BLASTX 7.6.2
Query= UN19627 /QuerySize=714
(713 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G68660.1 | Symbols: | FUNCTIONS IN: molecular... 290 7e-079
TAIR9_protein||AT1G68660.2 | Symbols: | FUNCTIONS IN: molecular... 177 9e-045
>TAIR9_protein||AT1G68660.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: protein catabolic process; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Adaptor protein ClpS, core (InterPro:IPR003769), Ribosomal
protein L7/L12, C-terminal/adaptor protein ClpS-like
(InterPro:IPR014719); Has 513 Blast hits to 513 proteins in 129
species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 0; Plants -
39; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). |
chr1:25778058-25779083 REVERSE
Length = 160
Score = 290 bits (741), Expect = 7e-079
Identities = 148/161 (91%), Positives = 151/161 (93%), Gaps = 4/161 (2%)
Frame = -1
Query: 632 MESVICGRLALAPSSLFNSKSGDKHSVSKGPWVNNRGVLMTKS---ALGKGGGVLDKPII 462
ME+ ICGRLALAPSSLFNSKSGDKH VSKGP V NR +LMT S ALGKGGGVLDKPII
Sbjct: 1 METAICGRLALAPSSLFNSKSGDKHLVSKGPCV-NRSILMTLSTSAALGKGGGVLDKPII 59
Query: 461 EKTTPGRESEFDLRKSKKMAPPYRVILHNDNFNKREYVVQVLMKVIPGMTVDNAVNIMQE 282
EKTTPGRESEFDLRKSKK+APPYRVILHNDNFNKREYVVQVLMKVIPGMTVDNAVNIMQE
Sbjct: 60 EKTTPGRESEFDLRKSKKIAPPYRVILHNDNFNKREYVVQVLMKVIPGMTVDNAVNIMQE 119
Query: 281 AHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC* 159
AHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC*
Sbjct: 120 AHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC* 160
>TAIR9_protein||AT1G68660.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: protein catabolic process; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Adaptor protein ClpS, core (InterPro:IPR003769), Ribosomal
protein L7/L12, C-terminal/adaptor protein ClpS-like
(InterPro:IPR014719); Has 79 Blast hits to 79 proteins in 34 species:
Archae - 0; Bacteria - 46; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 3 (source: NCBI BLink). |
chr1:25778058-25779083 REVERSE
Length = 130
Score = 177 bits (447), Expect = 9e-045
Identities = 92/104 (88%), Positives = 95/104 (91%), Gaps = 4/104 (3%)
Frame = -1
Query: 632 MESVICGRLALAPSSLFNSKSGDKHSVSKGPWVNNRGVLMTKS---ALGKGGGVLDKPII 462
ME+ ICGRLALAPSSLFNSKSGDKH VSKGP V NR +LMT S ALGKGGGVLDKPII
Sbjct: 1 METAICGRLALAPSSLFNSKSGDKHLVSKGPCV-NRSILMTLSTSAALGKGGGVLDKPII 59
Query: 461 EKTTPGRESEFDLRKSKKMAPPYRVILHNDNFNKREYVVQVLMK 330
EKTTPGRESEFDLRKSKK+APPYRVILHNDNFNKREYVVQVLMK
Sbjct: 60 EKTTPGRESEFDLRKSKKIAPPYRVILHNDNFNKREYVVQVLMK 103
Score = 63 bits (152), Expect = 1e-010
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -1
Query: 260 VVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC* 159
VV V +ADAEQHCMQLRGNGLLSSVEPDGGGC*
Sbjct: 97 VVQVLMKADAEQHCMQLRGNGLLSSVEPDGGGC* 130
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,194,490,410
Number of Sequences: 33410
Number of Extensions: 10194490410
Number of Successful Extensions: 338512619
Number of sequences better than 0.0: 0
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