BLASTX 7.6.2
Query= UN19752 /QuerySize=685
(684 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G05560.1 | Symbols: | 60S ribosomal protein L... 242 3e-064
TAIR9_protein||AT3G05560.2 | Symbols: | 60S ribosomal protein L... 242 3e-064
TAIR9_protein||AT3G05560.3 | Symbols: | 60S ribosomal protein L... 242 3e-064
TAIR9_protein||AT5G27770.1 | Symbols: | 60S ribosomal protein L... 236 9e-063
TAIR9_protein||AT1G02830.1 | Symbols: | 60S ribosomal protein L... 169 2e-042
>TAIR9_protein||AT3G05560.1 | Symbols: | 60S ribosomal protein L22-2 (RPL22B) |
chr3:1614641-1615204 FORWARD
Length = 125
Score = 242 bits (615), Expect = 3e-064
Identities = 120/125 (96%), Positives = 123/125 (98%)
Frame = -2
Query: 596 MSRGSAAVAKGKKKGVSFSIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 417
MSRG AAVAKGKKKGVSF+IDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT
Sbjct: 1 MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60
Query: 416 REKNKITVTSDGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 237
REK+KITVT+DGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG
Sbjct: 61 REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120
Query: 236 EEED* 222
EEED*
Sbjct: 121 EEED* 125
>TAIR9_protein||AT3G05560.2 | Symbols: | 60S ribosomal protein L22-2 (RPL22B) |
chr3:1614641-1615204 FORWARD
Length = 125
Score = 242 bits (615), Expect = 3e-064
Identities = 120/125 (96%), Positives = 123/125 (98%)
Frame = -2
Query: 596 MSRGSAAVAKGKKKGVSFSIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 417
MSRG AAVAKGKKKGVSF+IDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT
Sbjct: 1 MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60
Query: 416 REKNKITVTSDGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 237
REK+KITVT+DGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG
Sbjct: 61 REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120
Query: 236 EEED* 222
EEED*
Sbjct: 121 EEED* 125
>TAIR9_protein||AT3G05560.3 | Symbols: | 60S ribosomal protein L22-2 (RPL22B) |
chr3:1614641-1615204 FORWARD
Length = 125
Score = 242 bits (615), Expect = 3e-064
Identities = 120/125 (96%), Positives = 123/125 (98%)
Frame = -2
Query: 596 MSRGSAAVAKGKKKGVSFSIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 417
MSRG AAVAKGKKKGVSF+IDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT
Sbjct: 1 MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60
Query: 416 REKNKITVTSDGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 237
REK+KITVT+DGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG
Sbjct: 61 REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120
Query: 236 EEED* 222
EEED*
Sbjct: 121 EEED* 125
>TAIR9_protein||AT5G27770.1 | Symbols: | 60S ribosomal protein L22 (RPL22C) |
chr5:9836166-9837113 FORWARD
Length = 125
Score = 236 bits (602), Expect = 9e-063
Identities = 117/125 (93%), Positives = 122/125 (97%)
Frame = -2
Query: 596 MSRGSAAVAKGKKKGVSFSIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 417
MSRG+AA AKGKKKGVSF+IDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSV+IT
Sbjct: 1 MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60
Query: 416 REKNKITVTSDGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 237
REK+KITVT+DGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENE
Sbjct: 61 REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEA 120
Query: 236 EEED* 222
EEED*
Sbjct: 121 EEED* 125
>TAIR9_protein||AT1G02830.1 | Symbols: | 60S ribosomal protein L22 (RPL22A) |
chr1:625145-625608 REVERSE
Length = 128
Score = 169 bits (427), Expect = 2e-042
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = -2
Query: 572 AKGKKKGVSFSIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTITREKNKITV 393
A KKKGVSF IDCSKPVDD I+EIA+LEKFLQERIKV GKAGALG+SV+ITR KI V
Sbjct: 11 AGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRYNGKINV 70
Query: 392 TSDGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 225
++ FSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+N+YE+RYF I + E+
Sbjct: 71 NANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDEVASYEE 126
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,282,326,151
Number of Sequences: 33410
Number of Extensions: 10282326151
Number of Successful Extensions: 343552827
Number of sequences better than 0.0: 0
|