BLASTX 7.6.2
Query= UN19871 /QuerySize=1222
(1221 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|B1XIZ3|NUSB_SYNP2 N utilization substance protein B homolog O... 54 2e-006
sp|Q8DKS0|NUSB_THEEB N utilization substance protein B homolog O... 54 2e-006
>sp|B1XIZ3|NUSB_SYNP2 N utilization substance protein B homolog OS=Synechococcus
sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=nusB PE=3 SV=1
Length = 213
Score = 54 bits (129), Expect = 2e-006
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Frame = +2
Query: 623 VLRFAKKLLAAVAEKWDSHVVVIEKISPPDWKSAPAGRILEFSILHLAMSEMAVLETRHP 802
V FA ++L + + D VI+ S DW+ R L+ IL +A++E+ LET +
Sbjct: 116 VRNFALEILTTLRRRNDQIKEVIDG-SLVDWQYHRLPR-LDRDILRIAVAEILFLETPYK 173
Query: 803 IVINEAVDLAKRFCDGSAPRIINGCLRTFVKDRSAA 910
+ INEAV+LAKR+ D R ING LR V DR A
Sbjct: 174 VAINEAVELAKRYSDEDGHRFINGVLRR-VSDRLRA 208
>sp|Q8DKS0|NUSB_THEEB N utilization substance protein B homolog
OS=Thermosynechococcus elongatus (strain BP-1) GN=nusB PE=3 SV=1
Length = 212
Score = 54 bits (128), Expect = 2e-006
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Frame = +2
Query: 440 EPGYEFDKASLLEYNHMSFGGPPVKTETSEEEDELVRHDENESKIEAEVLSAPPNLVYS- 616
+ G E ++ L H F P ++ +D L R ++ +KI A L P L ++
Sbjct: 52 QAGTELSESQRL-LRHSEFQLPHLEKAQMVLQDALQRAEKGLNKIGA-ALDLPEILYFAH 109
Query: 617 -KLVLRFAKKLLAAVAEKWDSHVVVIEKISPPDWKSAPAGRILEFSILHLAMSEMAVLET 793
+ V +A LL + +++ + + + S DW+ + L+ +I+ +A+ EM LE
Sbjct: 110 QEEVQAYAIALLRCL-QRYQNEIEELVNRSMVDWQLERLTQ-LDRAIIEIAVVEMRYLEV 167
Query: 794 RHPIVINEAVDLAKRFCDGSAPRIINGCLRTFVK--DRSAAAT 916
+ INEA++LAKR+ D + R ING LR + D + AAT
Sbjct: 168 AKQVAINEAIELAKRYSDEGSHRFINGVLRRISEALDPAQAAT 210
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,872,592,117
Number of Sequences: 518415
Number of Extensions: 81872592117
Number of Successful Extensions: 541474699
Number of sequences better than 0.0: 0
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