BLASTX 7.6.2

Query= UN19871 /QuerySize=1222
        (1221 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G26370.1 | Symbols:  | antitermination NusB do...    530   9e-151
TAIR9_protein||AT4G26370.2 | Symbols:  | antitermination NusB do...    304   1e-082

>TAIR9_protein||AT4G26370.1 | Symbols:  | antitermination NusB domain-containing
        protein | chr4:13334099-13336153 REVERSE

          Length = 302

 Score =  530 bits (1364), Expect = 9e-151
 Identities = 271/304 (89%), Positives = 283/304 (93%), Gaps = 9/304 (2%)
 Frame = +2

Query:  71 MEGSISPLCLRSSSSLCYFSSNLSLDSHRSLGFTFVDSLRPTNLVSLRTGNR-------R 229
           MEG+ SPLCLRSSS+LCYFSSN+S DSHRS+GFT VDSLRPTNLVSLRTGN+       R
Sbjct:   1 MEGTFSPLCLRSSSNLCYFSSNVSPDSHRSIGFTLVDSLRPTNLVSLRTGNKRSSSSSLR 60

Query: 230 LFLSPTRGALRTPTLTAEEVKDVPMPKIDKSGRLSSPRAARELALVTLYAACLEGSDPIR 409
           LFLSPTR ALRTPT++AEEVKDVPMPKIDKSGRLSSPRAARELALV LYAACLEGSDPIR
Sbjct:  61 LFLSPTRSALRTPTISAEEVKDVPMPKIDKSGRLSSPRAARELALVILYAACLEGSDPIR 120

Query: 410 LFEKRINARREPGYEFDKASLLEYNHMSFGGPPVKTETSEEEDELVRHDENESKIEAEVL 589
           LFEKRINARREPGYEFDK+SLLEYNHMSFGGPPVKTET EEEDELVRHDE ESKIEAEVL
Sbjct: 121 LFEKRINARREPGYEFDKSSLLEYNHMSFGGPPVKTETKEEEDELVRHDEKESKIEAEVL 180

Query: 590 SAPPNLVYSKLVLRFAKKLLAAVAEKWDSHVVVIEKISPPDWKSAPAGRILEFSILHLAM 769
           SAPP LVYSKLVLRFAKKLLAAV +KWDSHVV+IEKISPPDWKSAPAGRILEFSILHLAM
Sbjct: 181 SAPPKLVYSKLVLRFAKKLLAAVVDKWDSHVVIIEKISPPDWKSAPAGRILEFSILHLAM 240

Query: 770 SEMAVLETRHPIVINEAVDLAKRFCDGSAPRIINGCLRTFVKDRSAAATPTPQALKLKQE 949
           SE+AVLETRHPIVINEAVDLAKRFCDGSAPRIINGCLRTFVKDR  A T TPQAL+LKQE
Sbjct: 241 SEVAVLETRHPIVINEAVDLAKRFCDGSAPRIINGCLRTFVKDR--ATTSTPQALELKQE 298

Query: 950 VSV* 961
           VSV*
Sbjct: 299 VSV* 302

>TAIR9_protein||AT4G26370.2 | Symbols:  | antitermination NusB domain-containing
        protein | chr4:13334766-13336153 REVERSE

          Length = 249

 Score =  304 bits (776), Expect = 1e-082
 Identities = 153/175 (87%), Positives = 161/175 (92%), Gaps = 7/175 (4%)
 Frame = +2

Query:  71 MEGSISPLCLRSSSSLCYFSSNLSLDSHRSLGFTFVDSLRPTNLVSLRTGNR-------R 229
           MEG+ SPLCLRSSS+LCYFSSN+S DSHRS+GFT VDSLRPTNLVSLRTGN+       R
Sbjct:   1 MEGTFSPLCLRSSSNLCYFSSNVSPDSHRSIGFTLVDSLRPTNLVSLRTGNKRSSSSSLR 60

Query: 230 LFLSPTRGALRTPTLTAEEVKDVPMPKIDKSGRLSSPRAARELALVTLYAACLEGSDPIR 409
           LFLSPTR ALRTPT++AEEVKDVPMPKIDKSGRLSSPRAARELALV LYAACLEGSDPIR
Sbjct:  61 LFLSPTRSALRTPTISAEEVKDVPMPKIDKSGRLSSPRAARELALVILYAACLEGSDPIR 120

Query: 410 LFEKRINARREPGYEFDKASLLEYNHMSFGGPPVKTETSEEEDELVRHDENESKI 574
           LFEKRINARREPGYEFDK+SLLEYNHMSFGGPPVKTET EEEDELVRHDE ESKI
Sbjct: 121 LFEKRINARREPGYEFDKSSLLEYNHMSFGGPPVKTETKEEEDELVRHDEKESKI 175


 Score =  55 bits (131), Expect = 8e-008
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = +3

Query: 576 KQKCFQLPQIWSTANLFYGLQRNSWLQ 656
           K KCFQLPQ W TANLFYGLQRNSWL+
Sbjct: 222 KPKCFQLPQSWCTANLFYGLQRNSWLR 248

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,282,326,151
Number of Sequences: 33410
Number of Extensions: 10282326151
Number of Successful Extensions: 343552827
Number of sequences better than 0.0: 0