BLASTX 7.6.2
Query= UN19669 /QuerySize=1096
(1095 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q39290|RPAB5_BRANA DNA-directed RNA polymerases I, II, and II... 151 8e-036
sp|Q9SYA6|RPAB5_ARATH DNA-directed RNA polymerases I, II, and II... 137 2e-031
sp|Q55AB6|RPAB5_DICDI DNA-directed RNA polymerases I, II, and II... 125 6e-028
sp|Q32P78|RPAB5_BOVIN DNA-directed RNA polymerases I, II, and II... 122 5e-027
sp|Q6QN04|RPAB5_CHILA DNA-directed RNA polymerases I, II, and II... 122 5e-027
sp|P62875|RPAB5_HUMAN DNA-directed RNA polymerases I, II, and II... 122 5e-027
sp|P62876|RPAB5_MOUSE DNA-directed RNA polymerases I, II, and II... 122 5e-027
sp|Q9VC49|RPAB5_DROME DNA-directed RNA polymerases I, II, and II... 121 2e-026
sp|Q39182|DEF02_ARATH Defensin-like protein 2 OS=Arabidopsis tha... 120 2e-026
sp|Q9ZUL7|DEF01_ARATH Defensin-like protein 1 OS=Arabidopsis tha... 117 1e-025
sp|A8Y1E9|RPAB5_CAEBR DNA-directed RNA polymerases I, II, and II... 116 3e-025
sp|Q9GR61|RPAB5_CAEEL DNA-directed RNA polymerases I, II, and II... 116 3e-025
sp|O13877|RPAB5_SCHPO DNA-directed RNA polymerases I, II, and II... 114 2e-024
sp|Q41914|DEF04_ARATH Defensin-like protein 4 OS=Arabidopsis tha... 112 7e-024
sp|P82659|DFSD2_HELAN Defensin SD2 OS=Helianthus annuus GN=SD2 P... 102 4e-021
sp|Q9C947|DEF05_ARATH Defensin-like protein 5 OS=Arabidopsis tha... 96 5e-019
sp|O65740|DEF2_CAPAN Defensin J1-2 OS=Capsicum annuum PE=1 SV=1 94 2e-018
>sp|Q39290|RPAB5_BRANA DNA-directed RNA polymerases I, II, and III subunit
RPABC5 OS=Brassica napus PE=3 SV=1
Length = 71
Score = 151 bits (381), Expect = 8e-036
Identities = 71/71 (100%)
Frame = -2
Query: 407 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 228
MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 60
Query: 227 NYNTLEKSDNS 195
NYNTLEKSDNS
Sbjct: 61 NYNTLEKSDNS 71
>sp|Q9SYA6|RPAB5_ARATH DNA-directed RNA polymerases I, II, and III subunit
RPABC5 OS=Arabidopsis thaliana GN=At1g61700 PE=2 SV=1
Length = 71
Score = 137 bits (344), Expect = 2e-031
Identities = 62/69 (89%), Positives = 65/69 (94%)
Frame = -2
Query: 407 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 228
MI+PVRCFTCGKVIGNKWD YL+LLQ DY EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIVPVRCFTCGKVIGNKWDTYLELLQADYAEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 227 NYNTLEKSD 201
NYNT+EKSD
Sbjct: 61 NYNTMEKSD 69
>sp|Q55AB6|RPAB5_DICDI DNA-directed RNA polymerases I, II, and III subunit
rpabc5 OS=Dictyostelium discoideum GN=polr2l PE=3 SV=1
Length = 70
Score = 125 bits (313), Expect = 6e-028
Identities = 58/65 (89%), Positives = 60/65 (92%)
Frame = -2
Query: 407 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 228
MIIPVRCFTCGKVIGNKWDAYL LLQ+DYTEGDALDAL L RYCCRRML+THVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDAYLSLLQIDYTEGDALDALCLKRYCCRRMLLTHVDLIEKLL 60
Query: 227 NYNTL 213
NY L
Sbjct: 61 NYTPL 65
>sp|Q32P78|RPAB5_BOVIN DNA-directed RNA polymerases I, II, and III subunit
RPABC5 OS=Bos taurus GN=POLR2L PE=3 SV=1
Length = 67
Score = 122 bits (305), Expect = 5e-027
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -2
Query: 407 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 228
MIIPVRCFTCGK++GNKW+AYL LLQ +YTEGDALDAL L RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60
Query: 227 NYNTLEK 207
NY LEK
Sbjct: 61 NYAPLEK 67
>sp|Q6QN04|RPAB5_CHILA DNA-directed RNA polymerases I, II, and III subunit
RPABC5 OS=Chinchilla lanigera GN=POLR2L PE=3 SV=1
Length = 67
Score = 122 bits (305), Expect = 5e-027
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -2
Query: 407 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 228
MIIPVRCFTCGK++GNKW+AYL LLQ +YTEGDALDAL L RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60
Query: 227 NYNTLEK 207
NY LEK
Sbjct: 61 NYAPLEK 67
>sp|P62875|RPAB5_HUMAN DNA-directed RNA polymerases I, II, and III subunit
RPABC5 OS=Homo sapiens GN=POLR2L PE=1 SV=1
Length = 67
Score = 122 bits (305), Expect = 5e-027
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -2
Query: 407 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 228
MIIPVRCFTCGK++GNKW+AYL LLQ +YTEGDALDAL L RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60
Query: 227 NYNTLEK 207
NY LEK
Sbjct: 61 NYAPLEK 67
>sp|P62876|RPAB5_MOUSE DNA-directed RNA polymerases I, II, and III subunit
RPABC5 OS=Mus musculus GN=Polr2l PE=2 SV=1
Length = 67
Score = 122 bits (305), Expect = 5e-027
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -2
Query: 407 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 228
MIIPVRCFTCGK++GNKW+AYL LLQ +YTEGDALDAL L RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60
Query: 227 NYNTLEK 207
NY LEK
Sbjct: 61 NYAPLEK 67
>sp|Q9VC49|RPAB5_DROME DNA-directed RNA polymerases I, II, and III subunit
RPABC5 OS=Drosophila melanogaster GN=Rpb10 PE=1 SV=1
Length = 67
Score = 121 bits (301), Expect = 2e-026
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -2
Query: 407 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 228
MIIP+RCFTCGKVIGNKW++YL LLQ +YTEGDALDAL L RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPIRCFTCGKVIGNKWESYLGLLQAEYTEGDALDALGLKRYCCRRMLLGHVDLIEKLL 60
Query: 227 NYNTLEK 207
NY LEK
Sbjct: 61 NYAPLEK 67
>sp|Q39182|DEF02_ARATH Defensin-like protein 2 OS=Arabidopsis thaliana GN=PDF2.2
PE=2 SV=1
Length = 77
Score = 120 bits (300), Expect = 2e-026
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +1
Query: 691 GMGPVTVEARTCQSKSHRFKGTCVSTTNCANVCHNEGFPGGNCRGFRRRCLCTRHC 858
GMGPVTVEARTC+S+SHRFKGTCVS +NCANVCHNEGF GGNCRGFRRRC CTRHC
Sbjct: 22 GMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFVGGNCRGFRRRCFCTRHC 77
Score = 117 bits (292), Expect = 2e-025
Identities = 55/62 (88%), Positives = 58/62 (93%)
Frame = +1
Query: 508 MKLSMRLISAVFPLFMIFVATGMGPVTVEARTCESKSHRFKGTCVSTTNCANVCHNEGFP 687
MKLSMRLISAV +FMIFVATGMGPVTVEARTCES+SHRFKGTCVS +NCANVCHNEGF
Sbjct: 1 MKLSMRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFV 60
Query: 688 GG 693
GG
Sbjct: 61 GG 62
>sp|Q9ZUL7|DEF01_ARATH Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3
PE=2 SV=1
Length = 77
Score = 117 bits (293), Expect = 1e-025
Identities = 50/56 (89%), Positives = 51/56 (91%)
Frame = +1
Query: 691 GMGPVTVEARTCQSKSHRFKGTCVSTTNCANVCHNEGFPGGNCRGFRRRCLCTRHC 858
GMGPVTVEARTC+SKSHRFKG CVST NCANVCHNEGF GG CRGFRRRC CTRHC
Sbjct: 22 GMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFGGGKCRGFRRRCYCTRHC 77
Score = 112 bits (280), Expect = 4e-024
Identities = 52/62 (83%), Positives = 55/62 (88%)
Frame = +1
Query: 508 MKLSMRLISAVFPLFMIFVATGMGPVTVEARTCESKSHRFKGTCVSTTNCANVCHNEGFP 687
MKLS+R ISA LFM+F+ATGMGPVTVEARTCESKSHRFKG CVST NCANVCHNEGF
Sbjct: 1 MKLSVRFISAALLLFMVFIATGMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFG 60
Query: 688 GG 693
GG
Sbjct: 61 GG 62
>sp|A8Y1E9|RPAB5_CAEBR DNA-directed RNA polymerases I, II, and III subunit
RPABC5 OS=Caenorhabditis briggsae GN=rpb-10 PE=3 SV=1
Length = 67
Score = 116 bits (290), Expect = 3e-025
Identities = 52/67 (77%), Positives = 59/67 (88%)
Frame = -2
Query: 407 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 228
MIIP+RCFTCGKVIG+KW+ YL LQ +Y+EGDALDAL L RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPIRCFTCGKVIGDKWETYLGFLQSEYSEGDALDALGLRRYCCRRMLLAHVDLIEKLL 60
Query: 227 NYNTLEK 207
NY+ LEK
Sbjct: 61 NYHPLEK 67
>sp|Q9GR61|RPAB5_CAEEL DNA-directed RNA polymerases I, II, and III subunit
RPABC5 OS=Caenorhabditis elegans GN=rpb-10 PE=2 SV=1
Length = 67
Score = 116 bits (290), Expect = 3e-025
Identities = 52/67 (77%), Positives = 59/67 (88%)
Frame = -2
Query: 407 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 228
MIIP+RCFTCGKVIG+KW+ YL LQ +Y+EGDALDAL L RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPIRCFTCGKVIGDKWETYLGFLQSEYSEGDALDALGLRRYCCRRMLLAHVDLIEKLL 60
Query: 227 NYNTLEK 207
NY+ LEK
Sbjct: 61 NYHPLEK 67
>sp|O13877|RPAB5_SCHPO DNA-directed RNA polymerases I, II, and III subunit
RPABC5 OS=Schizosaccharomyces pombe GN=rpb10 PE=1 SV=2
Length = 71
Score = 114 bits (283), Expect = 2e-024
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = -2
Query: 407 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 228
MIIP+RCF+CGKVIG+KWD YL LLQ D TEG+ALD L L RYCCRRM++THVDLIEKLL
Sbjct: 1 MIIPIRCFSCGKVIGDKWDTYLTLLQEDNTEGEALDKLGLQRYCCRRMILTHVDLIEKLL 60
Query: 227 NYNTLEKSDN 198
YN L K N
Sbjct: 61 CYNPLSKQKN 70
>sp|Q41914|DEF04_ARATH Defensin-like protein 4 OS=Arabidopsis thaliana GN=PDF2.1
PE=2 SV=2
Length = 77
Score = 112 bits (278), Expect = 7e-024
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +1
Query: 691 GMGPVTVEARTCQSKSHRFKGTCVSTTNCANVCHNEGFPGGNCRGFRRRCLCTRHC 858
GMGPVTVEARTC S+S RFKG CVS TNC NVCHNEGFPGG+CRGFRRRC CTR+C
Sbjct: 22 GMGPVTVEARTCASQSQRFKGKCVSDTNCENVCHNEGFPGGDCRGFRRRCFCTRNC 77
Score = 108 bits (269), Expect = 8e-023
Identities = 52/62 (83%), Positives = 53/62 (85%)
Frame = +1
Query: 508 MKLSMRLISAVFPLFMIFVATGMGPVTVEARTCESKSHRFKGTCVSTTNCANVCHNEGFP 687
MK SMRLISAV L MIFVATGMGPVTVEARTC S+S RFKG CVS TNC NVCHNEGFP
Sbjct: 1 MKFSMRLISAVLFLVMIFVATGMGPVTVEARTCASQSQRFKGKCVSDTNCENVCHNEGFP 60
Query: 688 GG 693
GG
Sbjct: 61 GG 62
>sp|P82659|DFSD2_HELAN Defensin SD2 OS=Helianthus annuus GN=SD2 PE=2 SV=1
Length = 78
Score = 102 bits (254), Expect = 4e-021
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = +1
Query: 697 GPVTVEARTCQSKSHRFKGTCVSTTNCANVCHNEGFPGGNCRGFRRRCLCTRHC 858
GP+ VEARTC+S+SH+FKGTC+S TNCANVCH+E F GG CRGFRRRC CT HC
Sbjct: 25 GPLVVEARTCESQSHKFKGTCLSDTNCANVCHSERFSGGKCRGFRRRCFCTTHC 78
>sp|Q9C947|DEF05_ARATH Defensin-like protein 5 OS=Arabidopsis thaliana GN=PDF2.4
PE=2 SV=2
Length = 76
Score = 96 bits (236), Expect = 5e-019
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = +1
Query: 694 MGPVTVEARTCQSKSHRFKGTCVSTTNCANVCHNEGFPGGNCRGFRRRCLCTRHC 858
MG VTVEARTC++ S+ F G C+S++NCANVCHNEGF G+CRGFRRRCLCTR C
Sbjct: 22 MGLVTVEARTCETSSNLFNGPCLSSSNCANVCHNEGFSDGDCRGFRRRCLCTRPC 76
>sp|O65740|DEF2_CAPAN Defensin J1-2 OS=Capsicum annuum PE=1 SV=1
Length = 74
Score = 94 bits (232), Expect = 2e-018
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +1
Query: 703 VTVEARTCQSKSHRFKGTCVSTTNCANVCHNEGFPGGNCRGFRRRCLCTRHC 858
+ EARTC+S+SHRFKG C S +NC +VCH EGF GG+CRGFRRRC CTRHC
Sbjct: 23 MVAEARTCESQSHRFKGLCFSKSNCGSVCHTEGFNGGHCRGFRRRCFCTRHC 74
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,872,592,117
Number of Sequences: 518415
Number of Extensions: 81872592117
Number of Successful Extensions: 541474699
Number of sequences better than 0.0: 0
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