BLASTX 7.6.2
Query= UN19659 /QuerySize=940
(939 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G09920.1 | Symbols: RPB15.9, ATRPB15.9, RPB15.... 99 3e-021
>TAIR9_protein||AT5G09920.1 | Symbols: RPB15.9, ATRPB15.9, RPB15.9.9, NRPB4 |
NRPB4; DNA-directed RNA polymerase | chr5:3096276-3097370 FORWARD
Length = 139
Score = 99 bits (246), Expect = 3e-021
Identities = 54/133 (40%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Frame = +1
Query: 292 KESQPLELKTDKELPENAKCMMDCEAFEILQGVKEQMAVLSEDPSLKLPVSFDRGLEYVK 471
+E ELK E + AKC+M+CE IL+ EQ+ +SEDP ++ F++ L+YVK
Sbjct: 5 EEENAAELKIGDEFLK-AKCLMNCEVSLILEHKFEQLQQISEDPMNQVSQVFEKSLQYVK 63
Query: 472 YGRCYMNPQSVRQILEPLKKHGVSESEMCVIANVCPESIDEVFAFVPSMKGR-KDKISEP 648
Y NP +VRQ+ E L +H ++E E+CV+ N+CPE+++E A VPS+K + + E
Sbjct: 64 RFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHDDEA 123
Query: 649 LEEALAKLSKLKR 687
+E+ L LS +KR
Sbjct: 124 IEKMLNDLSLVKR 136
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,194,490,410
Number of Sequences: 33410
Number of Extensions: 10194490410
Number of Successful Extensions: 338512619
Number of sequences better than 0.0: 0
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