BLASTX 7.6.2

Query= UN19790 /QuerySize=773
        (772 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G01410.1 | Symbols:  | RNase H domain-containi...    182   2e-046
TAIR9_protein||AT3G01410.2 | Symbols:  | RNase H domain-containi...    182   2e-046
TAIR9_protein||AT5G51080.1 | Symbols:  | RNase H domain-containi...    140   1e-033
TAIR9_protein||AT5G51080.2 | Symbols:  | RNase H domain-containi...    140   1e-033
TAIR9_protein||AT5G51080.3 | Symbols:  | RNase H domain-containi...    140   1e-033
TAIR9_protein||AT1G24090.1 | Symbols:  | RNase H domain-containi...    129   2e-030

>TAIR9_protein||AT3G01410.1 | Symbols:  | RNase H domain-containing protein |
        chr3:153650-155439 REVERSE

          Length = 295

 Score =  182 bits (461), Expect = 2e-046
 Identities = 90/140 (64%), Positives = 109/140 (77%)
 Frame = +2

Query: 119 CTIEFDGASRGNPGRAGAGAVLRAPDNTVIYSSREGLGVATNNVAEYRALNLGLESALNQ 298
           CTIEFDGAS+GNPG+AGAGAVLRA DN+V++  REG+G ATNNVAEYRAL LGL SAL++
Sbjct: 155 CTIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDK 214

Query: 299 GFTNVRVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPREFNSAAD 478
           GF NV V GDS LVC QV+G W T  PKM +LC QA+ELM+ F + D++H+ RE NS AD
Sbjct: 215 GFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEAD 274

Query: 479 AQANRATNLAEGEYQQDNAG 538
            QAN A  LA+G+ Q  + G
Sbjct: 275 KQANSAIFLADGQTQVISGG 294

>TAIR9_protein||AT3G01410.2 | Symbols:  | RNase H domain-containing protein |
        chr3:153650-155439 REVERSE

          Length = 295

 Score =  182 bits (461), Expect = 2e-046
 Identities = 90/140 (64%), Positives = 109/140 (77%)
 Frame = +2

Query: 119 CTIEFDGASRGNPGRAGAGAVLRAPDNTVIYSSREGLGVATNNVAEYRALNLGLESALNQ 298
           CTIEFDGAS+GNPG+AGAGAVLRA DN+V++  REG+G ATNNVAEYRAL LGL SAL++
Sbjct: 155 CTIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDK 214

Query: 299 GFTNVRVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPREFNSAAD 478
           GF NV V GDS LVC QV+G W T  PKM +LC QA+ELM+ F + D++H+ RE NS AD
Sbjct: 215 GFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEAD 274

Query: 479 AQANRATNLAEGEYQQDNAG 538
            QAN A  LA+G+ Q  + G
Sbjct: 275 KQANSAIFLADGQTQVISGG 294

>TAIR9_protein||AT5G51080.1 | Symbols:  | RNase H domain-containing protein |
        chr5:20769022-20770675 REVERSE

          Length = 323

 Score =  140 bits (351), Expect = 1e-033
 Identities = 65/135 (48%), Positives = 95/135 (70%)
 Frame = +2

Query: 119 CTIEFDGASRGNPGRAGAGAVLRAPDNTVIYSSREGLGVATNNVAEYRALNLGLESALNQ 298
           C IEFDGAS+GNPG +GA AVL+  D ++I+  R+GLG+ATNN AEY  L LGL+ A+ +
Sbjct: 186 CIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEK 245

Query: 299 GFTNVRVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPREFNSAAD 478
           G+T ++V+ DS+LVC Q++G+W      +++L  +A++L  +  S ++ HV R  NS AD
Sbjct: 246 GYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDAD 305

Query: 479 AQANRATNLAEGEYQ 523
            QAN A  L+EGE +
Sbjct: 306 EQANMAARLSEGEVE 320

>TAIR9_protein||AT5G51080.2 | Symbols:  | RNase H domain-containing protein |
        chr5:20769022-20770675 REVERSE

          Length = 323

 Score =  140 bits (351), Expect = 1e-033
 Identities = 65/135 (48%), Positives = 95/135 (70%)
 Frame = +2

Query: 119 CTIEFDGASRGNPGRAGAGAVLRAPDNTVIYSSREGLGVATNNVAEYRALNLGLESALNQ 298
           C IEFDGAS+GNPG +GA AVL+  D ++I+  R+GLG+ATNN AEY  L LGL+ A+ +
Sbjct: 186 CIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEK 245

Query: 299 GFTNVRVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPREFNSAAD 478
           G+T ++V+ DS+LVC Q++G+W      +++L  +A++L  +  S ++ HV R  NS AD
Sbjct: 246 GYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDAD 305

Query: 479 AQANRATNLAEGEYQ 523
            QAN A  L+EGE +
Sbjct: 306 EQANMAARLSEGEVE 320

>TAIR9_protein||AT5G51080.3 | Symbols:  | RNase H domain-containing protein |
        chr5:20769022-20770486 REVERSE

          Length = 260

 Score =  140 bits (351), Expect = 1e-033
 Identities = 65/135 (48%), Positives = 95/135 (70%)
 Frame = +2

Query: 119 CTIEFDGASRGNPGRAGAGAVLRAPDNTVIYSSREGLGVATNNVAEYRALNLGLESALNQ 298
           C IEFDGAS+GNPG +GA AVL+  D ++I+  R+GLG+ATNN AEY  L LGL+ A+ +
Sbjct: 123 CIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEK 182

Query: 299 GFTNVRVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPREFNSAAD 478
           G+T ++V+ DS+LVC Q++G+W      +++L  +A++L  +  S ++ HV R  NS AD
Sbjct: 183 GYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDAD 242

Query: 479 AQANRATNLAEGEYQ 523
            QAN A  L+EGE +
Sbjct: 243 EQANMAARLSEGEVE 257

>TAIR9_protein||AT1G24090.1 | Symbols:  | RNase H domain-containing protein |
        chr1:8520834-8524690 FORWARD

          Length = 536

 Score =  129 bits (323), Expect = 2e-030
 Identities = 65/146 (44%), Positives = 97/146 (66%), Gaps = 3/146 (2%)
 Frame = +2

Query:  77 MARREDRSLPKDSYCTIEFDGASRGNPGRAGAGAVLRAPDNTVIYSSREGLGVATNNVAE 256
           +++ E  +   D  C IEFDGAS+GNPG +GA AVL+  D ++I   R+GLG+ATNN AE
Sbjct: 203 LSKVEPSAYISDETCFIEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAE 262

Query: 257 YRALNLGLESALNQGFTNVRVQGDSQLVC---KQVRGEWATRDPKMTQLCGQAQELMSQF 427
           Y AL LGL+ A+ +G+ N++V+GDS+LVC   +Q++G+W      + +L  +A+ L ++ 
Sbjct: 263 YHALILGLKYAIEKGYKNIKVKGDSKLVCMQKQQIKGQWKVNHEVLAKLHKEAKLLCNKC 322

Query: 428 NSCDVQHVPREFNSAADAQANRATNL 505
            S ++ HV R  N+ AD QAN A  L
Sbjct: 323 VSFEISHVLRNLNADADEQANLAVRL 348

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,282,326,151
Number of Sequences: 33410
Number of Extensions: 10282326151
Number of Successful Extensions: 343552827
Number of sequences better than 0.0: 0