BLASTX 7.6.2
Query= UN19878 /QuerySize=1152
(1151 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G09760.1 | Symbols: U2A' | U2A' (U2 small nucl... 433 1e-121
TAIR9_protein||AT3G50690.1 | Symbols: | leucine-rich repeat fam... 58 1e-008
>TAIR9_protein||AT1G09760.1 | Symbols: U2A' | U2A' (U2 small nuclear
ribonucleoprotein A); protein binding | chr1:3159476-3161603 REVERSE
Length = 250
Score = 433 bits (1112), Expect = 1e-121
Identities = 224/250 (89%), Positives = 238/250 (95%), Gaps = 3/250 (1%)
Frame = -3
Query: 1083 MVKLTADLIWNSPHFFNAIKERELELRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 904
MVKLTADLIW SPHFFNAIKEREL+LRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 903 PLLNRLGTLIVNNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLASIPKLQYLSL 724
P LNRLGTL++NNNRITRINPN+GEFLPKLH+LVLTNNRLVNLVEIDPLASIPKLQYLSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLSL 120
Query: 723 LDNNITKKPNYRLYVIHKLKSLRVLDFIKVKDKERAEAAALFSSKEAEEEVKKVSQQEVQ 544
LDNNITKK NYRLYVIHKLKSLRVLDFIK+K KERAEAA+LFSSKEAEEEVKKVS++EV+
Sbjct: 121 LDNNITKKANYRLYVIHKLKSLRVLDFIKIKAKERAEAASLFSSKEAEEEVKKVSREEVK 180
Query: 543 KVSDTTEDAEAPKVVAPTQEQILAIKAAIINSQTIEEIARLEQALKFGQVPAGLIVPDPA 364
KVS+T E+ E PKVVAPT EQILAIKAAIINSQTIEEIARLEQALKFGQVPAGLI+PDPA
Sbjct: 181 KVSETAENPETPKVVAPTAEQILAIKAAIINSQTIEEIARLEQALKFGQVPAGLIIPDPA 240
Query: 363 SGVNDGSGPM 334
+ ND S PM
Sbjct: 241 T--ND-SAPM 247
>TAIR9_protein||AT3G50690.1 | Symbols: | leucine-rich repeat family protein |
chr3:18835271-18837097 REVERSE
Length = 448
Score = 58 bits (138), Expect = 1e-008
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Frame = -3
Query: 924 IVKLENFPLLNRLGTLIVNNNRIT-RINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLASI 748
+ LE FP L L LI+++NRIT + + L L L+NNR+ + ++ PLA +
Sbjct: 60 VSSLEQFPRLGNLQKLILSDNRITVGLEFLVEAGLDSFCDLDLSNNRIQFVEDLAPLAEL 119
Query: 747 PKLQYLSLLDNNITKKPNYRLYVIHKLKSLRVLDFIKVKDKERAEAAALFSSKEAEEEVK 568
KL L L + +T+ +YR V +K+L+ LD + ER E+ ++ E+E +
Sbjct: 120 -KLVSLDLYECPVTRLKDYRSRVFGLIKTLKYLDKTDAEGNERPESDDEDDEEDEEDEEE 178
Query: 567 KVSQQEVQKVS---DTTEDAEAPKVVAPTQEQILAIKAAIINSQTIEEIARLEQA 412
+ E S D E AEAP++ E++ + + ++ E EQA
Sbjct: 179 EEEGDEEDPGSGEIDGDERAEAPRMSNGHSERVDGVVDVDEDEESDAEDDESEQA 233
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,372,867,301
Number of Sequences: 33410
Number of Extensions: 10372867301
Number of Successful Extensions: 348709919
Number of sequences better than 0.0: 0
|