BLASTX 7.6.2
Query= UN19853 /QuerySize=1246
(1245 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | C... 702 1e-202
TAIR9_protein||AT5G03340.1 | Symbols: | cell division cycle pro... 657 6e-189
TAIR9_protein||AT3G53230.1 | Symbols: | cell division cycle pro... 619 1e-177
TAIR9_protein||AT3G56690.1 | Symbols: CIP111 | CIP111 (CAM INTER... 263 3e-070
TAIR9_protein||AT1G03000.1 | Symbols: PEX6 | PEX6 (PEROXIN 6); A... 244 1e-064
TAIR9_protein||AT3G01610.1 | Symbols: CDC48C, emb1354 | CDC48C; ... 238 9e-063
TAIR9_protein||AT2G03670.1 | Symbols: CDC48B | CDC48B; ATP bindi... 236 3e-062
TAIR9_protein||AT5G08470.1 | Symbols: PEX1 | PEX1 (peroxisome 1)... 215 6e-056
TAIR9_protein||AT5G19990.1 | Symbols: RPT6A, ATSUG1 | RPT6A (REG... 208 1e-053
TAIR9_protein||AT5G20000.1 | Symbols: | 26S proteasome AAA-ATPa... 208 1e-053
TAIR9_protein||AT1G53750.1 | Symbols: RPT1A | RPT1A (REGULATORY ... 206 4e-053
TAIR9_protein||AT1G45000.1 | Symbols: | 26S proteasome regulato... 201 9e-052
TAIR9_protein||AT5G43010.1 | Symbols: RPT4A | RPT4A; ATPase | ch... 201 1e-051
TAIR9_protein||AT1G53780.1 | Symbols: | ATP binding / ATPase/ h... 199 5e-051
TAIR9_protein||AT5G58290.1 | Symbols: RPT3 | RPT3 (REGULATORY PA... 196 4e-050
TAIR9_protein||AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | RPT5A (RE... 193 3e-049
TAIR9_protein||AT1G09100.1 | Symbols: RPT5B | RPT5B (26S proteas... 188 1e-047
>TAIR9_protein||AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | CDC48 (CELL
DIVISION CYCLE 48); ATPase/ identical protein binding |
chr3:3019494-3022832 FORWARD
Length = 810
Score = 702 bits (1811), Expect = 1e-202
Identities = 351/360 (97%), Positives = 353/360 (98%)
Frame = +3
Query: 3 TNEHFHTALGNSNPSALRETVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFG 182
TNEHFHTALGNSNPSALRETVVEVPNVSW+DIG LENVKRELQETVQYPVEHPEKFEKFG
Sbjct: 451 TNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFG 510
Query: 183 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 362
MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR
Sbjct: 511 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 570
Query: 363 QSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP 542
QSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP
Sbjct: 571 QSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP 630
Query: 543 DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGAD 722
DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDI ALAKYTQGFSGAD
Sbjct: 631 DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGAD 690
Query: 723 ITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRS 902
ITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRS
Sbjct: 691 ITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRS 750
Query: 903 VSDADIRKYQAFAQTLQQSRGFGSEFRFETNAGSGVTTGVADPFATSAAATADDDDLYN* 1082
VSDADIRKYQAFAQTLQQSRGFGSEFRFE +AGSG TTGVADPFATSAAA DDDDLYN*
Sbjct: 751 VSDADIRKYQAFAQTLQQSRGFGSEFRFENSAGSGATTGVADPFATSAAAAGDDDDLYN* 810
Score = 207 bits (525), Expect = 2e-053
Identities = 103/253 (40%), Positives = 162/253 (64%), Gaps = 5/253 (1%)
Frame = +3
Query: 54 RETVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 233
RE + +V +DD+G + +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GK
Sbjct: 195 REDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 254
Query: 234 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 413
TL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A ++AP ++F DE+DSIA
Sbjct: 255 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 314
Query: 414 QRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLI 593
+R G R+++QLLT MDG+ ++ V ++GATNRP+ ID AL R GR D+ I
Sbjct: 315 KR----EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREI 370
Query: 594 YIPLPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGADITEICQRACKYAIRENI 773
I +PDE RL + + + +A+DVD+ ++K T G+ GAD+ +C A IRE +
Sbjct: 371 DIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKM 430
Query: 774 EK-DIEKEKRRSE 809
+ D+E + +E
Sbjct: 431 DVIDLEDDSIDAE 443
>TAIR9_protein||AT5G03340.1 | Symbols: | cell division cycle protein 48,
putative / CDC48, putative | chr5:810091-813133 REVERSE
Length = 811
Score = 657 bits (1693), Expect = 6e-189
Identities = 336/363 (92%), Positives = 346/363 (95%), Gaps = 5/363 (1%)
Frame = +3
Query: 3 TNEHFHTALGNSNPSALRETVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFG 182
+NEHFHTALGNSNPSALRETVVEVPNVSW+DIG LENVKRELQETVQYPVEHPEKFEKFG
Sbjct: 451 SNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFG 510
Query: 183 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 362
MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR
Sbjct: 511 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 570
Query: 363 QSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP 542
QSAPCVLFFDELDSIATQR G S GD GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP
Sbjct: 571 QSAPCVLFFDELDSIATQR-GNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP 629
Query: 543 DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGAD 722
DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKA LRKSP+AKDVD+ ALAKYTQGFSGAD
Sbjct: 630 DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGAD 689
Query: 723 ITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGV-DEVSEIKAAHFEESMKYARR 899
ITEICQRACKYAIRENIEKDIE E+RRS+NPEAMEED V DEVSEI+AAHFEESMKYARR
Sbjct: 690 ITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARR 749
Query: 900 SVSDADIRKYQAFAQTLQQSRGFGSEFRFETNAGSGVTTGV--ADPFATSAAATADDDDL 1073
SVSDADIRKYQAFAQTLQQSRGFGSEFRF++ AG G TTGV ADPFATSAAA ADDDDL
Sbjct: 750 SVSDADIRKYQAFAQTLQQSRGFGSEFRFDSTAGVGRTTGVAAADPFATSAAA-ADDDDL 808
Query: 1074 YN* 1082
Y+*
Sbjct: 809 YS* 811
Score = 206 bits (524), Expect = 2e-053
Identities = 103/253 (40%), Positives = 161/253 (63%), Gaps = 5/253 (1%)
Frame = +3
Query: 54 RETVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 233
RE + V +DD+G + +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GK
Sbjct: 195 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 254
Query: 234 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 413
TL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A ++AP ++F DE+DSIA
Sbjct: 255 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 314
Query: 414 QRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLI 593
+R G R+++QLLT MDG+ ++ V ++GATNRP+ ID AL R GR D+ I
Sbjct: 315 KR----EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREI 370
Query: 594 YIPLPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGADITEICQRACKYAIRENI 773
I +PDE RL + + + +A+DVD+ ++K T G+ GAD+ +C A IRE +
Sbjct: 371 DIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKM 430
Query: 774 EK-DIEKEKRRSE 809
+ D+E + +E
Sbjct: 431 DVIDLEDDSIDAE 443
>TAIR9_protein||AT3G53230.1 | Symbols: | cell division cycle protein 48,
putative / CDC48, putative | chr3:19723416-19726489 FORWARD
Length = 816
Score = 619 bits (1596), Expect = 1e-177
Identities = 317/368 (86%), Positives = 335/368 (91%), Gaps = 11/368 (2%)
Frame = +3
Query: 3 TNEHFHTALGNSNPSALRETVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFG 182
+N+HF TALGNSNPSALRETVVEVPNVSW+DIG LENVKRELQETVQYPVEHPEKFEKFG
Sbjct: 452 SNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFG 511
Query: 183 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 362
MSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKAR
Sbjct: 512 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 571
Query: 363 QSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP 542
QSAPCVLFFDELDSIATQR G S GD GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP
Sbjct: 572 QSAPCVLFFDELDSIATQR-GNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP 630
Query: 543 DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGAD 722
DIID ALLRPGRLDQLIYIPLPDE+SR IFK+ LRKSP+AKDVD+ ALAKYTQGFSGAD
Sbjct: 631 DIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGAD 690
Query: 723 ITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRS 902
ITEICQR+CKYAIRENIEKDIEKE++R+E+PEAMEED +E++EIKA HFEESMKYARRS
Sbjct: 691 ITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEED-EEEIAEIKAGHFEESMKYARRS 749
Query: 903 VSDADIRKYQAFAQTLQQSRGFGSEFRF------ETNA--GSGVTTGVADPFATSAAATA 1058
VSDADIRKYQAFAQTLQQSRGFGSEFRF T A G+ T G DPFATS A A
Sbjct: 750 VSDADIRKYQAFAQTLQQSRGFGSEFRFPDAPTGTTGAFPGAAATVGGVDPFATSGGA-A 808
Query: 1059 DDDDLYN* 1082
DDDDLY+*
Sbjct: 809 DDDDLYS* 816
Score = 206 bits (523), Expect = 3e-053
Identities = 106/263 (40%), Positives = 166/263 (63%), Gaps = 7/263 (2%)
Frame = +3
Query: 54 RETVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 233
RE + V +DD+G + +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GK
Sbjct: 196 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
Query: 234 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 413
TL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A ++AP ++F DE+DSIA
Sbjct: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
Query: 414 QRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLI 593
+R G R+++QLLT MDG+ ++ V ++GATNRP+ ID AL R GR D+ I
Sbjct: 316 KR----EKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREI 371
Query: 594 YIPLPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGADITEICQRACKYAIRENI 773
I +PDE RL + + + +A+DVD+ ++K T G+ GAD+ +C A IRE +
Sbjct: 372 DIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKM 431
Query: 774 EK-DIEKEKRRSE--NPEAMEED 833
+ D++ E+ +E N A+ D
Sbjct: 432 DVIDLDDEEIDAEILNSMAVSND 454
>TAIR9_protein||AT3G56690.1 | Symbols: CIP111 | CIP111 (CAM INTERACTING PROTEIN
111); ATPase/ calmodulin binding | chr3:20993869-20998531 REVERSE
Length = 1023
Score = 263 bits (670), Expect = 3e-070
Identities = 125/258 (48%), Positives = 179/258 (69%), Gaps = 2/258 (0%)
Frame = +3
Query: 9 EHFHTALGNSNPSALRETVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMS 188
E F A PSA+RE ++EVP V+W+D+G VK +L E V++P +H + F++ G
Sbjct: 697 EDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTR 756
Query: 189 PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQS 368
P G+L +GPPGC KTL+A+A+A+E + NF++VKGPEL + W GESE VR +F KAR +
Sbjct: 757 PPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 816
Query: 369 APCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDI 548
AP ++FFDE+DS+A+ R G DG +DRV++QLL E+DG++ + V +I ATNRPD
Sbjct: 817 APSIIFFDEIDSLASIR--GKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDK 874
Query: 549 IDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGADIT 728
IDSALLRPGR D+L+Y+ P+E R I K LRK P + D+ + LA T+G++GADI+
Sbjct: 875 IDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTGADIS 934
Query: 729 EICQRACKYAIRENIEKD 782
IC+ A A+ E++E +
Sbjct: 935 LICREAAIAALEESLEME 952
>TAIR9_protein||AT1G03000.1 | Symbols: PEX6 | PEX6 (PEROXIN 6); ATP binding /
ATPase/ nucleoside-triphosphatase/ nucleotide binding |
chr1:688057-692453 REVERSE
Length = 942
Score = 244 bits (621), Expect = 1e-064
Identities = 133/263 (50%), Positives = 178/263 (67%), Gaps = 11/263 (4%)
Frame = +3
Query: 9 EHFHTALGNS---NPSALRETVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKF 179
E F AL S N SAL +VPNV WDD+G LE+VK + +TVQ P+ H + F
Sbjct: 630 EDFTKALDRSKKRNASAL--GAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSS- 686
Query: 180 GMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKA 359
G+ GVL YGPPG GKTLLAKA+A EC NF+SVKGPEL+ M+ GESE NVR+IF+KA
Sbjct: 687 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKA 746
Query: 360 RQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGM-NAKKTVFIIGATN 536
R + PCV+FFDELDS+A R G+ GD GG DRV++Q+L E+DG+ ++ + +FIIGA+N
Sbjct: 747 RSARPCVIFFDELDSLAPAR--GASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASN 804
Query: 537 RPDIIDSALLRPGRLDQLIYIPL-PDEDSRLNIFKAALRKSPIAKDVDINALAKYTQG-F 710
RPD+ID ALLRPGR D+L+Y+ + D R + KA RK +++DV + ++AK F
Sbjct: 805 RPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTF 864
Query: 711 SGADITEICQRACKYAIRENIEK 779
+GAD+ +C A A + + K
Sbjct: 865 TGADMYALCADAWFQAAKRKVSK 887
>TAIR9_protein||AT3G01610.1 | Symbols: CDC48C, emb1354 | CDC48C; ATP binding /
ATPase/ nucleoside-triphosphatase/ nucleotide binding |
chr3:231787-235057 FORWARD
Length = 821
Score = 238 bits (605), Expect = 9e-063
Identities = 117/254 (46%), Positives = 165/254 (64%), Gaps = 6/254 (2%)
Frame = +3
Query: 15 FHTALGNSNPSALRETVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPS 194
F A+ S RE VP+V WDD+G L++++ + + P++ P+ ++ FG+
Sbjct: 503 FEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLE 562
Query: 195 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 374
G L YGPPGCGKTL+AKA ANE ANF+ +KG ELL + GESE +R +F +AR AP
Sbjct: 563 TGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAP 622
Query: 375 CVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIID 554
CV+FFDE+D++ T R G +G +R+LNQ L E+DG ++ V++IGATNRPD++D
Sbjct: 623 CVIFFDEVDALTTSR----GKEGAWVVERLLNQFLVELDG-GERRNVYVIGATNRPDVVD 677
Query: 555 SALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDINALAKYT-QGFSGADITE 731
A LRPGR L+Y+PLP+ D R +I KA RK PI VD++ +AK +GFSGAD+
Sbjct: 678 PAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAH 737
Query: 732 ICQRACKYAIRENI 773
+ Q+A A+ E I
Sbjct: 738 LVQKATFQAVEEMI 751
>TAIR9_protein||AT2G03670.1 | Symbols: CDC48B | CDC48B; ATP binding / ATPase/
nucleoside-triphosphatase/ nucleotide binding | chr2:1117595-1120361
FORWARD
Length = 604
Score = 236 bits (601), Expect = 3e-062
Identities = 110/257 (42%), Positives = 169/257 (65%)
Frame = +3
Query: 3 TNEHFHTALGNSNPSALRETVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFG 182
T++ F A PS R VE+P V+WDD+G L+++K++LQ+ V++P++H F K G
Sbjct: 257 TSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMG 316
Query: 183 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 362
+SP +G+L +GPPGC KT LAKA AN QA+F S+ EL +M+ GE EA +R F +AR
Sbjct: 317 ISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRAR 376
Query: 363 QSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP 542
++P ++FFDE D +A +RG S + +R+L+ LLTEMDG+ K + ++ ATNRP
Sbjct: 377 LASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRP 436
Query: 543 DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGAD 722
ID+AL+RPGR D ++Y+P PD ++R I + R + DVD+ +A+ T F+GA+
Sbjct: 437 YAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAE 496
Query: 723 ITEICQRACKYAIRENI 773
+ +C+ + ++RENI
Sbjct: 497 LEGLCRESGTVSLRENI 513
>TAIR9_protein||AT5G08470.1 | Symbols: PEX1 | PEX1 (peroxisome 1); ATP binding /
ATPase/ binding / nucleoside-triphosphatase/ nucleotide binding /
protein binding | chr5:2735925-2742731 FORWARD
Length = 1131
Score = 215 bits (546), Expect = 6e-056
Identities = 113/263 (42%), Positives = 158/263 (60%), Gaps = 7/263 (2%)
Frame = +3
Query: 15 FHTALGNSNPSALRE---TVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGM 185
F A+ + P A+R+ + E + W+D+G + ++K ++E ++ P + P+ F K +
Sbjct: 816 FTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPL 875
Query: 186 SPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQ 365
VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+IF KA
Sbjct: 876 RLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAA 935
Query: 366 SAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPD 545
+APC+LFFDE DSIA +R G D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 936 AAPCILFFDEFDSIAPKR----GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
Query: 546 IIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGADI 725
++D ALLRPGRLD+L+ P RL I RK +A D+D+ +A T+GFSGAD+
Sbjct: 992 LLDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADL 1051
Query: 726 TEICQRACKYAIRENIEKDIEKE 794
+ A A+ E + ++ + E
Sbjct: 1052 QALLSDAQLAAVHEYLNREDKPE 1074
>TAIR9_protein||AT5G19990.1 | Symbols: RPT6A, ATSUG1 | RPT6A (REGULATORY
PARTICLE TRIPLE-A ATPASE 6A); ATPase | chr5:6752144-6754918 FORWARD
Length = 420
Score = 208 bits (527), Expect = 1e-053
Identities = 100/235 (42%), Positives = 150/235 (63%)
Frame = +3
Query: 63 VVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 242
V +VP+ ++D IG L+ +E++E ++ P++HPE FE G++ KGVL YGPPG GKTLL
Sbjct: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
Query: 243 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 422
A+A+A+ FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI + R
Sbjct: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
Query: 423 GGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIP 602
G+G R + +LL ++DG A + ++ ATNR DI+D ALLRPGR+D+ I P
Sbjct: 272 ESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 331
Query: 603 LPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGADITEICQRACKYAIRE 767
P+E+SR +I K RK + + +D+ +A+ G SGA++ +C A +A+RE
Sbjct: 332 NPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
>TAIR9_protein||AT5G20000.1 | Symbols: | 26S proteasome AAA-ATPase subunit,
putative | chr5:6756915-6759550 FORWARD
Length = 420
Score = 208 bits (527), Expect = 1e-053
Identities = 100/235 (42%), Positives = 150/235 (63%)
Frame = +3
Query: 63 VVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 242
V +VP+ ++D IG L+ +E++E ++ P++HPE FE G++ KGVL YGPPG GKTLL
Sbjct: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
Query: 243 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 422
A+A+A+ FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI + R
Sbjct: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
Query: 423 GGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIP 602
G+G R + +LL ++DG A + ++ ATNR DI+D ALLRPGR+D+ I P
Sbjct: 272 ESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 331
Query: 603 LPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGADITEICQRACKYAIRE 767
P+E+SR +I K RK + + +D+ +A+ G SGA++ +C A +A+RE
Sbjct: 332 NPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
>TAIR9_protein||AT1G53750.1 | Symbols: RPT1A | RPT1A (REGULATORY PARTICLE
TRIPLE-A 1A); ATPase | chr1:20065921-20068324 REVERSE
Length = 427
Score = 206 bits (522), Expect = 4e-053
Identities = 109/253 (43%), Positives = 153/253 (60%), Gaps = 3/253 (1%)
Frame = +3
Query: 39 NPSALRETVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 218
+PS TV E P+V+++D+G + +++E V+ P+ HPEKF K G+ P KGVL YGP
Sbjct: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
Query: 219 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 398
PG GKTLLA+A+AN A FI V G EL+ + GE VRE+F AR C++FFDE+
Sbjct: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
Query: 399 DSIATQR-GGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPG 575
D+I R G GGD R + +++ ++DG +A+ + ++ ATNRPD +D ALLRPG
Sbjct: 271 DAIGGARFDDGVGGD--NEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 328
Query: 576 RLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGADITEICQRACKY 755
RLD+ + LPD +SR IFK R +D+ LA+ +GADI +C A Y
Sbjct: 329 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMY 388
Query: 756 AIRENIEKDIEKE 794
AIR + EK+
Sbjct: 389 AIRARRKTVTEKD 401
>TAIR9_protein||AT1G45000.1 | Symbols: | 26S proteasome regulatory complex
subunit p42D, putative | chr1:17009220-17011607 FORWARD
Length = 400
Score = 201 bits (510), Expect = 9e-052
Identities = 110/256 (42%), Positives = 159/256 (62%), Gaps = 9/256 (3%)
Frame = +3
Query: 78 NVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 257
N+S+ +G L + REL+E+++ P+ +PE F + G+ P KGVL YGPPG GKTLLA+AIA
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 258 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGG 437
+ ANF+ V ++ + GES +RE+F+ AR+ PC++F DE+D+I +R G
Sbjct: 195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRR-FSEGT 253
Query: 438 DGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDED 617
R L +LL ++DG + V +I ATNRPD++D ALLRPGRLD+ I IPLP+E
Sbjct: 254 SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 313
Query: 618 SRLNIFKAALRKSPIAK--DVDINALAKYTQGFSGADITEICQRACKYAIREN----IEK 779
SR+ I K + S IAK ++D A+ K +GF+GAD+ IC A +AIR I +
Sbjct: 314 SRMEILK--IHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHE 371
Query: 780 DIEKEKRRSENPEAME 827
D K R+ + +E
Sbjct: 372 DFMKAVRKLSEAKKLE 387
>TAIR9_protein||AT5G43010.1 | Symbols: RPT4A | RPT4A; ATPase |
chr5:17248563-17251014 REVERSE
Length = 400
Score = 201 bits (509), Expect = 1e-051
Identities = 109/256 (42%), Positives = 160/256 (62%), Gaps = 9/256 (3%)
Frame = +3
Query: 78 NVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 257
N+S+ +G L + REL+E+++ P+ +PE F + G+ P KGVL YGPPG GKTLLA+AIA
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 258 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGG 437
+ ANF+ V ++ + GES +RE+F+ AR+ PC++F DE+D+I +R G
Sbjct: 195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRR-FSEGT 253
Query: 438 DGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDED 617
R L +LL ++DG + V +I ATNRPD++D ALLRPGRLD+ I IPLP+E
Sbjct: 254 SADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 313
Query: 618 SRLNIFKAALRKSPIAK--DVDINALAKYTQGFSGADITEICQRACKYAIREN----IEK 779
SR++I K + + IAK ++D A+ K +GF+GAD+ IC A +AIR I +
Sbjct: 314 SRMDILK--IHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHE 371
Query: 780 DIEKEKRRSENPEAME 827
D K R+ + +E
Sbjct: 372 DFMKAVRKLSEAKKLE 387
>TAIR9_protein||AT1G53780.1 | Symbols: | ATP binding / ATPase/ hydrolase/
nucleoside-triphosphatase/ nucleotide binding / peptidyl-prolyl
cis-trans isomerase | chr1:20074212-20077235 REVERSE
Length = 599
Score = 199 bits (504), Expect = 5e-051
Identities = 108/255 (42%), Positives = 150/255 (58%), Gaps = 7/255 (2%)
Frame = +3
Query: 39 NPSALRETVVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 218
+PS TV E P+ ++ DIG + +++E V+ P+ HPEKF + G+ P KGVL YGP
Sbjct: 322 DPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGP 381
Query: 219 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 398
PG GKTL+A+A+AN A FI V G EL+ + GE VRE+F AR C+LFFDE+
Sbjct: 382 PGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEI 441
Query: 399 DSIATQRGGGSGGDGGGA---ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLR 569
D+I GG DG G+ R + ++L ++DG +A+ + ++ ATNRPDI+D ALLR
Sbjct: 442 DAI----GGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLR 497
Query: 570 PGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGADITEICQRAC 749
PGRLD+ + LPD + R IFK R +D+ LA +GADI +C A
Sbjct: 498 PGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAG 557
Query: 750 KYAIRENIEKDIEKE 794
YAI + EK+
Sbjct: 558 MYAIGARRKSVTEKD 572
>TAIR9_protein||AT5G58290.1 | Symbols: RPT3 | RPT3 (REGULATORY PARTICLE TRIPLE-A
ATPASE 3); ATPase | chr5:23569155-23571116 FORWARD
Length = 409
Score = 196 bits (496), Expect = 4e-050
Identities = 104/248 (41%), Positives = 150/248 (60%), Gaps = 5/248 (2%)
Frame = +3
Query: 69 EVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 248
E P+VS++DIG + K+E++E V+ P+ H E +++ G+ P +GVL YGPPG GKT+LAK
Sbjct: 148 EKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAK 207
Query: 249 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGG 428
A+AN A FI V G E + + GE VR++F A+++AP ++F DE+D+IAT R
Sbjct: 208 AVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDA 267
Query: 429 SGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLP 608
G R+L +LL +MDG + V +I ATNR D +D ALLRPGRLD+ I PLP
Sbjct: 268 QTG-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 326
Query: 609 DEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGADITEICQRACKYAIREN----IE 776
D + +F+ K ++ +VD+ S A+I ICQ A +A+R+N +
Sbjct: 327 DRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILP 386
Query: 777 KDIEKEKR 800
KD EK R
Sbjct: 387 KDFEKGYR 394
>TAIR9_protein||AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | RPT5A (REGULATORY
PARTICLE TRIPLE-A ATPASE 5A); ATPase/ calmodulin binding |
chr3:1603540-1605993 FORWARD
Length = 425
Score = 193 bits (488), Expect = 3e-049
Identities = 98/236 (41%), Positives = 145/236 (61%), Gaps = 1/236 (0%)
Frame = +3
Query: 63 VVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 242
V E P ++DIG LE +EL E + P+ H E+FEK G+ P KGVL YGPPG GKTL+
Sbjct: 162 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLM 221
Query: 243 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 422
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ APC++F DE+D+I T+R
Sbjct: 222 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKR- 280
Query: 423 GGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIP 602
S G R + +LL ++DG ++ + + +I ATNR DI+D AL+R GRLD+ I P
Sbjct: 281 FDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFP 340
Query: 603 LPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGADITEICQRACKYAIREN 770
P E++R I + RK + DV+ LA+ T F+GA + +C A A+R +
Sbjct: 341 HPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 396
>TAIR9_protein||AT1G09100.1 | Symbols: RPT5B | RPT5B (26S proteasome AAA-ATPase
subunit RPT5B); ATPase/ calmodulin binding | chr1:2936675-2939258
REVERSE
Length = 424
Score = 188 bits (475), Expect = 1e-047
Identities = 97/236 (41%), Positives = 144/236 (61%), Gaps = 1/236 (0%)
Frame = +3
Query: 63 VVEVPNVSWDDIGVLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 242
V E P ++DIG LE +EL E + P+ H E+FEK G+ P KGVL YGPPG GKTL+
Sbjct: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLM 220
Query: 243 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 422
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I T+R
Sbjct: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKR- 279
Query: 423 GGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIP 602
S G R + +LL ++DG ++ + +I ATNR DI+D AL+R GRLD+ I P
Sbjct: 280 FDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFP 339
Query: 603 LPDEDSRLNIFKAALRKSPIAKDVDINALAKYTQGFSGADITEICQRACKYAIREN 770
P E++R I + RK + DV+ LA+ T F+GA + +C A A+R +
Sbjct: 340 HPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,282,326,151
Number of Sequences: 33410
Number of Extensions: 10282326151
Number of Successful Extensions: 343552827
Number of sequences better than 0.0: 0
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