BLASTX 7.6.2
Query= UN19670 /QuerySize=1635
(1634 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G43630.1 | Symbols: | FUNCTIONS IN: molecular... 353 2e-097
TAIR9_protein||AT3G59640.1 | Symbols: | glycine-rich protein | ... 229 4e-060
TAIR9_protein||AT3G59640.2 | Symbols: | glycine-rich protein | ... 229 4e-060
TAIR9_protein||AT2G43640.1 | Symbols: | signal recognition part... 218 8e-057
TAIR9_protein||AT2G43640.2 | Symbols: | signal recognition part... 218 8e-057
>TAIR9_protein||AT2G43630.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich
protein (TAIR:AT3G59640.2); Has 48 Blast hits to 48 proteins in 14
species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 0; Plants -
32; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). |
chr2:18096255-18097344 FORWARD
Length = 275
Score = 353 bits (905), Expect = 2e-097
Identities = 187/257 (72%), Positives = 212/257 (82%), Gaps = 11/257 (4%)
Frame = +3
Query: 165 SFTQANCFRPSYHS--PVTTRIPKANGVSTSVPVRATASVSTLFSPLLSHRR---SGKWK 329
S+ A RP+ S P+ + + + TS +RATA+VST FSPLL HRR +GK K
Sbjct: 12 SYYPARITRPNCISSVPIRSSVRFDHFPRTSFTLRATAAVSTQFSPLLDHRRRLPTGKSK 71
Query: 330 QSSAVCLFGGGKDKSNGGGDEISPWKAIEKAMGKKSVEDMLREQIQKKDFYDTESGGGNV 509
QSSAVCLF GGKDK + G DEISPWKAIEKAMGKKSVEDMLREQIQKKDFYDT+S GGN+
Sbjct: 72 QSSAVCLF-GGKDKPD-GSDEISPWKAIEKAMGKKSVEDMLREQIQKKDFYDTDS-GGNM 128
Query: 510 PPRGG--GGGGGNGGERPEGSGGEEDGGVAGIAEETLQVVLATLGFIFLYTYIINGEELI 683
PPRGG GGGGGNG ERPEGSGG EDGG+AGIA+ETLQVVLATLGFIFLYTYII GEEL+
Sbjct: 129 PPRGGGSGGGGGNGEERPEGSGG-EDGGLAGIADETLQVVLATLGFIFLYTYIITGEELV 187
Query: 684 KLARDYFRFLSGKPKTVRLTRALDGWNRFMATMSKPKEYDEYWLEKAIINTPTWYDSPEK 863
KLARDY RFL G+PKTVRLTRA+D WN F+ MS+ + YDEYWLEKAIINTPTWYDSPEK
Sbjct: 188 KLARDYIRFLMGRPKTVRLTRAMDSWNGFLEKMSRQRVYDEYWLEKAIINTPTWYDSPEK 247
Query: 864 YKQVLKAYVDSKTDEQF 914
Y++V+KAYVDS +DE +
Sbjct: 248 YRRVIKAYVDSNSDEAY 264
>TAIR9_protein||AT3G59640.1 | Symbols: | glycine-rich protein |
chr3:22029101-22030300 FORWARD
Length = 247
Score = 229 bits (583), Expect = 4e-060
Identities = 127/235 (54%), Positives = 153/235 (65%), Gaps = 25/235 (10%)
Frame = +3
Query: 162 MSFTQANCFRPSYHSPVTTRIPKANGV--------------STSVPVRATASVSTLFSPL 299
MS TQAN RPS TT+ + ++ A++S+S+ FSPL
Sbjct: 1 MSSTQANLCRPSLFCARTTQTRHVSSAPFMSSLRFDYRPLPKLAIRASASSSMSSQFSPL 60
Query: 300 LSHRRSGKWKQSSAVCLFGGGKDKSNGGGDEISPWKAIEKAMGKKSVEDMLREQIQKKDF 479
+HR + +Q VCL GGKDKSNG + S W+AIEKAMGKKSVEDMLREQIQKKD
Sbjct: 61 QNHRCRNQ-RQGPVVCLL-GGKDKSNGSNELSSTWEAIEKAMGKKSVEDMLREQIQKKD- 117
Query: 480 YDTESGGGNVPP--RGGGGGGGNGGERPEGSGGEEDGGVAGIAEETLQVVLATLGFIFLY 653
G +PP RGGGGGG NGG G EDGG+A +ETLQVVLATLGFIFLY
Sbjct: 118 ------TGGIPPRGRGGGGGGRNGGNNGSGGSSGEDGGLASFGDETLQVVLATLGFIFLY 171
Query: 654 TYIINGEELIKLARDYFRFLSGKPKTVRLTRALDGWNRFMATMSKPKEYDEYWLE 818
YIINGEEL +LARDY R+L G+PK+VRLTR ++GW+RF MS+ K Y+EYWL+
Sbjct: 172 FYIINGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSRFFEKMSRKKVYNEYWLK 226
>TAIR9_protein||AT3G59640.2 | Symbols: | glycine-rich protein |
chr3:22029101-22030300 FORWARD
Length = 247
Score = 229 bits (583), Expect = 4e-060
Identities = 127/235 (54%), Positives = 153/235 (65%), Gaps = 25/235 (10%)
Frame = +3
Query: 162 MSFTQANCFRPSYHSPVTTRIPKANGV--------------STSVPVRATASVSTLFSPL 299
MS TQAN RPS TT+ + ++ A++S+S+ FSPL
Sbjct: 1 MSSTQANLCRPSLFCARTTQTRHVSSAPFMSSLRFDYRPLPKLAIRASASSSMSSQFSPL 60
Query: 300 LSHRRSGKWKQSSAVCLFGGGKDKSNGGGDEISPWKAIEKAMGKKSVEDMLREQIQKKDF 479
+HR + +Q VCL GGKDKSNG + S W+AIEKAMGKKSVEDMLREQIQKKD
Sbjct: 61 QNHRCRNQ-RQGPVVCLL-GGKDKSNGSNELSSTWEAIEKAMGKKSVEDMLREQIQKKD- 117
Query: 480 YDTESGGGNVPP--RGGGGGGGNGGERPEGSGGEEDGGVAGIAEETLQVVLATLGFIFLY 653
G +PP RGGGGGG NGG G EDGG+A +ETLQVVLATLGFIFLY
Sbjct: 118 ------TGGIPPRGRGGGGGGRNGGNNGSGGSSGEDGGLASFGDETLQVVLATLGFIFLY 171
Query: 654 TYIINGEELIKLARDYFRFLSGKPKTVRLTRALDGWNRFMATMSKPKEYDEYWLE 818
YIINGEEL +LARDY R+L G+PK+VRLTR ++GW+RF MS+ K Y+EYWL+
Sbjct: 172 FYIINGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSRFFEKMSRKKVYNEYWLK 226
>TAIR9_protein||AT2G43640.1 | Symbols: | signal recognition particle 14 kDa
family protein / SRP14 family protein | chr2:18097614-18098619 REVERSE
Length = 122
Score = 218 bits (555), Expect = 8e-057
Identities = 113/123 (91%), Positives = 117/123 (95%), Gaps = 1/123 (0%)
Frame = -2
Query: 1474 MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKLQKRKLSEAGESIEYRCLIRAT 1295
MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSK+QKRKLS GESIEYRCLIRAT
Sbjct: 1 MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60
Query: 1294 DAKKTISTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEADKKESTSTSTKPK 1115
D KKT+STSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEA+KKESTST TK K
Sbjct: 61 DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEKKESTST-TKSK 119
Query: 1114 KI* 1106
K+*
Sbjct: 120 KL* 122
>TAIR9_protein||AT2G43640.2 | Symbols: | signal recognition particle 14 kDa
family protein / SRP14 family protein | chr2:18097614-18098619 REVERSE
Length = 122
Score = 218 bits (555), Expect = 8e-057
Identities = 113/123 (91%), Positives = 117/123 (95%), Gaps = 1/123 (0%)
Frame = -2
Query: 1474 MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKLQKRKLSEAGESIEYRCLIRAT 1295
MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSK+QKRKLS GESIEYRCLIRAT
Sbjct: 1 MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60
Query: 1294 DAKKTISTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEADKKESTSTSTKPK 1115
D KKT+STSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEA+KKESTST TK K
Sbjct: 61 DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEKKESTST-TKSK 119
Query: 1114 KI* 1106
K+*
Sbjct: 120 KL* 122
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,194,490,410
Number of Sequences: 33410
Number of Extensions: 10194490410
Number of Successful Extensions: 338512619
Number of sequences better than 0.0: 0
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