BLASTX 7.6.2
Query= UN19831 /QuerySize=1518
(1517 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7NS85|RLMN_CHRVO Ribosomal RNA large subunit methyltransfera... 261 1e-068
sp|A9LZN6|RLMN_NEIM0 Ribosomal RNA large subunit methyltransfera... 255 6e-067
sp|Q9JZ42|RLMN_NEIMB Ribosomal RNA large subunit methyltransfera... 255 1e-066
sp|Q2Y6F3|RLMN_NITMU Ribosomal RNA large subunit methyltransfera... 254 1e-066
sp|A1KUD6|RLMN_NEIMF Ribosomal RNA large subunit methyltransfera... 253 2e-066
sp|A1ISB3|RLMN_NEIMA Ribosomal RNA large subunit methyltransfera... 253 4e-066
sp|Q1H0U6|RLMN_METFK Ribosomal RNA large subunit methyltransfera... 251 1e-065
sp|A5G209|RLMN_ACICJ Ribosomal RNA large subunit methyltransfera... 243 4e-063
sp|Q0A989|RLMN_ALHEH Ribosomal RNA large subunit methyltransfera... 227 2e-058
sp|B1ZG98|RLMN_METPB Ribosomal RNA large subunit methyltransfera... 180 3e-044
sp|B1M1U6|RLMN_METRJ Ribosomal RNA large subunit methyltransfera... 179 4e-044
sp|A8LNF0|RLMN_DINSH Ribosomal RNA large subunit methyltransfera... 179 6e-044
sp|A9W383|RLMN_METEP Ribosomal RNA large subunit methyltransfera... 179 6e-044
sp|B0UQR1|RLMN_METS4 Ribosomal RNA large subunit methyltransfera... 178 1e-043
sp|A7HSW7|RLMN_PARL1 Ribosomal RNA large subunit methyltransfera... 178 2e-043
sp|Q16DM2|RLMN_ROSDO Ribosomal RNA large subunit methyltransfera... 177 2e-043
sp|B8EIR0|RLMN_METSB Ribosomal RNA large subunit methyltransfera... 176 4e-043
sp|A1B4Z8|RLMN_PARDP Ribosomal RNA large subunit methyltransfera... 176 4e-043
sp|Q3SL73|RLMN_THIDA Ribosomal RNA large subunit methyltransfera... 176 5e-043
sp|A3PFQ4|RLMN_RHOS1 Ribosomal RNA large subunit methyltransfera... 176 6e-043
>sp|Q7NS85|RLMN_CHRVO Ribosomal RNA large subunit methyltransferase N
OS=Chromobacterium violaceum GN=rlmN PE=3 SV=1
Length = 364
Score = 261 bits (665), Expect = 1e-068
Identities = 149/323 (46%), Positives = 197/323 (60%), Gaps = 9/323 (2%)
Frame = +2
Query: 353 FRPGQAMMLWKRLYKDNIWAQDVDQLEGLNKDFKRMIGEHAEFGALSFKDVRSASDGTRK 532
FR Q M ++ +D D D + L K + + E AE S +++SDGTRK
Sbjct: 25 FRAKQVMRWMHQMAED-----DFDAMTDLAKSLRAKLHERAEVRVPSLMTGQASSDGTRK 79
Query: 533 ILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQA 712
L + G +ETV IP D R T+CVSSQVGCA+ C FC TGR G RNL+ AEI+ Q
Sbjct: 80 WLLDVGTGNGVETVFIPED-DRGTLCVSSQVGCALECTFCSTGRQGFNRNLSTAEIIGQL 138
Query: 713 VYARRLLS---HEVGSITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTS 883
+A + + ++NVV MGMGEP N +NV+ A IM+D++G S R+VT+STS
Sbjct: 139 WWANKAMGVTPKNERVVSNVVMMGMGEPLANFDNVVSAMQIMLDDHGYGLSRRRVTLSTS 198
Query: 884 GLVPQLKRFLRECNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKV 1063
GLVPQ+ R EC ALAVSL+A D +R+ I+PIN+KY LS L+ R L + +
Sbjct: 199 GLVPQMDRLREECPVALAVSLHAPNDAIRDVIVPINKKYPLSELMAACRRYLEKAPRDFI 258
Query: 1064 LFEYVMLAGVNDRMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLA 1243
FEYVML GVNDR E AR+L+ELV+ +PCK NLI FNP S + + + + FR +L
Sbjct: 259 TFEYVMLDGVNDRPEHARQLLELVRDVPCKFNLIPFNPFPNSGYDRSSNNAIRIFREILQ 318
Query: 1244 EGGCTVLMRFSRGNDQMAACGQL 1312
E G V +R +RG+D AACGQL
Sbjct: 319 EQGYVVTVRKTRGDDIDAACGQL 341
>sp|A9LZN6|RLMN_NEIM0 Ribosomal RNA large subunit methyltransferase N
OS=Neisseria meningitidis serogroup C (strain 053442) GN=rlmN PE=3
SV=1
Length = 364
Score = 255 bits (651), Expect = 6e-067
Identities = 141/324 (43%), Positives = 200/324 (61%), Gaps = 6/324 (1%)
Frame = +2
Query: 350 GFRPGQAMMLWKRLYKDNIWAQDVDQLEGLNKDFKRMIGEHAEFGALSFKDVRSASDGTR 529
G +P +A + + +++ AQ+ +++ L K + + E A + +SDGTR
Sbjct: 21 GEKPFRAKQVMRWMHQSG--AQNFNEMTDLAKSLRHKLNEQASIEIPKLMMSQESSDGTR 78
Query: 530 KILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQ 709
K L + G +ETV IP + R T+C+SSQVGCA+ C FC TGR G RNLTAAEI+ Q
Sbjct: 79 KWLLDVGTGNGVETVFIP-ESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQ 137
Query: 710 AVYARRLLS---HEVGSITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVST 880
+A + + I+NVV MGMGEP N +NV+ A +IM+D++G S R+VTVST
Sbjct: 138 LWWANKAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVST 197
Query: 881 SGLVPQLKRFLRECNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYK 1060
SG+VPQ+ R ALAVSL+A+ DEVRN I+P+N+KY L L+ + L +
Sbjct: 198 SGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDF 257
Query: 1061 VLFEYVMLAGVNDRMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVL 1240
+ FEYVML G+NDR + AR L+ELV+ +PCK NLI FNP S + + + + FR++L
Sbjct: 258 ITFEYVMLDGINDRAQHARELIELVKDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDIL 317
Query: 1241 AEGGCTVLMRFSRGNDQMAACGQL 1312
+ G V +R +RG+D AACGQL
Sbjct: 318 QQAGFVVTVRKTRGDDIDAACGQL 341
>sp|Q9JZ42|RLMN_NEIMB Ribosomal RNA large subunit methyltransferase N
OS=Neisseria meningitidis serogroup B GN=rlmN PE=3 SV=1
Length = 364
Score = 255 bits (649), Expect = 1e-066
Identities = 141/324 (43%), Positives = 199/324 (61%), Gaps = 6/324 (1%)
Frame = +2
Query: 350 GFRPGQAMMLWKRLYKDNIWAQDVDQLEGLNKDFKRMIGEHAEFGALSFKDVRSASDGTR 529
G +P +A + + +++ AQ+ D++ L K + + E A + +SDGTR
Sbjct: 21 GEKPFRAKQVMRWMHQSG--AQNFDEMTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTR 78
Query: 530 KILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQ 709
K L + G +ETV IP + R T+C+SSQVGCA+ C FC TGR G RNLTAAEI+ Q
Sbjct: 79 KWLLDVGTGNGVETVFIP-ESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQ 137
Query: 710 AVYARRLLS---HEVGSITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVST 880
+A + + I+NVV MGMGEP N +NV+ A +IM+D++G S R+VTVST
Sbjct: 138 LWWANKAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVST 197
Query: 881 SGLVPQLKRFLRECNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYK 1060
SG+VPQ+ R ALAVSL+A+ DEVRN I+P+N+KY L L+ + L +
Sbjct: 198 SGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDF 257
Query: 1061 VLFEYVMLAGVNDRMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVL 1240
+ FEYVML G+ND+ + AR L+ELV +PCK NLI FNP S + + + + FR++L
Sbjct: 258 ITFEYVMLDGINDKAQHARELIELVTDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDIL 317
Query: 1241 AEGGCTVLMRFSRGNDQMAACGQL 1312
+ G V +R +RG+D AACGQL
Sbjct: 318 QQAGFVVTVRKTRGDDIDAACGQL 341
>sp|Q2Y6F3|RLMN_NITMU Ribosomal RNA large subunit methyltransferase N
OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=rlmN
PE=3 SV=1
Length = 365
Score = 254 bits (648), Expect = 1e-066
Identities = 149/348 (42%), Positives = 200/348 (57%), Gaps = 12/348 (3%)
Frame = +2
Query: 350 GFRPGQAMMLWKRLYKDNIWAQDVDQLEGLNKDFKRMIGEHAEFGALSFKDVRSASDGTR 529
G +P +A L + +++ D D + L K + + A +ASDGTR
Sbjct: 21 GEKPFRARQLLRWIHRTG--EADFDAMSDLAKGLREKLAAAAVIEPPKVISDHTASDGTR 78
Query: 530 KILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQ 709
K L ++ G IETV IP + R T+C+SSQVGCA+ C FC TGR G RNLT AEI+ Q
Sbjct: 79 KWLLSVGAGNGIETVYIP-ETSRGTLCISSQVGCALACAFCSTGRQGFNRNLTVAEIIGQ 137
Query: 710 AVYARRLLSHEVGS-------ITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKV 868
+A + L+ S ITN+V MGMGEP N ENV+ + ++M+D+N S R+V
Sbjct: 138 LWWANKALTETFTSEAGRERPITNIVMMGMGEPLTNFENVVTSLDLMLDDNAYGLSRRRV 197
Query: 869 TVSTSGLVPQLKRFLRECNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSM 1048
TVSTSG++P + R C ALAVSL+A D +R+ ++PINRKY + LL L S
Sbjct: 198 TVSTSGIIPAMDRLRERCPVALAVSLHAPNDALRDQLVPINRKYPIRELLGACERYLQSA 257
Query: 1049 HKYKVLFEYVMLAGVNDRMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKF 1228
+ + FEYVML GVND + AR LV+LV+ IPCK+NLI FNP S F + + + +F
Sbjct: 258 PRDFITFEYVMLDGVNDSVAQARELVQLVRDIPCKLNLIPFNPFPDSGFRRSSANAVSRF 317
Query: 1229 RNVLAEGGCTVLMRFSRGNDQMAACGQLGMLGATQAPVMRVPEQFRTA 1372
R+VL E G +R +RG+D AACGQL G RVP A
Sbjct: 318 RDVLMEAGLVTTVRKTRGDDIAAACGQLA--GKVLDKTRRVPRNIAEA 363
>sp|A1KUD6|RLMN_NEIMF Ribosomal RNA large subunit methyltransferase N
OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532
/ FAM18) GN=rlmN PE=3 SV=1
Length = 364
Score = 253 bits (646), Expect = 2e-066
Identities = 140/324 (43%), Positives = 200/324 (61%), Gaps = 6/324 (1%)
Frame = +2
Query: 350 GFRPGQAMMLWKRLYKDNIWAQDVDQLEGLNKDFKRMIGEHAEFGALSFKDVRSASDGTR 529
G +P +A + + +++ AQ+ +++ L K + + E A + +SDGTR
Sbjct: 21 GEKPFRAKQVMRWMHQSG--AQNFNEMTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTR 78
Query: 530 KILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQ 709
K L + G +ETV IP + R T+C+SSQVGCA+ C FC TGR G RNLTAAEI+ Q
Sbjct: 79 KWLLDVGTGNGVETVFIP-ESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQ 137
Query: 710 AVYARRLLS---HEVGSITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVST 880
+A + + I+NVV MGMGEP N +NV+ A +IM+D++G S R+VTVST
Sbjct: 138 LWWANKAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVST 197
Query: 881 SGLVPQLKRFLRECNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYK 1060
SG+VPQ+ R ALAVSL+A+ DEVRN I+P+N+KY L L+ + L +
Sbjct: 198 SGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDF 257
Query: 1061 VLFEYVMLAGVNDRMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVL 1240
+ FEYVML G+ND+ + AR L+ELV+ +PCK NLI FNP S + + + + FR++L
Sbjct: 258 ITFEYVMLDGINDKAQHARELIELVKDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDIL 317
Query: 1241 AEGGCTVLMRFSRGNDQMAACGQL 1312
+ G V +R +RG+D AACGQL
Sbjct: 318 QQAGFVVTVRKTRGDDIDAACGQL 341
>sp|A1ISB3|RLMN_NEIMA Ribosomal RNA large subunit methyltransferase N
OS=Neisseria meningitidis serogroup A GN=rlmN PE=3 SV=1
Length = 364
Score = 253 bits (644), Expect = 4e-066
Identities = 140/324 (43%), Positives = 199/324 (61%), Gaps = 6/324 (1%)
Frame = +2
Query: 350 GFRPGQAMMLWKRLYKDNIWAQDVDQLEGLNKDFKRMIGEHAEFGALSFKDVRSASDGTR 529
G +P +A + + +++ AQ+ +++ L K + + E A + +SDGTR
Sbjct: 21 GEKPFRAKQVMRWMHQSG--AQNFNEMTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTR 78
Query: 530 KILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQ 709
K L + G +ETV IP + R T+C+SSQVGCA+ C FC TGR G RNLTAAEI+ Q
Sbjct: 79 KWLLDVGTGNGVETVFIP-ESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQ 137
Query: 710 AVYARRLLS---HEVGSITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVST 880
+A + + I+NVV MGMGEP N +NV+ A +IM+D++G S R+VTVST
Sbjct: 138 LWWANKAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVST 197
Query: 881 SGLVPQLKRFLRECNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYK 1060
SG+VPQ+ R ALAVSL+A+ DEVRN I+P+N+KY L L+ + L +
Sbjct: 198 SGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDF 257
Query: 1061 VLFEYVMLAGVNDRMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVL 1240
+ FEYVML G+ND+ + AR L+ELV +PCK NLI FNP S + + + + FR++L
Sbjct: 258 ITFEYVMLDGINDKAQHARELIELVTDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDIL 317
Query: 1241 AEGGCTVLMRFSRGNDQMAACGQL 1312
+ G V +R +RG+D AACGQL
Sbjct: 318 QQAGFVVTVRKTRGDDIDAACGQL 341
>sp|Q1H0U6|RLMN_METFK Ribosomal RNA large subunit methyltransferase N
OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875)
GN=rlmN PE=3 SV=1
Length = 362
Score = 251 bits (640), Expect = 1e-065
Identities = 146/344 (42%), Positives = 202/344 (58%), Gaps = 10/344 (2%)
Frame = +2
Query: 296 VVLKGMSYASLQEWVESHGFRPGQA--MMLWKRLYKDNIWAQDVDQLEGLNKDFKRMIGE 469
V L + A+L E+ + G +P +A MM W + D ++ + K + + +
Sbjct: 3 VNLLNFNQAALAEYFQGIGEKPFRAKQMMRWMH----HFGVSDFGEMTDIAKALREKLAK 58
Query: 470 HAEFGALSFKDVRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQF 649
A S + + DGTRK L + G +ETV IP D R T+CVSSQVGCA++C F
Sbjct: 59 EAVVAPPSVHLEQISEDGTRKWLIDVGAGNGVETVFIPED-DRGTLCVSSQVGCALDCTF 117
Query: 650 CYTGRMGLKRNLTAAEIVEQAVYARRLLSHEVGS---ITNVVFMGMGEPFHNIENVIKAA 820
C TGR G RNL+ +EI+ Q A + L + I+NVV MGMGEP N +NV+ A
Sbjct: 118 CSTGRQGFNRNLSVSEIIGQLWVANKALGRDPKGDRIISNVVMMGMGEPLANFDNVVAAM 177
Query: 821 NIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRECNCALAVSLNATTDEVRNWIMPINRKY 1000
NIM+D++ S R+VT+STSG+VP + R EC ALAVSL+A D +R+ I+PINRKY
Sbjct: 178 NIMLDDSAYGLSRRRVTLSTSGMVPAMDRLREECPVALAVSLHAPNDALRDEIVPINRKY 237
Query: 1001 KLSLLLETLREELSSMHKYKVLFEYVMLAGVNDRMEDARRLVELVQGIPCKINLIQFNPH 1180
++ L+ + L + V FEYVML GVND E AR+L+ +VQ +PCK NLI FNP
Sbjct: 238 PIAQLMAACQRYLEKAPRDFVTFEYVMLDGVNDTAEHARQLLNIVQDVPCKFNLIPFNPF 297
Query: 1181 SGSQFIPTDEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQL 1312
S + + D + +FR++L + G V R +RG D AACGQL
Sbjct: 298 PNSGYDTSKPDNIRRFRDILMQAGYVVTTRKTRGEDIDAACGQL 341
>sp|A5G209|RLMN_ACICJ Ribosomal RNA large subunit methyltransferase N
OS=Acidiphilium cryptum (strain JF-5) GN=rlmN PE=3 SV=1
Length = 390
Score = 243 bits (618), Expect = 4e-063
Identities = 138/345 (40%), Positives = 196/345 (56%), Gaps = 10/345 (2%)
Frame = +2
Query: 302 LKGMSYASLQEWVESHGFRPGQAMMLWKRLYKDNIWAQDVDQLEGLNKDFKRMIGEHAEF 481
L G+S L + G +P +A LW +Y + D + + K + + E
Sbjct: 40 LVGLSREELAAAMAEIGEQPFRAKQLWHWIYHQGV--TDFAAMANIAKPLRAKLAERFAI 97
Query: 482 GALSFKDVRSASDGTRKILFTLDDGLVIETVVIP-CDRGRTTVCVSSQVGCAMNCQFCYT 658
G ++D TRK+LF D +ETV IP R VC+SSQVGC ++C+FC+T
Sbjct: 98 GRPEVAADHLSADETRKMLFRFRDHEAVETVYIPDVTEDRGAVCLSSQVGCTLSCRFCHT 157
Query: 659 GRMGLKRNLTAAEIVEQAVYARRLLSHEVGS-------ITNVVFMGMGEPFHNIENVIKA 817
G L RNL+AAEIV Q + R ++ +V MGMGEP +N ENV KA
Sbjct: 158 GTQRLTRNLSAAEIVGQFMAMRDAYGEWPSPKGETPRLLSTIVLMGMGEPLYNYENVAKA 217
Query: 818 ANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRECNCALAVSLNATTDEVRNWIMPINRK 997
I++D G+ S R++T+STSG+VP + R E LAVSL+A TD+VR+ I+P+NRK
Sbjct: 218 MKIVMDGEGIGLSRRRITLSTSGVVPMMDRAGAELGVNLAVSLHAVTDDVRDVIVPLNRK 277
Query: 998 YKLSLLLETLREELSSMHKYKVLFEYVMLAGVNDRMEDARRLVELVQGIPCKINLIQFNP 1177
Y ++ L+ R + + ++ FEYVML G+ND DARRLVEL+ GIP K+NLI FNP
Sbjct: 278 YNIAELIAACRRYPGASNARRITFEYVMLKGINDSEADARRLVELIDGIPAKVNLIPFNP 337
Query: 1178 HSGSQFIPTDEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQL 1312
GS + + + + +F N++ + G +R RG D +AACGQL
Sbjct: 338 WPGSTYETSSGNAIRRFANIVMDAGYAAPVRTPRGQDILAACGQL 382
>sp|Q0A989|RLMN_ALHEH Ribosomal RNA large subunit methyltransferase N
OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=rlmN PE=3 SV=1
Length = 360
Score = 227 bits (577), Expect = 2e-058
Identities = 127/321 (39%), Positives = 187/321 (58%), Gaps = 3/321 (0%)
Frame = +2
Query: 350 GFRPGQAMMLWKRLYKDNIWAQDVDQLEGLNKDFKRMIGEHAEFGALSFKDVRSASDGTR 529
G +P +A + K +++ + +++ ++K + + E + + DGTR
Sbjct: 19 GEKPFRATQVLKWVHQRRV--TGFEEMTDISKALRARLAERVALRLPEVLAEQVSEDGTR 76
Query: 530 KILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQ 709
K L +D G IETV IP D GR T+CVSSQVGCA++C FC T + G RNL+ AEI+ Q
Sbjct: 77 KWLLRVDGGQAIETVFIP-DSGRGTLCVSSQVGCALDCSFCSTAQQGFNRNLSTAEIIGQ 135
Query: 710 AVYARRLLSHEVGSITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTSGL 889
A L+ ITNVVFMGMGEP N+E VI A +M D++ S RKVT+STSG+
Sbjct: 136 YYVAYDQLTGTGEQITNVVFMGMGEPLLNLEAVIPAVRLMTDDDAYGLSKRKVTISTSGV 195
Query: 890 VPQLKRFLRECNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKVLF 1069
V L+R + + +LAVSL+A + +R+ ++PINRK+ L L+ ++ ++ +
Sbjct: 196 VTMLERMREQTDVSLAVSLHAPNNALRDELVPINRKHPLERLIPACAAYIADKPHRRITW 255
Query: 1070 EYVMLAGVNDRMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLAEG 1249
EYVML GVND+ A L L+ IP K+NLI FNP G+++ + ++++F +L
Sbjct: 256 EYVMLDGVNDQDHHAHELARLLGDIPSKVNLIPFNPFPGARYRCSPRGRILRFVRILQSH 315
Query: 1250 GCTVLMRFSRGNDQMAACGQL 1312
G T R +RG D ACGQL
Sbjct: 316 GLTATTRVTRGQDIDGACGQL 336
>sp|B1ZG98|RLMN_METPB Ribosomal RNA large subunit methyltransferase N
OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)
GN=rlmN PE=3 SV=1
Length = 425
Score = 180 bits (455), Expect = 3e-044
Identities = 94/192 (48%), Positives = 130/192 (67%), Gaps = 1/192 (0%)
Frame = +2
Query: 740 EVGS-ITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLR 916
EVG +TN+VFMGMGEP +N++ VI A +M D+ GL S R++TVSTSG+VPQ++R
Sbjct: 204 EVGRLVTNIVFMGMGEPLYNLDAVIDAIAVMSDQEGLALSRRRITVSTSGVVPQIERLGL 263
Query: 917 ECNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKVLFEYVMLAGVN 1096
E N LA+SL+A DE+R+ ++P+NRKY ++ LLE R + ++ FEYVML GVN
Sbjct: 264 EANAMLAISLHAVRDELRDELVPLNRKYPIAQLLEACRNYPGLSNARRITFEYVMLKGVN 323
Query: 1097 DRMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLAEGGCTVLMRFS 1276
D DAR LV L++GIP KINLI FNP GS++ +D +++ +F + G +R
Sbjct: 324 DSDADARALVRLLKGIPAKINLIPFNPWPGSKYECSDWERIERFSEFVFNAGYASPVRTP 383
Query: 1277 RGNDQMAACGQL 1312
RG D +AACGQL
Sbjct: 384 RGRDILAACGQL 395
>sp|B1M1U6|RLMN_METRJ Ribosomal RNA large subunit methyltransferase N
OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM
2831) GN=rlmN PE=3 SV=2
Length = 424
Score = 179 bits (454), Expect = 4e-044
Identities = 92/194 (47%), Positives = 130/194 (67%), Gaps = 1/194 (0%)
Frame = +2
Query: 734 SHEVGS-ITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRF 910
S EVG +TN+VFMGMGEP +N++ V+ A +M D+ GL S R++TVSTSG+VPQ+ R
Sbjct: 201 SGEVGRLVTNIVFMGMGEPLYNLDAVVDAVGVMSDQEGLGLSRRRITVSTSGVVPQIPRL 260
Query: 911 LRECNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKVLFEYVMLAG 1090
+ N LA+SL+A D++R+ ++P+NRKY ++ LL R + ++ FEYVML G
Sbjct: 261 GEQANAMLAISLHAVRDDLRDELVPLNRKYPIAELLAACRAYPGLSNARRITFEYVMLKG 320
Query: 1091 VNDRMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLAEGGCTVLMR 1270
VND DAR LV L++GIP KINLI FNP GS++ +D D++ +F ++ G +R
Sbjct: 321 VNDSDADARELVRLLKGIPAKINLIPFNPWPGSRYECSDWDRIERFSEIVFNAGYASPVR 380
Query: 1271 FSRGNDQMAACGQL 1312
RG D +AACGQL
Sbjct: 381 TPRGRDILAACGQL 394
>sp|A8LNF0|RLMN_DINSH Ribosomal RNA large subunit methyltransferase N
OS=Dinoroseobacter shibae (strain DFL 12) GN=rlmN PE=3 SV=2
Length = 394
Score = 179 bits (453), Expect = 6e-044
Identities = 89/192 (46%), Positives = 130/192 (67%)
Frame = +2
Query: 737 HEVGSITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLR 916
+E ++N+V MGMGEP +N E V A I +D G+ S R++T+STSG+VP++ R
Sbjct: 182 NETRLLSNIVLMGMGEPLYNFEAVRDAMKIAMDPEGISLSRRRITLSTSGVVPEIARTAE 241
Query: 917 ECNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKVLFEYVMLAGVN 1096
E C LAVS +ATTDEVR+ ++PIN+++ ++ LL+ LR+ + + ++ FEYVML GVN
Sbjct: 242 EIGCMLAVSFHATTDEVRDKLVPINKRWNIATLLDALRDYPKASNSERITFEYVMLKGVN 301
Query: 1097 DRMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLAEGGCTVLMRFS 1276
D EDARRLVEL++GIP KINLI FN G+ + + +++ F +++ + G +R
Sbjct: 302 DSDEDARRLVELIKGIPAKINLIPFNEWPGAPYERSSNNRIRAFADIIYKAGYASPIRTP 361
Query: 1277 RGNDQMAACGQL 1312
RG D MAACGQL
Sbjct: 362 RGEDIMAACGQL 373
>sp|A9W383|RLMN_METEP Ribosomal RNA large subunit methyltransferase N
OS=Methylobacterium extorquens (strain PA1) GN=rlmN PE=3 SV=1
Length = 425
Score = 179 bits (453), Expect = 6e-044
Identities = 90/187 (48%), Positives = 128/187 (68%)
Frame = +2
Query: 752 ITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRECNCA 931
+TN+VFMGMGEP +N++ VI A +M D+ GL S R++TVSTSG+VPQ++R E N
Sbjct: 209 VTNIVFMGMGEPLYNLDAVIDAIAVMSDQEGLALSRRRITVSTSGVVPQMERLGLEANAM 268
Query: 932 LAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKVLFEYVMLAGVNDRMED 1111
LA+SL+A DE+R+ ++P+NRKY ++ LL+ R + ++ FEYVML GVND D
Sbjct: 269 LAISLHAVRDELRDELVPLNRKYPIAQLLDACRNYPGLSNARRITFEYVMLKGVNDSDAD 328
Query: 1112 ARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLAEGGCTVLMRFSRGNDQ 1291
AR LV L++GIP KINLI FNP GS++ +D +++ +F ++ G +R RG D
Sbjct: 329 ARALVRLLKGIPAKINLIPFNPWPGSKYECSDWERIERFSEIVFTAGYASPVRTPRGRDI 388
Query: 1292 MAACGQL 1312
+AACGQL
Sbjct: 389 LAACGQL 395
>sp|B0UQR1|RLMN_METS4 Ribosomal RNA large subunit methyltransferase N
OS=Methylobacterium sp. (strain 4-46) GN=rlmN PE=3 SV=1
Length = 431
Score = 178 bits (450), Expect = 1e-043
Identities = 87/187 (46%), Positives = 126/187 (67%)
Frame = +2
Query: 752 ITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRECNCA 931
++N+VFMGMGEP +N++NV+ A +M D GL S R++TVSTSG+VPQ +R + N
Sbjct: 214 VSNIVFMGMGEPLYNVDNVVDAVGVMSDNEGLGLSRRRITVSTSGVVPQFERLGIDANAM 273
Query: 932 LAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKVLFEYVMLAGVNDRMED 1111
LA+SL+A D++R+ ++P+NRKY + LLE R + ++ FEYVML GVND +
Sbjct: 274 LAISLHAVRDDLRDELVPLNRKYPIRTLLEACRNYPGVSNARRITFEYVMLKGVNDSDSE 333
Query: 1112 ARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLAEGGCTVLMRFSRGNDQ 1291
AR LV L++GIP KINLI FNP GS++ +D +++ +F ++ G +R RG D
Sbjct: 334 ARELVRLLKGIPAKINLIPFNPWPGSRYECSDWERIERFSEIVFNAGYASPVRTPRGRDI 393
Query: 1292 MAACGQL 1312
+AACGQL
Sbjct: 394 LAACGQL 400
>sp|A7HSW7|RLMN_PARL1 Ribosomal RNA large subunit methyltransferase N
OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
GN=rlmN PE=3 SV=1
Length = 399
Score = 178 bits (449), Expect = 2e-043
Identities = 91/187 (48%), Positives = 124/187 (66%)
Frame = +2
Query: 752 ITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRECNCA 931
ITN+V MGMGEP +N ENV A ++ D GL S R++T+STSG+VP ++R E C
Sbjct: 189 ITNIVMMGMGEPLYNFENVRDALEVVSDGEGLSLSKRRITLSTSGVVPMIERAGEEIGCM 248
Query: 932 LAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKVLFEYVMLAGVNDRMED 1111
LA+SL+A DE RN ++P+N+KY ++ LLE R + ++ FEYVML GVND +ED
Sbjct: 249 LAISLHAVDDETRNRLVPLNKKYPIAELLEACRNYPGVSNARRITFEYVMLKGVNDSLED 308
Query: 1112 ARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLAEGGCTVLMRFSRGNDQ 1291
A+ LV L++ IP KINLI FNP GS + +D +++ KF +V+ G +R RG D
Sbjct: 309 AKALVRLLKHIPAKINLIPFNPWPGSPYECSDWEQIEKFADVVNRAGYASPVRTPRGRDI 368
Query: 1292 MAACGQL 1312
MAACGQL
Sbjct: 369 MAACGQL 375
>sp|Q16DM2|RLMN_ROSDO Ribosomal RNA large subunit methyltransferase N
OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=rlmN PE=3
SV=1
Length = 394
Score = 177 bits (448), Expect = 2e-043
Identities = 89/191 (46%), Positives = 127/191 (66%)
Frame = +2
Query: 740 EVGSITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRE 919
E ++N+V MGMGEP +N ENV A I +D G+ S R++T+STSG+VP++ R E
Sbjct: 181 ETRLLSNIVLMGMGEPLYNFENVRDAMKIAMDPEGIQLSRRRITLSTSGVVPEIARTAVE 240
Query: 920 CNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKVLFEYVMLAGVND 1099
C LAVS +ATTD+VR+ ++PIN+++ + +LLE LR + ++ FEYVML GVND
Sbjct: 241 IGCQLAVSFHATTDDVRDTLVPINKRWNIEVLLEALRAYPKVSNSERITFEYVMLHGVND 300
Query: 1100 RMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLAEGGCTVLMRFSR 1279
EDARRLV+L+ GIP KINLI FN G+ + + +++ F +++ + G +R R
Sbjct: 301 SDEDARRLVKLIDGIPAKINLIPFNEWPGAPYKRSSNNRIRAFADIIYKAGYASPIRTPR 360
Query: 1280 GNDQMAACGQL 1312
G D MAACGQL
Sbjct: 361 GEDIMAACGQL 371
>sp|B8EIR0|RLMN_METSB Ribosomal RNA large subunit methyltransferase N
OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906)
GN=rlmN PE=3 SV=1
Length = 399
Score = 176 bits (446), Expect = 4e-043
Identities = 84/187 (44%), Positives = 128/187 (68%)
Frame = +2
Query: 752 ITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRECNCA 931
+TN+VFMGMGEP +N++NV+ A +++ D +GL S R++TVST+G+VP+L +
Sbjct: 196 VTNIVFMGMGEPLYNLDNVVDAVSVLSDGDGLSLSRRRITVSTAGVVPKLPELGEKTGAM 255
Query: 932 LAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKVLFEYVMLAGVNDRMED 1111
LA+SL+A DE+RN ++P+N+KY ++ LL+ R+ + + ++ FEYVML G+ND D
Sbjct: 256 LAISLHAVRDELRNTLVPLNKKYPIAALLQACRDYPGASNARRITFEYVMLKGINDSPSD 315
Query: 1112 ARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLAEGGCTVLMRFSRGNDQ 1291
AR LV L++GIP KINLI FNP G+ + +D+ + KF +++ G +R RG D
Sbjct: 316 ARELVRLLKGIPAKINLIPFNPWPGTAYECSDDAVIEKFSDIVFNAGYASPVRTPRGRDI 375
Query: 1292 MAACGQL 1312
+AACGQL
Sbjct: 376 LAACGQL 382
>sp|A1B4Z8|RLMN_PARDP Ribosomal RNA large subunit methyltransferase N
OS=Paracoccus denitrificans (strain Pd 1222) GN=rlmN PE=3 SV=1
Length = 391
Score = 176 bits (446), Expect = 4e-043
Identities = 88/191 (46%), Positives = 126/191 (65%)
Frame = +2
Query: 740 EVGSITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRE 919
E ++NVV MGMGEP +N +NV A +++D G+ S R++T+STSG+VP++ + E
Sbjct: 181 ETRLVSNVVLMGMGEPLYNFDNVRDAMKVVMDGEGISLSRRRITLSTSGIVPEIAKTAEE 240
Query: 920 CNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKVLFEYVMLAGVND 1099
C LAVS +ATTDE R+ ++P+NRK+ + LL LRE + ++ FEYVML GVND
Sbjct: 241 IGCLLAVSFHATTDETRDKLVPVNRKWNIETLLNALREYPRLSNSERITFEYVMLDGVND 300
Query: 1100 RMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLAEGGCTVLMRFSR 1279
EDARRLV L++GIP K+NLI FN GS + + +++ F +++ + G +R R
Sbjct: 301 SDEDARRLVRLIRGIPAKVNLIPFNEWPGSPYRRSGWERIEAFADIVHKAGYASPIRTPR 360
Query: 1280 GNDQMAACGQL 1312
G D MAACGQL
Sbjct: 361 GEDIMAACGQL 371
>sp|Q3SL73|RLMN_THIDA Ribosomal RNA large subunit methyltransferase N
OS=Thiobacillus denitrificans (strain ATCC 25259) GN=rlmN PE=3 SV=1
Length = 372
Score = 176 bits (445), Expect = 5e-043
Identities = 93/187 (49%), Positives = 120/187 (64%)
Frame = +2
Query: 752 ITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRECNCA 931
+TNVV MGMGEP N ENV+ A +M+D++ S R+VTVSTSGLVP + R C A
Sbjct: 166 VTNVVMMGMGEPLANFENVVTALGVMLDDHAYGLSRRRVTVSTSGLVPAMDRLAERCPVA 225
Query: 932 LAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKVLFEYVMLAGVNDRMED 1111
LAVSL+A D +R+ I+PINRKY L+ L+ R L + + FEYVMLAGVND+ E
Sbjct: 226 LAVSLHAPNDALRDQIVPINRKYPLAELMAACRRYLVHAPRDFITFEYVMLAGVNDQPEH 285
Query: 1112 ARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLAEGGCTVLMRFSRGNDQ 1291
AR+L+ L + +PCK NLI FNP S + + M FR +L + G V R +RG+D
Sbjct: 286 ARQLIALTRDVPCKFNLIPFNPFPDSGYEKPRAEAMRVFREILQDAGYVVTTRKTRGDDI 345
Query: 1292 MAACGQL 1312
AACGQL
Sbjct: 346 DAACGQL 352
>sp|A3PFQ4|RLMN_RHOS1 Ribosomal RNA large subunit methyltransferase N
OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=rlmN PE=3
SV=1
Length = 392
Score = 176 bits (444), Expect = 6e-043
Identities = 87/191 (45%), Positives = 128/191 (67%)
Frame = +2
Query: 740 EVGSITNVVFMGMGEPFHNIENVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRE 919
E ++N+V MGMGEP +N ENV A +++D GL S R++T+STSG+VP++ R E
Sbjct: 182 ETRLVSNLVLMGMGEPLYNFENVRNAMKVVMDGEGLSLSRRRITLSTSGVVPEIARTAEE 241
Query: 920 CNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREELSSMHKYKVLFEYVMLAGVND 1099
C LA+S +ATTDEVR+ ++PIN+++ + LL++LR+ + ++ FEYVML GVND
Sbjct: 242 IGCQLAISFHATTDEVRDILVPINKRWNIRTLLDSLRDYPRLSNSERITFEYVMLDGVND 301
Query: 1100 RMEDARRLVELVQGIPCKINLIQFNPHSGSQFIPTDEDKMIKFRNVLAEGGCTVLMRFSR 1279
DARRLV+L+ GIP KINLI FN G+ + + +++ F +++ + G +R R
Sbjct: 302 TDADARRLVKLISGIPSKINLIPFNEWPGAPYRRSTPERIAAFADIIYKAGYASPIRTPR 361
Query: 1280 GNDQMAACGQL 1312
G D MAACGQL
Sbjct: 362 GEDIMAACGQL 372
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,872,592,117
Number of Sequences: 518415
Number of Extensions: 81872592117
Number of Successful Extensions: 541474699
Number of sequences better than 0.0: 0
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