BLASTX 7.6.2
Query= UN19770 /QuerySize=1066
(1065 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 203 2e-052
TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 203 2e-052
TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 201 1e-051
TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 |... 177 2e-044
TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 150 2e-036
TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 149 3e-036
TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 149 3e-036
TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 148 1e-035
TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 143 2e-034
TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 138 8e-033
TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 138 8e-033
TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 134 1e-031
TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 117 1e-026
TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 74 1e-013
TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG ... 70 2e-012
TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HM... 64 2e-010
TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HM... 63 3e-010
>TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 203 bits (515), Expect = 2e-052
Identities = 102/140 (72%), Positives = 122/140 (87%), Gaps = 5/140 (3%)
Frame = +1
Query: 136 MKGGETKAQAKSTDERLKTRGKKAGKKV-KDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 312
MKGGE+KA+A STD+RLKTRG+KAGKK KDPN+PKRPPSAFFVFLE FRKEFNLANPNN
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 313 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKYNMKLANGTSTAGDDDSD 492
KSV VGKAAGA+WK+MT +DKAPYV KAE++KTEY K +Q+YN+KLA+GT+ +DDSD
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNRE-EDDSD 119
Query: 493 KSKSEVNDENDAASDEEEDD 552
KSKSEV ++A S+EE +D
Sbjct: 120 KSKSEV---DEAVSEEEAED 136
>TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 203 bits (515), Expect = 2e-052
Identities = 102/140 (72%), Positives = 122/140 (87%), Gaps = 5/140 (3%)
Frame = +1
Query: 136 MKGGETKAQAKSTDERLKTRGKKAGKKV-KDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 312
MKGGE+KA+A STD+RLKTRG+KAGKK KDPN+PKRPPSAFFVFLE FRKEFNLANPNN
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 313 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKYNMKLANGTSTAGDDDSD 492
KSV VGKAAGA+WK+MT +DKAPYV KAE++KTEY K +Q+YN+KLA+GT+ +DDSD
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNRE-EDDSD 119
Query: 493 KSKSEVNDENDAASDEEEDD 552
KSKSEV ++A S+EE +D
Sbjct: 120 KSKSEV---DEAVSEEEAED 136
>TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 135
Score = 201 bits (509), Expect = 1e-051
Identities = 101/136 (74%), Positives = 119/136 (87%), Gaps = 3/136 (2%)
Frame = +1
Query: 136 MKGGETKAQAKSTDERLKTRGKKAGKKV-KDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 312
MKGGE+KA+A STD+RLKTRG+KAGKK KDPN+PKRPPSAFFVFLE FRKEFNLANPNN
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 313 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKYNMKLANGTSTAGDDDSD 492
KSV VGKAAGA+WK+MT +DKAPYV KAE++KTEY K +Q+YN+KLA+GT+ +DDSD
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNRE-EDDSD 119
Query: 493 KSKSEVNDENDAASDE 540
KSKSEV DE +A D+
Sbjct: 120 KSKSEV-DEAEAEDDD 134
>TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 | HMGB5 (HIGH
MOBILITY GROUP B 5); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor |
chr4:16887363-16888184 REVERSE
Length = 126
Score = 177 bits (447), Expect = 2e-044
Identities = 78/124 (62%), Positives = 103/124 (83%)
Frame = +1
Query: 136 MKGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNK 315
MK +T+ +++STD+RLK RG K GKK KDPN+PK+PPS FFVFL+ FRKEFNLANP+NK
Sbjct: 1 MKDNQTEVESRSTDDRLKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNK 60
Query: 316 SVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKYNMKLANGTSTAGDDDSDK 495
SVG VG+AAG KWK+MT +++AP+V K+++KKTEYA TMQ+YNM+LANG T GDD+ +
Sbjct: 61 SVGNVGRAAGKKWKTMTEEERAPFVAKSQSKKTEYAVTMQQYNMELANGNKTTGDDEKQE 120
Query: 496 SKSE 507
++
Sbjct: 121 KAAD 124
>TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181174 FORWARD
Length = 142
Score = 150 bits (378), Expect = 2e-036
Identities = 79/144 (54%), Positives = 98/144 (68%), Gaps = 5/144 (3%)
Frame = +1
Query: 136 MKGGETKAQAKSTDERLKTRGKKAGK-KVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 312
MKG ++KA+ +ST + + K K KDPNKPKRP SAFFVF+E FR + +P N
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKN 60
Query: 313 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKYNMKLANGTSTAGDDDSD 492
KSV AVGKA G KWKS++ +KAPYV KA+ +K EY K M+ YN KL G D++SD
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKE--DEESD 118
Query: 493 KSKSEVNDENDA--ASDEEEDDD* 558
KS SEVNDE+DA S+EEEDDD*
Sbjct: 119 KSVSEVNDEDDAEDGSEEEEDDD* 142
>TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 145
Score = 149 bits (376), Expect = 3e-036
Identities = 81/147 (55%), Positives = 100/147 (68%), Gaps = 8/147 (5%)
Frame = +1
Query: 136 MKGGETKAQAKSTDERL-KTRGKKAGK---KVKDPNKPKRPPSAFFVFLEGFRKEFNLAN 303
MKG ++K + +S+ + K K AG+ KDPNKPKRP SAFFVF+E FR+ F N
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 304 PNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKYNMKLANGTSTAGDD 483
P NKSV VGKAAG KWKS++ +KAPYV KAE +K EY K ++ YN KL G D+
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKE--DE 118
Query: 484 DSDKSKSEVNDENDA--ASDEEEDDD* 558
+SDKS SEVNDE+DA S+EEEDDD*
Sbjct: 119 ESDKSVSEVNDEDDAEDGSEEEEDDD* 145
>TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 143
Score = 149 bits (376), Expect = 3e-036
Identities = 79/145 (54%), Positives = 97/145 (66%), Gaps = 6/145 (4%)
Frame = +1
Query: 136 MKGGETKAQAKSTDERL-KTRGKKAGK---KVKDPNKPKRPPSAFFVFLEGFRKEFNLAN 303
MKG ++K + +S+ + K K AG+ KDPNKPKRP SAFFVF+E FR+ F N
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 304 PNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKYNMKLANGTSTAGDD 483
P NKSV VGKAAG KWKS++ +KAPYV KAE +K EY K ++ YN KL G D+
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKE--DE 118
Query: 484 DSDKSKSEVNDENDAASDEEEDDD* 558
+SDKS SEVNDE+DA EEDDD*
Sbjct: 119 ESDKSVSEVNDEDDAEDGSEEDDD* 143
>TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 144
Score = 148 bits (371), Expect = 1e-035
Identities = 78/144 (54%), Positives = 97/144 (67%), Gaps = 6/144 (4%)
Frame = +1
Query: 136 MKGGETKAQAKSTDERL-KTRGKKAGK---KVKDPNKPKRPPSAFFVFLEGFRKEFNLAN 303
MKG ++K + +S+ + K K AG+ KDPNKPKRP SAFFVF+E FR+ F N
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 304 PNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKYNMKLANGTSTAGDD 483
P NKSV VGKAAG KWKS++ +KAPYV KAE +K EY K ++ YN KL G D+
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKE--DE 118
Query: 484 DSDKSKSEVNDENDAASDEEEDDD 555
+SDKS SEVNDE+DA EE+DD
Sbjct: 119 ESDKSVSEVNDEDDAEDGSEEEDD 142
>TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181170 FORWARD
Length = 141
Score = 143 bits (359), Expect = 2e-034
Identities = 74/138 (53%), Positives = 92/138 (66%), Gaps = 3/138 (2%)
Frame = +1
Query: 136 MKGGETKAQAKSTDERLKTRGKKAGK-KVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 312
MKG ++KA+ +ST + + K K KDPNKPKRP SAFFVF+E FR + +P N
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKN 60
Query: 313 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKYNMKLANGTSTAGDDDSD 492
KSV AVGKA G KWKS++ +KAPYV KA+ +K EY K M+ YN KL G D++SD
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKE--DEESD 118
Query: 493 KSKSEVNDENDAASDEEE 546
KS SEVNDE+DA EE
Sbjct: 119 KSVSEVNDEDDAEDGSEE 136
>TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 138 bits (346), Expect = 8e-033
Identities = 76/154 (49%), Positives = 99/154 (64%), Gaps = 8/154 (5%)
Frame = +1
Query: 82 EGKKENPNVRSFVHRSREMKGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFF 261
+GK + + + + K G+ KA A+ +R +TR +K K KDPNKPKR PSAFF
Sbjct: 5 KGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKR-ETRKEKKAK--KDPNKPKRAPSAFF 61
Query: 262 VFLEGFRKEFNLANPNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKY 441
VFLE FR F NPN K+V AVGKA G KWKSM+ +KAPY EKA +K EY K M Y
Sbjct: 62 VFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAY 121
Query: 442 NMKLANGTSTAGDDDSDKSKSEVNDENDAASDEE 543
N L G+ D+S+KS+SE+NDE++A+ +EE
Sbjct: 122 NKNLEEGS-----DESEKSRSEINDEDEASGEEE 150
>TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 138 bits (346), Expect = 8e-033
Identities = 76/154 (49%), Positives = 99/154 (64%), Gaps = 8/154 (5%)
Frame = +1
Query: 82 EGKKENPNVRSFVHRSREMKGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFF 261
+GK + + + + K G+ KA A+ +R +TR +K K KDPNKPKR PSAFF
Sbjct: 5 KGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKR-ETRKEKKAK--KDPNKPKRAPSAFF 61
Query: 262 VFLEGFRKEFNLANPNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKY 441
VFLE FR F NPN K+V AVGKA G KWKSM+ +KAPY EKA +K EY K M Y
Sbjct: 62 VFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAY 121
Query: 442 NMKLANGTSTAGDDDSDKSKSEVNDENDAASDEE 543
N L G+ D+S+KS+SE+NDE++A+ +EE
Sbjct: 122 NKNLEEGS-----DESEKSRSEINDEDEASGEEE 150
>TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 186
Score = 134 bits (336), Expect = 1e-031
Identities = 74/152 (48%), Positives = 97/152 (63%), Gaps = 8/152 (5%)
Frame = +1
Query: 82 EGKKENPNVRSFVHRSREMKGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFF 261
+GK + + + + K G+ KA A+ +R +TR +K K KDPNKPKR PSAFF
Sbjct: 5 KGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKR-ETRKEKKAK--KDPNKPKRAPSAFF 61
Query: 262 VFLEGFRKEFNLANPNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKY 441
VFLE FR F NPN K+V AVGKA G KWKSM+ +KAPY EKA +K EY K M Y
Sbjct: 62 VFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAY 121
Query: 442 NMKLANGTSTAGDDDSDKSKSEVNDENDAASD 537
N L G+ D+S+KS+SE+NDE++A+ +
Sbjct: 122 NKNLEEGS-----DESEKSRSEINDEDEASGE 148
>TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181193 FORWARD
Length = 148
Score = 117 bits (293), Expect = 1e-026
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
Frame = +1
Query: 136 MKGGETKAQAKSTDERLKTRGKKAGK-KVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 312
MKG ++KA+ +ST + + K K KDPNKPKRP SAFFVF+E FR + +P N
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKN 60
Query: 313 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKYNMKL 453
KSV AVGKA G KWKS++ +KAPYV KA+ +K EY K M+ YN KL
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKL 107
>TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor |
chr5:7888712-7890111 REVERSE
Length = 242
Score = 74 bits (181), Expect = 1e-013
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Frame = +1
Query: 118 VHRSREMKGGETKAQAKSTDERLKTRGKKAGKKVKD---PNKPKRPPSAFFVFLEGFRKE 288
V E K + + ++D R KK + K NKPKRP +AFF+F+ FRK
Sbjct: 73 VETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRKT 132
Query: 289 FNLANPNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKYNM-KLANGT 465
F + N K G KWKS+T ++K Y++KA K EY K+++ + +
Sbjct: 133 FK-SEHNGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLESNDADEEEEDE 191
Query: 466 STAGDDDSDKSKSEVNDENDAASDEEEDDD 555
DD D + +V+D+++ E E+ D
Sbjct: 192 EKQSDDVDDAEEKQVDDDDEVEEKEVENTD 221
>TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG (ARABIDOPSIS
THALIANA HIGH MOBILITY GROUP); transcription factor |
chr3:10784954-10788498 FORWARD
Length = 647
Score = 70 bits (170), Expect = 2e-012
Identities = 43/118 (36%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +1
Query: 139 KGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKS 318
KG K + + DE R K KK KDPN PKR S F F + R +P +
Sbjct: 532 KGLPPKRKTVAADEGSSKR--KKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHP-GIA 588
Query: 319 VGAVGKAAGAKWKSMTADDKAPYVEKAETKKTEYAKTMQKYNMKLANGTSTAGDDDSD 492
G VGK G KW+ M+ADDK PY KA+ K Y + Y + D DS+
Sbjct: 589 FGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYKDEISDYKNPQPMNVDSGNDSDSN 646
>TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:6760898-6763272 REVERSE
Length = 447
Score = 64 bits (153), Expect = 2e-010
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Frame = +1
Query: 199 KKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAVGKAAGAKWKSMTADDK 378
KK KK+KDP KPK+P SA+ ++ R NKSV V K AG +WK+++ + K
Sbjct: 234 KKKAKKIKDPLKPKQPISAYLIYANERRAAL---KGENKSVIEVAKMAGEEWKNLSEEKK 290
Query: 379 APYVEKAETKKTEYAKTMQKY 441
APY + A+ K Y + M+ Y
Sbjct: 291 APYDQMAKKNKEIYLQEMEGY 311
>TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:12390228-12392516 FORWARD
Length = 457
Score = 63 bits (151), Expect = 3e-010
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 199 KKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAVGKAAGAKWKSMTADDK 378
KK KK KDP KPK P SAF V+ R NKSV V K G +WK+++ K
Sbjct: 243 KKKNKKEKDPLKPKHPVSAFLVYANERRAAL---REENKSVVEVAKITGEEWKNLSDKKK 299
Query: 379 APYVEKAETKKTEYAKTMQKY 441
APY + A+ K Y + M++Y
Sbjct: 300 APYEKVAKKNKETYLQAMEEY 320
Score = 58 bits (138), Expect = 1e-008
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 7/183 (3%)
Frame = +1
Query: 19 NSTSDLAKKR---RKRSESSSKTKEGKKENPNVR-SFVHRSREMKGGETKAQAKSTDERL 186
+ T +L K++ ++ E +T++ ++E V + + +E K T A +S+ +
Sbjct: 63 DKTEELLKEKDEILRKKEEELETRDAEQEKLKVELKKLQKMKEFKPNMTFACGQSSLTQA 122
Query: 187 KTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAVGKAAGAKWKSMT 366
+ + K KK KD + KRP S++ ++ + E NP GAKWKS++
Sbjct: 123 E-QEKANKKKKKDCPETKRPSSSYVLWCKDQWTEVKKENP-EADFKETSNILGAKWKSLS 180
Query: 367 ADDKAPYVEKAETKKTEYAKTMQKYNMKLANGTSTAGDDDSDKSKSEVNDENDAASDEEE 546
A+DK PY E+ + +K Y + + K + DD ++ E+ D+ E E
Sbjct: 181 AEDKKPYEERYQVEKEAYLQVIAK-EKREKEAMKLLEDDQKQRTAMELLDQYLNFVQEAE 239
Query: 547 DDD 555
D+
Sbjct: 240 QDN 242
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,282,326,151
Number of Sequences: 33410
Number of Extensions: 10282326151
Number of Successful Extensions: 343552827
Number of sequences better than 0.0: 0
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