BLASTX 7.6.2
Query= UN19710 /QuerySize=1186
(1185 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|12407751|gb|AAG53636.1|AF291712_1 initiation factor 3g [Arabi... 552 7e-155
gi|15229743|ref|NP_187747.1| translation initiation factor eIF-3... 549 6e-154
gi|297820282|ref|XP_002878024.1| initiation factor 3g [Arabidops... 545 7e-153
gi|297829692|ref|XP_002882728.1| initiation factor 3g [Arabidops... 540 3e-151
gi|224101041|ref|XP_002312117.1| predicted protein [Populus tric... 469 5e-130
gi|224109462|ref|XP_002315204.1| predicted protein [Populus tric... 464 2e-128
gi|225449382|ref|XP_002282439.1| PREDICTED: hypothetical protein... 459 6e-127
gi|225434808|ref|XP_002282278.1| PREDICTED: hypothetical protein... 448 8e-124
gi|212720737|ref|NP_001131267.1| hypothetical protein LOC1001925... 446 5e-123
gi|242080387|ref|XP_002444962.1| hypothetical protein SORBIDRAFT... 441 2e-121
gi|326514788|dbj|BAJ99755.1| predicted protein [Hordeum vulgare ... 417 2e-114
gi|297806621|ref|XP_002871194.1| hypothetical protein ARALYDRAFT... 404 2e-110
gi|186520517|ref|NP_196219.3| translation initiation factor eIF-... 400 3e-109
gi|147775526|emb|CAN64942.1| hypothetical protein VITISV_043976 ... 396 6e-108
gi|18252945|gb|AAL62399.1| eukaryotic translation initiation fac... 354 3e-095
gi|238479733|ref|NP_001154607.1| translation initiation factor e... 336 5e-090
gi|118487402|gb|ABK95529.1| unknown [Populus trichocarpa] 314 3e-083
gi|255566482|ref|XP_002524226.1| Eukaryotic translation initiati... 312 9e-083
gi|62319313|dbj|BAD94565.1| eukaryotic translation initiation fa... 182 1e-043
>gi|12407751|gb|AAG53636.1|AF291712_1 initiation factor 3g [Arabidopsis
thaliana]
Length = 294
Score = 552 bits (1420), Expect = 7e-155
Identities = 273/293 (93%), Positives = 280/293 (95%), Gaps = 2/293 (0%)
Frame = -1
Query: 1080 TTDSQQKTSKFRWGEMDEDDDLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRS 901
T DSQQKTSKFRWGEMDEDDD DFLLPPKQVIGPDENGLKT IEYKFNDEGNKVKITTR+
Sbjct: 2 TIDSQQKTSKFRWGEMDEDDDFDFLLPPKQVIGPDENGLKTTIEYKFNDEGNKVKITTRT 61
Query: 900 RVRKLASARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESKA 721
RVRKLASARLNKRAMERR+WPKFGDAANE+AGSHLTMVSTEEILLERPRAPGTKADESKA
Sbjct: 62 RVRKLASARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGTKADESKA 121
Query: 720 AGDGLSQLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPAAP 544
GDGLSQL K GAVLMVCR C KKGDHWTSKCPYKDLAAPTDVF+DKPPTGE+S + AAP
Sbjct: 122 TGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKDLAAPTDVFIDKPPTGESSTMSAAP 181
Query: 543 G-GKAAYVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVSR 367
G GKAAYVPPSMRAGADRS GSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAV+R
Sbjct: 182 GTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTR 241
Query: 366 VYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT 208
VYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT
Sbjct: 242 VYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT 294
>gi|15229743|ref|NP_187747.1| translation initiation factor eIF-3 subunit 4
[Arabidopsis thaliana]
Length = 294
Score = 549 bits (1412), Expect = 6e-154
Identities = 272/293 (92%), Positives = 280/293 (95%), Gaps = 2/293 (0%)
Frame = -1
Query: 1080 TTDSQQKTSKFRWGEMDEDDDLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRS 901
T DSQQKTSKFRWGEMDED+DLDFLLPPKQVIGPDENGLKT IEYKFNDE NKVKITTR+
Sbjct: 2 TIDSQQKTSKFRWGEMDEDEDLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRT 61
Query: 900 RVRKLASARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESKA 721
RVRKLASARLNKRAMERR+WPKFGDAANE+AGSHLTMVSTEEILLERPRAPGTKADESKA
Sbjct: 62 RVRKLASARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGTKADESKA 121
Query: 720 AGDGLSQLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPAAP 544
GDGLSQL K GAVLMVCR C KKGDHWTSKCPYKDLAAPTDVF+DKPPTGE+S + AAP
Sbjct: 122 TGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKDLAAPTDVFIDKPPTGESSTMSAAP 181
Query: 543 G-GKAAYVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVSR 367
G GKAAYVPPSMRAGADRS GSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAV+R
Sbjct: 182 GTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTR 241
Query: 366 VYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT 208
VYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT
Sbjct: 242 VYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT 294
>gi|297820282|ref|XP_002878024.1| initiation factor 3g [Arabidopsis lyrata
subsp. lyrata]
Length = 294
Score = 545 bits (1403), Expect = 7e-153
Identities = 269/293 (91%), Positives = 278/293 (94%), Gaps = 2/293 (0%)
Frame = -1
Query: 1080 TTDSQQKTSKFRWGEMDEDDDLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRS 901
T DSQ+K SKFRWGEMDEDDDLDFLLPPKQVIGPDENGLKT +EYKFNDEGNKVKITTR+
Sbjct: 2 TMDSQEKRSKFRWGEMDEDDDLDFLLPPKQVIGPDENGLKTTMEYKFNDEGNKVKITTRT 61
Query: 900 RVRKLASARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESKA 721
RVRKLASARLNKRAMERR+WPKFGDAANE+AGSHLTMVSTEEILLERPR PGTKADESKA
Sbjct: 62 RVRKLASARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRPPGTKADESKA 121
Query: 720 AGDGLSQLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPAAP 544
GDGLSQL K GAVLMVCR C KKGDHWTSKCPYKDLAAPTD F+DKPPTGE+S + AAP
Sbjct: 122 TGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKDLAAPTDAFIDKPPTGESSTMSAAP 181
Query: 543 G-GKAAYVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVSR 367
G GKAAYVPPSMRAGADRS GSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAV+R
Sbjct: 182 GTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTR 241
Query: 366 VYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT 208
VYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT
Sbjct: 242 VYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT 294
>gi|297829692|ref|XP_002882728.1| initiation factor 3g [Arabidopsis lyrata
subsp. lyrata]
Length = 295
Score = 540 bits (1389), Expect = 3e-151
Identities = 270/294 (91%), Positives = 277/294 (94%), Gaps = 3/294 (1%)
Frame = -1
Query: 1080 TTDSQQK-TSKFRWGEMDEDDDLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTR 904
T DSQQK TSKFRWGEMDEDDD DFLLPPKQVIGPDENGLKT IEYKFNDEG+KVKITTR
Sbjct: 2 TIDSQQKTTSKFRWGEMDEDDDFDFLLPPKQVIGPDENGLKTTIEYKFNDEGSKVKITTR 61
Query: 903 SRVRKLASARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESK 724
+RVRKLASARLNKRAMERR+WPKFGDAANE+AGSHLTMVSTEEILLERPRAPGTKADESK
Sbjct: 62 TRVRKLASARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGTKADESK 121
Query: 723 AAGDGLSQLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPAA 547
A GDGLSQL K GAVLMVCR C KKGDHWTSKCPYKDLAA TD F+DKPPTGE S + AA
Sbjct: 122 ATGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKDLAATTDAFIDKPPTGEPSTMSAA 181
Query: 546 PG-GKAAYVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVS 370
PG GKAAYVPPSMRAGADRS GSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAV+
Sbjct: 182 PGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVT 241
Query: 369 RVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT 208
RVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT
Sbjct: 242 RVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT 295
>gi|224101041|ref|XP_002312117.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 469 bits (1206), Expect = 5e-130
Identities = 234/292 (80%), Positives = 258/292 (88%), Gaps = 5/292 (1%)
Frame = -1
Query: 1080 TTDSQQKTSKFRWGEMDEDD--DLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITT 907
+ D K SK RWGE+DEDD DLDFLLPPKQVIGPD+NG+K VIEYKFND+GNK+KITT
Sbjct: 2 SVDISAKPSKLRWGELDEDDGEDLDFLLPPKQVIGPDDNGIKKVIEYKFNDDGNKIKITT 61
Query: 906 RSRVRKLASARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADES 727
+RVRKLA ARL+KRA+ERR+WPKFGDA +ED GS LTMVSTEEILLERPRAPGTKADE+
Sbjct: 62 TTRVRKLAKARLSKRAVERRNWPKFGDAVHEDVGSRLTMVSTEEILLERPRAPGTKADEA 121
Query: 726 KAAGDGLSQLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPA 550
K AGD L+QL K GAVLMVCRTCGKKGDHWTS+CPYKDLA P + F+DKP ET A+ A
Sbjct: 122 KMAGDNLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFIDKPAATET-AMAA 180
Query: 549 APGGKAAYVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVS 370
+ K AYVPPSMRAGA+R+T GSDMRRRN+ENSVRVTNLSEDTREPDL+ELF FG VS
Sbjct: 181 SGATKGAYVPPSMRAGAERTT-GSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFGHVS 239
Query: 369 RVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPR 214
RVYVAIDQKTGVSRGFGFVNFVS+EDA+RAINKLNGYGYDNLILRVEWATPR
Sbjct: 240 RVYVAIDQKTGVSRGFGFVNFVSKEDAERAINKLNGYGYDNLILRVEWATPR 291
>gi|224109462|ref|XP_002315204.1| predicted protein [Populus trichocarpa]
Length = 294
Score = 464 bits (1192), Expect = 2e-128
Identities = 233/294 (79%), Positives = 255/294 (86%), Gaps = 5/294 (1%)
Frame = -1
Query: 1086 MTTTDSQQKTSKFRWGEMDEDD--DLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKI 913
M+ D K +K RWGE+DE+D DLDFLLPPKQVIGPDENG+K VIEYKFND+GNKVKI
Sbjct: 1 MSVVDKSAKPAKMRWGELDEEDGEDLDFLLPPKQVIGPDENGIKKVIEYKFNDDGNKVKI 60
Query: 912 TTRSRVRKLASARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKAD 733
TT +RVRKLA ARL+KRA+ERR+W KFGDA +ED GS LTMVSTEEILLERPRA G KAD
Sbjct: 61 TTTTRVRKLAKARLSKRALERRNWSKFGDAIHEDVGSRLTMVSTEEILLERPRAHGAKAD 120
Query: 732 ESKAAGDGLSQLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAV 556
E+K AGD L+QL K GAVLMVCRTCGKKGDHWTS+CPYKDLA P + F+DKPP ET A+
Sbjct: 121 ETKIAGDNLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFIDKPPATET-AM 179
Query: 555 PAAPGGKAAYVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGA 376
A K AYVPPSMRAGA+R T GSDMRRRN+ENSVRVTNLSEDTREPDL+ELF FG
Sbjct: 180 AATGATKGAYVPPSMRAGAER-TVGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFGQ 238
Query: 375 VSRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPR 214
VSRVYVAIDQKTGVSRGFGFVNFVS+EDA+RAINKLNGYGYDNLILRVEWATPR
Sbjct: 239 VSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAINKLNGYGYDNLILRVEWATPR 292
>gi|225449382|ref|XP_002282439.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 301
Score = 459 bits (1179), Expect = 6e-127
Identities = 230/286 (80%), Positives = 251/286 (87%), Gaps = 6/286 (2%)
Frame = -1
Query: 1062 KTSKFRWGEMDEDD--DLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRSRVRK 889
K K RWGE+DEDD DLDFLLPP+QVIGP+ENG+K VIEYKFN++GNKVKITT +RVRK
Sbjct: 17 KAEKIRWGELDEDDGEDLDFLLPPRQVIGPEENGIKKVIEYKFNEDGNKVKITTTTRVRK 76
Query: 888 LASARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESKAAGDG 709
LA ARL+KRA+ERRSW KFGDA +ED GS LTMVSTEEILLERPRAPGTKA+E+K AGD
Sbjct: 77 LAKARLSKRAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGTKAEETKIAGDS 136
Query: 708 LSQLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPAAPGGKA 532
L+QL K GAVLMVCRTCGKKGDHWTS+CPYKDLAA TD FVDKPP ET+ V GKA
Sbjct: 137 LAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAAQTDAFVDKPPAAETT-VATTGTGKA 195
Query: 531 AYVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVSRVYVAI 352
AYVPP MR GA+R GSDMRRRN+ENSVRVTNLSEDTREPDL ELF FG VSRVYVAI
Sbjct: 196 AYVPPGMRPGAERV--GSDMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAI 253
Query: 351 DQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPR 214
DQKTG+SRGFGFVNFV++EDA+RAINKLNGYGYDNLILRVEWATPR
Sbjct: 254 DQKTGMSRGFGFVNFVNKEDAERAINKLNGYGYDNLILRVEWATPR 299
>gi|225434808|ref|XP_002282278.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 296
Score = 448 bits (1152), Expect = 8e-124
Identities = 220/284 (77%), Positives = 250/284 (88%), Gaps = 6/284 (2%)
Frame = -1
Query: 1056 SKFRWGEMDEDD--DLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRSRVRKLA 883
SK RWGE++EDD DLDFLLPP+QVIGPD+NG+K VIEYKFND+GNKVKITT +R+RKLA
Sbjct: 14 SKLRWGELEEDDGEDLDFLLPPRQVIGPDDNGIKKVIEYKFNDDGNKVKITTTTRIRKLA 73
Query: 882 SARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESKAAGDGLS 703
ARL+KRA+ERRSW KFGDA +ED GS LTMVSTEEILLERPRAPG+KA+ESK AGD L+
Sbjct: 74 KARLSKRAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKAEESKVAGDSLA 133
Query: 702 QLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPAAPGGKAAY 526
QL K GAVLMVCRTCGKKGDHWTS+CPYKDLA P++ F+DKP E +A + P K Y
Sbjct: 134 QLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAASEGTATASGP-SKGTY 192
Query: 525 VPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVSRVYVAIDQ 346
VPP MRAGA+R+ G++MRRRN+ENSVRVTNLSEDTREPDL ELF FG VSRVYVA+DQ
Sbjct: 193 VPPGMRAGAERT--GTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQ 250
Query: 345 KTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPR 214
KTG+SRGFGFVNFV++EDA+RAINKLNGYGYDNLILRVEWATPR
Sbjct: 251 KTGMSRGFGFVNFVNKEDAERAINKLNGYGYDNLILRVEWATPR 294
>gi|212720737|ref|NP_001131267.1| hypothetical protein LOC100192580 [Zea mays]
Length = 287
Score = 446 bits (1145), Expect = 5e-123
Identities = 221/286 (77%), Positives = 247/286 (86%), Gaps = 10/286 (3%)
Frame = -1
Query: 1053 KFRWGEMDEDD--DLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRSRVRKLAS 880
K RWGE++EDD DLDFLLPP+ V+GPDENGLK VIEY+F+D+GNKV++TT +RVRKLA
Sbjct: 6 KIRWGELEEDDGGDLDFLLPPRVVVGPDENGLKKVIEYRFDDDGNKVRVTTTTRVRKLAR 65
Query: 879 ARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESKAAGDGLSQ 700
ARL++ A+ERR WPKFGDA EDAGS LTMVSTEEILLERPRAPG+KA+ES A+GD L+
Sbjct: 66 ARLSRSAIERRQWPKFGDALKEDAGSRLTMVSTEEILLERPRAPGSKAEESAASGDPLAM 125
Query: 699 LSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPAAPGG--KAA 529
SK GAVLMVCRTCGKKGDHWTSKCPYKDLA PT+ F D+PPT + P APGG K A
Sbjct: 126 ASKGGAVLMVCRTCGKKGDHWTSKCPYKDLAPPTETFTDRPPTSDG---PPAPGGPAKGA 182
Query: 528 YVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVSRVYVAID 349
YVPP+MR GADR+ G MRRRNDENSVRVTNLSEDTREPDL+ELF FG VSRVYVA+D
Sbjct: 183 YVPPTMRGGADRT--GDSMRRRNDENSVRVTNLSEDTREPDLLELFRAFGPVSRVYVAVD 240
Query: 348 QKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRP 211
QKTG SRGFGFVNFV REDA++AINKLNGYGYDNLILRVEWATPRP
Sbjct: 241 QKTGSSRGFGFVNFVHREDAEKAINKLNGYGYDNLILRVEWATPRP 286
>gi|242080387|ref|XP_002444962.1| hypothetical protein SORBIDRAFT_07g001980
[Sorghum bicolor]
Length = 290
Score = 441 bits (1132), Expect = 2e-121
Identities = 219/286 (76%), Positives = 246/286 (86%), Gaps = 10/286 (3%)
Frame = -1
Query: 1053 KFRWGEMDEDD--DLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRSRVRKLAS 880
K RWGE++EDD DLDFLLPP+ V+GPDENGLK VIEY+F+D+GNKV++TT +RVRKLA
Sbjct: 9 KIRWGELEEDDGGDLDFLLPPRVVVGPDENGLKKVIEYRFDDDGNKVRVTTTTRVRKLAR 68
Query: 879 ARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESKAAGDGLSQ 700
ARL++ A+ERR WPKFGDA EDAGS LTMVSTEEILLERPRAPG+KA+E A+GD L+
Sbjct: 69 ARLSRSAIERRQWPKFGDALKEDAGSRLTMVSTEEILLERPRAPGSKAEEPAASGDPLAM 128
Query: 699 LSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPAAPGG--KAA 529
SK GAVLMVCRTCGKKGDHWTSKCPYKDLA PT+ F D+PPT + P APGG K A
Sbjct: 129 ASKGGAVLMVCRTCGKKGDHWTSKCPYKDLAPPTETFTDRPPTSDG---PPAPGGPVKGA 185
Query: 528 YVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVSRVYVAID 349
YVPP+MR GADR+ G MRRRNDENSVRVTNLSEDTREPDL+ELF FG VSRVYVA+D
Sbjct: 186 YVPPTMRGGADRT--GDVMRRRNDENSVRVTNLSEDTREPDLLELFRAFGPVSRVYVAVD 243
Query: 348 QKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRP 211
QKTG SRGFGFVNFV REDA++AI+KLNGYGYDNLILRVEWATPRP
Sbjct: 244 QKTGSSRGFGFVNFVHREDAEKAISKLNGYGYDNLILRVEWATPRP 289
>gi|326514788|dbj|BAJ99755.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 289
Score = 417 bits (1071), Expect = 2e-114
Identities = 214/289 (74%), Positives = 242/289 (83%), Gaps = 10/289 (3%)
Frame = -1
Query: 1056 SKFRWGEMDEDD--DLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRSRVRKLA 883
+K RWGE++EDD DLDFLLPP+ VIGPDENG K IEY+F+D+GNKVK+TT +RVRKLA
Sbjct: 5 AKIRWGELEEDDGGDLDFLLPPRVVIGPDENGFKKTIEYRFDDDGNKVKVTTTTRVRKLA 64
Query: 882 SARLNKRAMERRSWPKFGDAAN-EDAGSHLTMVSTEEILLERPRAPGTKADESKAAGDGL 706
ARL+K A+ERRSW KFGDAA+ +DA + LT+VSTEEILLERPRAPG+KADE A+GD L
Sbjct: 65 RARLSKAAVERRSWGKFGDAASGDDASARLTVVSTEEILLERPRAPGSKADEPSASGDPL 124
Query: 705 SQLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPAAPGG--K 535
+ SK GAVLMVCRTCGKKGDHWTSKCPYKDLA PTD D PPT + PAA GG K
Sbjct: 125 AMASKGGAVLMVCRTCGKKGDHWTSKCPYKDLAPPTDA-SDTPPTSDG---PAALGGPAK 180
Query: 534 AAYVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVSRVYVA 355
+YV P +RAGA + G DMRRRNDENSVRVTNLSEDTREPDL+ELF FGAVSRVYVA
Sbjct: 181 GSYVAPRLRAGAVHTDAGHDMRRRNDENSVRVTNLSEDTREPDLLELFRTFGAVSRVYVA 240
Query: 354 IDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT 208
+DQKTG+SRGFGFVNFV REDA++AI+KLNGYGYDNLIL VE A PRPT
Sbjct: 241 VDQKTGMSRGFGFVNFVHREDAEKAISKLNGYGYDNLILHVEMAAPRPT 289
>gi|297806621|ref|XP_002871194.1| hypothetical protein ARALYDRAFT_487404
[Arabidopsis lyrata subsp. lyrata]
Length = 289
Score = 404 bits (1036), Expect = 2e-110
Identities = 206/292 (70%), Positives = 239/292 (81%), Gaps = 11/292 (3%)
Frame = -1
Query: 1074 DSQQKTSKFRWGEMDEDDD-LDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRSR 898
DS QKT+K RWGE+DE++D DFLLPPKQ+IGPD+NG+K VIEYKFNDEG KVKITT +R
Sbjct: 4 DSMQKTNKLRWGEIDEEEDNFDFLLPPKQMIGPDQNGVKKVIEYKFNDEGKKVKITTTTR 63
Query: 897 VRKLASARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESKAA 718
V+K A L K+A+ERRSW KFGD+ANE+AGS+LTM STE+I+LER RAPG+ A++S +
Sbjct: 64 VQKRA---LTKQAVERRSWNKFGDSANEEAGSYLTMRSTEDIILERIRAPGSNAEQSTIS 120
Query: 717 GDGLSQLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGE--TSAVPAA 547
GD +SQL K GAVLMVCR C KKGDHWTS+CP KDL + +D+P T E TS++
Sbjct: 121 GDSMSQLGKPGAVLMVCRLCHKKGDHWTSRCPQKDLLS----LMDEPLTAETSTSSIAGT 176
Query: 546 PGGKAAYVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVSR 367
GKAAYVPPSMR GADR GSDMR RN+ NSVRVTNLSEDTR PDLMELF PFGAV+R
Sbjct: 177 GTGKAAYVPPSMRDGADRKAAGSDMRSRNEGNSVRVTNLSEDTRGPDLMELFRPFGAVNR 236
Query: 366 VYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRP 211
+VAI QK +SRGFGFV+FV REDAQRAIN LNGYGYDNLILRVEWATP+P
Sbjct: 237 CHVAIHQKASMSRGFGFVSFVRREDAQRAINTLNGYGYDNLILRVEWATPKP 288
>gi|186520517|ref|NP_196219.3| translation initiation factor eIF-3 subunit 4
[Arabidopsis thaliana]
Length = 308
Score = 400 bits (1026), Expect = 3e-109
Identities = 202/286 (70%), Positives = 236/286 (82%), Gaps = 9/286 (3%)
Frame = -1
Query: 1065 QKTSKFRWGEMDEDD-DLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRSRVRK 889
QKT K RWGE+DE++ D DFLLPPKQ+I PD+NG+K VIEYKFN+E KVKITT +RV+K
Sbjct: 7 QKTKKLRWGEIDEEEGDYDFLLPPKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTRVQK 66
Query: 888 LASARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESKAAGDG 709
A L K+A+ERRSW KFGDAA+E++ S+LTM STE+I+LER RAPG+ A++S +GD
Sbjct: 67 RA---LTKQAVERRSWNKFGDAAHEESSSYLTMRSTEDIILERIRAPGSNAEQSTVSGDS 123
Query: 708 LSQLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPAAPGGKA 532
+SQL K GAVLMVCR C KKGDHWTS+CP KDL + +D+P T ETS G+A
Sbjct: 124 MSQLGKPGAVLMVCRLCQKKGDHWTSRCPQKDLLS----LMDEPLTAETSTSTITGTGRA 179
Query: 531 AYVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVSRVYVAI 352
AYVPPSMR GADR GGSDMR R+DENSVRVTNLSEDTR PDLMELF PFGAV+R +VAI
Sbjct: 180 AYVPPSMREGADRKAGGSDMRSRHDENSVRVTNLSEDTRGPDLMELFRPFGAVTRCHVAI 239
Query: 351 DQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPR 214
DQKT +SRGFGFV+FVSREDAQRAINKLNGYGYDNLILRVEW+TP+
Sbjct: 240 DQKTSMSRGFGFVSFVSREDAQRAINKLNGYGYDNLILRVEWSTPK 285
>gi|147775526|emb|CAN64942.1| hypothetical protein VITISV_043976 [Vitis
vinifera]
Length = 311
Score = 396 bits (1015), Expect = 6e-108
Identities = 197/284 (69%), Positives = 234/284 (82%), Gaps = 5/284 (1%)
Frame = -1
Query: 1056 SKFRWGEMDEDD--DLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRSRVRKLA 883
SK WGE++EDD DLDFLLP + VIGPD+NG+K VIEYKF D+GNKVKITT +R+ KLA
Sbjct: 14 SKLLWGELEEDDGEDLDFLLPTRLVIGPDDNGIKKVIEYKFTDDGNKVKITTTTRILKLA 73
Query: 882 SARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESKAAGDGLS 703
ARL+KRA+E RSW KFGDA +ED GS LTMVSTEEILLERPRAPG+KA+ESK AGD L+
Sbjct: 74 KARLSKRAIELRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKAEESKVAGDSLA 133
Query: 702 QLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPAAPGGKAAY 526
QL K GAVLMVCRTCGKKGDHWTS+ PYKDLA P++ F+DKP E +A + P K Y
Sbjct: 134 QLGKGGAVLMVCRTCGKKGDHWTSRSPYKDLAPPSEGFIDKPAVSEGTATASGP-SKGTY 192
Query: 525 VPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVSRVYVAIDQ 346
VPP MRA ADRS+ G+D+RR N+EN ++V NLSEDT E DL ELF FG ++RVYVAID
Sbjct: 193 VPPGMRADADRSS-GTDIRRMNEENVIQVRNLSEDTHEADLRELFSRFGPLTRVYVAIDH 251
Query: 345 KTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPR 214
K G+SRGFG+V FV++EDA+RAINKLNG+GYD+LIL+VEW+ PR
Sbjct: 252 KFGLSRGFGYVYFVNKEDAERAINKLNGFGYDSLILQVEWSPPR 295
>gi|18252945|gb|AAL62399.1| eukaryotic translation initiation factor 3
subunit-like protein [Arabidopsis thaliana]
Length = 276
Score = 354 bits (906), Expect = 3e-095
Identities = 180/254 (70%), Positives = 209/254 (82%), Gaps = 8/254 (3%)
Frame = -1
Query: 972 NGLKTVIEYKFNDEGNKVKITTRSRVRKLASARLNKRAMERRSWPKFGDAANEDAGSHLT 793
NG+K VIEYKFN+E KVKITT +RV+K A L K+A+ERRSW KFGDAA+E++ S+LT
Sbjct: 7 NGVKKVIEYKFNEEDKKVKITTTTRVQKRA---LTKQAVERRSWNKFGDAAHEESSSYLT 63
Query: 792 MVSTEEILLERPRAPGTKADESKAAGDGLSQLSK-GAVLMVCRTCGKKGDHWTSKCPYKD 616
M STE+I+LER RAPG+ A++S +GD +SQL K GAVLMVCR C KKGDHWTS+CP KD
Sbjct: 64 MRSTEDIILERIRAPGSNAEQSTVSGDSMSQLGKPGAVLMVCRLCQKKGDHWTSRCPQKD 123
Query: 615 LAAPTDVFVDKPPTGETSAVPAAPGGKAAYVPPSMRAGADRSTGGSDMRRRNDENSVRVT 436
L + +D+P T ETS G+AAYVPPSMR GADR GGSDMR R+DENSVRVT
Sbjct: 124 LLS----LMDEPLTAETSTSTITGTGRAAYVPPSMREGADRKAGGSDMRSRHDENSVRVT 179
Query: 435 NLSEDTREPDLMELFHPFGAVSRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYG 256
NLSEDTR PDLMELF PFGAV+R +VAIDQKT +SRGFGFV+FVSREDAQRAINKLNGYG
Sbjct: 180 NLSEDTRGPDLMELFRPFGAVTRCHVAIDQKTSMSRGFGFVSFVSREDAQRAINKLNGYG 239
Query: 255 YDNLILRVEWATPR 214
YDNLILRVEW+TP+
Sbjct: 240 YDNLILRVEWSTPK 253
>gi|238479733|ref|NP_001154607.1| translation initiation factor eIF-3 subunit 4
[Arabidopsis thaliana]
Length = 321
Score = 336 bits (861), Expect = 5e-090
Identities = 167/181 (92%), Positives = 171/181 (94%), Gaps = 2/181 (1%)
Frame = -1
Query: 744 TKADESKAAGDGLSQLSK-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGE 568
TKADESKA GDGLSQL K GAVLMVCR C KKGDHWTSKCPYKDLAAPTDVF+DKPPTGE
Sbjct: 141 TKADESKATGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKDLAAPTDVFIDKPPTGE 200
Query: 567 TSAVPAAPG-GKAAYVPPSMRAGADRSTGGSDMRRRNDENSVRVTNLSEDTREPDLMELF 391
+S + AAPG GKAAYVPPSMRAGADRS GSDMRRRNDENSVRVTNLSEDTREPDLMELF
Sbjct: 201 SSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLSEDTREPDLMELF 260
Query: 390 HPFGAVSRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRP 211
HPFGAV+RVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRP
Sbjct: 261 HPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRP 320
Query: 210 T 208
T
Sbjct: 321 T 321
Score = 218 bits (554), Expect = 2e-054
Identities = 112/142 (78%), Positives = 119/142 (83%), Gaps = 1/142 (0%)
Frame = -1
Query: 1080 TTDSQQKTSKFRWGEMDEDDDLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRS 901
T DSQQKTSKFRWGEMDED+DLDFLLPPKQVIGPDENGLKT IEYKFNDE NKVKITTR+
Sbjct: 2 TIDSQQKTSKFRWGEMDEDEDLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRT 61
Query: 900 RVRKLASARLNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESKA 721
RVRKLASARLNKRAMERR+WPKFGDAANE+AGSHLTMVSTEEILLERPRAPG +
Sbjct: 62 RVRKLASARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGDQLANHML 121
Query: 720 AGDGLSQLSKGAVLMVCRTCGK 655
A +L K A+ V C K
Sbjct: 122 ASIPEYEL-KCALTFVAANCTK 142
>gi|118487402|gb|ABK95529.1| unknown [Populus trichocarpa]
Length = 194
Score = 314 bits (802), Expect = 3e-083
Identities = 159/193 (82%), Positives = 170/193 (88%), Gaps = 3/193 (1%)
Frame = -1
Query: 789 VSTEEILLERPRAPGTKADESKAAGDGLSQLSK-GAVLMVCRTCGKKGDHWTSKCPYKDL 613
VSTEEILLERPRA G KADE+K AGD L+QL K GAVLMVCRTCGKKGDHWTS+CPYKDL
Sbjct: 2 VSTEEILLERPRAHGAKADETKIAGDNLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDL 61
Query: 612 AAPTDVFVDKPPTGETSAVPAAPGGKAAYVPPSMRAGADRSTGGSDMRRRNDENSVRVTN 433
A P + F+DKPP ET A+ A K AYVPPSMRAGA+R T GSDMRRRN+ENSVRVTN
Sbjct: 62 AQPPETFIDKPPATET-AMAATGATKGAYVPPSMRAGAER-TVGSDMRRRNEENSVRVTN 119
Query: 432 LSEDTREPDLMELFHPFGAVSRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGY 253
LSEDTREPDL+ELF FG VSRVYVAIDQKTGVSRGFGFVNFVS+EDA+RAINKLNGYGY
Sbjct: 120 LSEDTREPDLLELFRTFGQVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAINKLNGYGY 179
Query: 252 DNLILRVEWATPR 214
DNLILRVEWATPR
Sbjct: 180 DNLILRVEWATPR 192
>gi|255566482|ref|XP_002524226.1| Eukaryotic translation initiation factor 3
RNA-binding subunit, putative [Ricinus communis]
Length = 221
Score = 312 bits (798), Expect = 9e-083
Identities = 155/205 (75%), Positives = 174/205 (84%), Gaps = 5/205 (2%)
Frame = -1
Query: 1047 RWGEMDEDD--DLDFLLPPKQVIGPDENGLKTVIEYKFNDEGNKVKITTRSRVRKLASAR 874
RWGE+DEDD DLDFLLPPKQVIGPD+NG+K VIEYKFND+GNK+KITT +RVRKLA AR
Sbjct: 10 RWGELDEDDGEDLDFLLPPKQVIGPDDNGIKRVIEYKFNDDGNKIKITTTTRVRKLAKAR 69
Query: 873 LNKRAMERRSWPKFGDAANEDAGSHLTMVSTEEILLERPRAPGTKADESKAAGDGLSQLS 694
L+K A+ERR+WPKFGDA +ED G+ LTMVSTEEILLERPRAPGTK +E+K GD L+QL
Sbjct: 70 LSKSAIERRNWPKFGDAVHEDVGARLTMVSTEEILLERPRAPGTKMEETKLPGDNLAQLG 129
Query: 693 K-GAVLMVCRTCGKKGDHWTSKCPYKDLAAPTDVFVDKPPTGETSAVPAAPGGKAAYVPP 517
K GAVLMVCRTCGKKGDHWTS+CPYKDLA TD F DKPP ET A A+ KAAYVPP
Sbjct: 130 KAGAVLMVCRTCGKKGDHWTSRCPYKDLAVSTDTFSDKPPASET-ATAASGTAKAAYVPP 188
Query: 516 SMRAGADRSTGGSDMRRRNDENSVR 442
SMRAGA+R T GSDMRR N+ENS +
Sbjct: 189 SMRAGAER-TSGSDMRRTNEENSTK 212
>gi|62319313|dbj|BAD94565.1| eukaryotic translation initiation factor 3 subunit
like protein [Arabidopsis thaliana]
Length = 89
Score = 182 bits (461), Expect = 1e-043
Identities = 88/89 (98%), Positives = 89/89 (100%)
Frame = -1
Query: 474 MRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVSRVYVAIDQKTGVSRGFGFVNFVSRE 295
MRRRNDENSVRVTNLSEDTREPDLMELFHPFGAV+RVYVAIDQKTGVSRGFGFVNFVSRE
Sbjct: 1 MRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSRE 60
Query: 294 DAQRAINKLNGYGYDNLILRVEWATPRPT 208
DAQRAINKLNGYGYDNLILRVEWATPRPT
Sbjct: 61 DAQRAINKLNGYGYDNLILRVEWATPRPT 89
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,354,205,064,082
Number of Sequences: 15229318
Number of Extensions: 2354205064082
Number of Successful Extensions: 584002404
Number of sequences better than 0.0: 0
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