SKDV+R RTFA AAGKAKK G+G GG+DAPK S+LSKEIKS+ VV ANTLKDG DPK
Sbjct: 14 SKDVMRFVCQRTFATAAGKAKKVGRGDGGNDAPKASNLSKEIKSSMVVSANTLKDGLDPK 73
Query: 279 ILPDSDYPDWLWRLLHIRPALSELRRKNVETLPYDDLKRFVKLDTRSKIKENNSIKAKN* 458
ILP+SD+PD+LW LL RPALSELRRKNVETL +DDLKRFVKLDTR++IKEN+SIKAKN*
Sbjct: 74 ILPNSDHPDYLWHLLDKRPALSELRRKNVETLSFDDLKRFVKLDTRARIKENHSIKAKN* 133
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,194,490,410
Number of Sequences: 33410
Number of Extensions: 10194490410
Number of Successful Extensions: 338512619
Number of sequences better than 0.0: 0
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