BLASTX 7.6.2
Query= UN19844 /QuerySize=946
(945 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G20290.1 | Symbols: | 40S ribosomal protein S... 408 3e-114
TAIR9_protein||AT5G59240.1 | Symbols: | 40S ribosomal protein S... 245 5e-065
>TAIR9_protein||AT5G20290.1 | Symbols: | 40S ribosomal protein S8 (RPS8A) |
chr5:6851695-6853012 REVERSE
Length = 223
Score = 408 bits (1047), Expect = 3e-114
Identities = 207/229 (90%), Positives = 214/229 (93%), Gaps = 6/229 (2%)
Frame = +3
Query: 75 MGISRDSIHKRRATGGKQKGWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 254
MGISRDSIHKRRATGGKQK WRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 255 LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLQHYGV 434
LDTGNYSWGSEA TRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61 LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120
Query: 435 EVGRKKKNAASAAKKETEDGEEAAPAAAAAAAPEEVKKSNHVLRKIESRQEGRSLDSHIE 614
E+GRKKK +AS+ KK+ E+GEE AA AAPEEVKKSNH+LRKI SRQEGRSLDSHIE
Sbjct: 121 ELGRKKK-SASSTKKDGEEGEE-----AAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIE 174
Query: 615 EQFASGRLLACISSRPGQCGRADGYILEGKELEFYQKKIQKKKGKGAA* 761
+QFASGRLLACISSRPGQCGRADGYILEGKELEFY KKIQKKKGKGAA*
Sbjct: 175 DQFASGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA* 223
>TAIR9_protein||AT5G59240.1 | Symbols: | 40S ribosomal protein S8 (RPS8B) |
chr5:23902626-23903670 REVERSE
Length = 211
Score = 245 bits (623), Expect = 5e-065
Identities = 119/130 (91%), Positives = 125/130 (96%)
Frame = +3
Query: 75 MGISRDSIHKRRATGGKQKGWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 254
MGISRDSIHKRRATGGKQK WRKKRKYE+GRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 255 LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLQHYGV 434
LDTGN+SWGSEAVTRKTR+LDV YNASNNELVRT+TLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61 LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120
Query: 435 EVGRKKKNAA 464
++GRKKK A
Sbjct: 121 DIGRKKKGEA 130
Score = 138 bits (345), Expect = 9e-033
Identities = 65/78 (83%), Positives = 71/78 (91%)
Frame = +3
Query: 522 AAAPEEVKKSNHVLRKIESRQEGRSLDSHIEEQFASGRLLACISSRPGQCGRADGYILEG 701
A EEVKKSNHV RK+E RQEGR+LDSH+EEQF+SGRLLACI+SRPGQCGRADGYILEG
Sbjct: 130 AVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYILEG 189
Query: 702 KELEFYQKKIQKKKGKGA 755
KELEFY KK+QKKKGK A
Sbjct: 190 KELEFYMKKLQKKKGKNA 207
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,282,326,151
Number of Sequences: 33410
Number of Extensions: 10282326151
Number of Successful Extensions: 343552827
Number of sequences better than 0.0: 0
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