BLASTX 7.6.2
Query= UN19884 /QuerySize=781
(780 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30683481|ref|NP_565646.2| RNA recognition motif-containing pr... 156 3e-036
gi|297826049|ref|XP_002880907.1| RNA recognition motif-containin... 156 6e-036
gi|296084877|emb|CBI28286.3| unnamed protein product [Vitis vini... 105 9e-021
gi|255565709|ref|XP_002523844.1| Cold-inducible RNA-binding prot... 101 2e-019
gi|255631468|gb|ACU16101.1| unknown [Glycine max] 95 9e-018
gi|20197660|gb|AAM15185.1| putative RNA-binding glycine rich pro... 94 3e-017
gi|224104887|ref|XP_002313606.1| predicted protein [Populus tric... 91 2e-016
gi|15219486|ref|NP_177494.1| RNA recognition motif-containing pr... 89 5e-016
gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis] 89 8e-016
gi|224120444|ref|XP_002318331.1| predicted protein [Populus tric... 87 3e-015
gi|255579369|ref|XP_002530529.1| RNA binding protein, putative [... 87 3e-015
gi|297842099|ref|XP_002888931.1| RNA recognition motif-containin... 86 7e-015
gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica... 84 2e-014
gi|225464267|ref|XP_002271224.1| PREDICTED: hypothetical protein... 84 3e-014
gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT... 80 3e-013
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vini... 79 7e-013
gi|194699346|gb|ACF83757.1| unknown [Zea mays] 78 1e-012
gi|226510389|ref|NP_001150093.1| glycine-rich RNA-binding protei... 78 1e-012
gi|224091949|ref|XP_002309412.1| predicted protein [Populus tric... 78 1e-012
gi|255625921|gb|ACU13305.1| unknown [Glycine max] 78 1e-012
>gi|30683481|ref|NP_565646.2| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 116
Score = 156 bits (394), Expect = 3e-036
Identities = 84/113 (74%), Positives = 96/113 (84%), Gaps = 3/113 (2%)
Frame = +1
Query: 22 SHLLNRSPNPSLVFSRTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVRCR 201
+ L RS P L+FSR+FSS TLFVKGISFSSTEETLTQAFSQYG+VL V+V+MDK+RCR
Sbjct: 3 TQFLYRSFTP-LLFSRSFSS-TLFVKGISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCR 60
Query: 202 PKGFAYVKFSSKEEADEALLQLNGQLVDGRVVVLDTTKTVKQKDQPDCKPKHA 360
PKGFAYV FSSKEEA++ALL+LN QLVDGRVV+LDTTK K + PD KP HA
Sbjct: 61 PKGFAYVTFSSKEEAEKALLELNAQLVDGRVVILDTTKAAKH-NPPDTKPNHA 112
>gi|297826049|ref|XP_002880907.1| RNA recognition motif-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 116
Score = 156 bits (392), Expect = 6e-036
Identities = 84/113 (74%), Positives = 96/113 (84%), Gaps = 3/113 (2%)
Frame = +1
Query: 22 SHLLNRSPNPSLVFSRTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVRCR 201
+H L RS P L+FSR+FSS TLFVKGISFSSTEETLTQAFSQYG+VL V+V+MDK+RCR
Sbjct: 3 NHFLYRSYTP-LLFSRSFSS-TLFVKGISFSSTEETLTQAFSQYGQVLRVDVIMDKIRCR 60
Query: 202 PKGFAYVKFSSKEEADEALLQLNGQLVDGRVVVLDTTKTVKQKDQPDCKPKHA 360
PKG AYV FSSKEEA +ALL+LNG+LVDGRVV+LD TK K + PD KPKHA
Sbjct: 61 PKGIAYVTFSSKEEAGKALLELNGRLVDGRVVILDITKAGKH-NPPDTKPKHA 112
>gi|296084877|emb|CBI28286.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 105 bits (261), Expect = 9e-021
Identities = 52/101 (51%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Frame = +1
Query: 4 DSFIMLSHLLNRSPNPSLVFSRTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVM 183
D+F+ S L + L+F R +S TLFVKGISFS+TE+TL +AFSQ+G V+ ++M
Sbjct: 9 DTFLRFSSLNPYLLSSQLIFCRGIAS-TLFVKGISFSTTEKTLAEAFSQFGEVVEAKIIM 67
Query: 184 DKVRCRPKGFAYVKFSSKEEADEALLQLNGQLVDGRVVVLD 306
DK + RPKGFAYV F+ ++EA++AL ++NG++VDGR V++D
Sbjct: 68 DKRKLRPKGFAYVTFTREDEAEKALTEMNGKVVDGRTVLVD 108
>gi|255565709|ref|XP_002523844.1| Cold-inducible RNA-binding protein, putative
[Ricinus communis]
Length = 121
Score = 101 bits (249), Expect = 2e-019
Identities = 51/110 (46%), Positives = 80/110 (72%), Gaps = 3/110 (2%)
Frame = +1
Query: 19 LSHLLNRSPNPSLVFS-RTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVR 195
L + + PN L FS + SS+ LFVKGISFSST E+LT+AFS++G ++ VN++ DK
Sbjct: 12 LQIISHSKPNTPLFFSTNSASSSRLFVKGISFSSTTESLTEAFSKFGEIVEVNIIKDKAM 71
Query: 196 CRPKGFAYVKFSSKEEADEALLQLNGQLVDGRVVVLD--TTKTVKQKDQP 339
RPKG+AYV F+++ EA +AL ++NG+++DGR V +D +++++ + QP
Sbjct: 72 DRPKGYAYVTFATENEAKKALTEMNGKVIDGRPVFVDNVSSRSIGRLRQP 121
>gi|255631468|gb|ACU16101.1| unknown [Glycine max]
Length = 113
Score = 95 bits (235), Expect = 9e-018
Identities = 49/101 (48%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
Frame = +1
Query: 7 SFIMLSHLLNRSPNPS-LVFSRTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVM 183
S ++LSHL +PS L+F RT +S +FVKG++FS+TEE L +AFSQYG VL N+++
Sbjct: 8 SRVILSHLKKPHASPSQLLFLRTMTS-KVFVKGLAFSTTEEELAKAFSQYGSVLKANIIL 66
Query: 184 DKVRCRPKGFAYVKFSSKEEADEALLQLNGQLVDGRVVVLD 306
+K + R KGF YV F+ +EEA +A + +NG+++ GRV+ +D
Sbjct: 67 NKAKNRSKGFGYVIFAKEEEACKAQIDMNGKILHGRVIYVD 107
>gi|20197660|gb|AAM15185.1| putative RNA-binding glycine rich protein (RGP-2)
[Arabidopsis thaliana]
Length = 63
Score = 94 bits (231), Expect = 3e-017
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +1
Query: 181 MDKVRCRPKGFAYVKFSSKEEADEALLQLNGQLVDGRVVVLDTTKTVKQKDQPDCKPKHA 360
MDK+RCRPKGFAYV FSSKEEA++ALL+LN QLVDGRVV+LDTTK K + PD KP HA
Sbjct: 1 MDKIRCRPKGFAYVTFSSKEEAEKALLELNAQLVDGRVVILDTTKAAKH-NPPDTKPNHA 59
>gi|224104887|ref|XP_002313606.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 91 bits (223), Expect = 2e-016
Identities = 42/85 (49%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = +1
Query: 43 PNPSLVFSRTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVRCRPKGFAYV 222
P P L FS+ FS+ +FVKG+SFSSTE+ + +AFS++G V+ +VMDK R RPKG+ +V
Sbjct: 22 PQPLLFFSKGFSA-KVFVKGLSFSSTEKKIAEAFSEFGEVIEAKIVMDKARKRPKGYGFV 80
Query: 223 KFSSKEEADEALLQLNGQLVDGRVV 297
F+ K+ A++A +NG+L+DGR +
Sbjct: 81 TFAKKDAAEKACEGMNGKLLDGRAI 105
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 181
Score = 89 bits (220), Expect = 5e-016
Identities = 43/114 (37%), Positives = 75/114 (65%), Gaps = 2/114 (1%)
Frame = +1
Query: 13 IMLSHLLNRSPNPSLVFSRTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKV 192
+++S L+ + S S + T L+V G+SF +TE+TL F Q+G ++ +N+VMDKV
Sbjct: 54 VLISSCLSTDSSSSPPSSSSGPKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKV 113
Query: 193 RCRPKGFAYVKFSSKEEADEALLQLNGQLVDGRVVVLDTTKTVKQKDQPDCKPK 354
RPKGFA++++ ++EEA +A+ ++G+ +DGRV+ ++ KT + D KP+
Sbjct: 114 ANRPKGFAFLRYETEEEAMKAIQGMHGKFLDGRVIFVEEAKT--RSDMSRAKPR 165
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 89 bits (218), Expect = 8e-016
Identities = 43/102 (42%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Frame = +1
Query: 22 SHLLNRSPNPSLVFSRTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVRCR 201
++L + P ++ FSR +T LFV G+SF +TE+ LT+AFS++G V+ V VVMD+V R
Sbjct: 13 NYLSSPCPRSTVFFSRGV-TTKLFVGGLSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQR 71
Query: 202 PKGFAYVKFSSKEEADEALLQLNGQLVDGRVVVLDTTKTVKQ 327
KGF +V+++S+ +A+ A ++NG+++ GR++ +DT K Q
Sbjct: 72 SKGFGFVQYASEADAERAKAEMNGKVLSGRIIFVDTVKPKSQ 113
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 87 bits (213), Expect = 3e-015
Identities = 41/100 (41%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Frame = +1
Query: 16 MLSHLLNRSPNPSLVFSRTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVR 195
+L+ L + + +PS F F T L+V G+SF +TEE+L AF +G+++ VN+VMDKV
Sbjct: 69 VLACLPSSASSPS-SFGFNFRKTKLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVA 127
Query: 196 CRPKGFAYVKFSSKEEADEALLQLNGQLVDGRVVVLDTTK 315
RP+GFA++++ ++EEA +A+ ++G+ +DGRV+ ++ K
Sbjct: 128 KRPRGFAFLRYETEEEAQKAIEGMHGKFLDGRVIFVEVAK 167
>gi|255579369|ref|XP_002530529.1| RNA binding protein, putative [Ricinus
communis]
Length = 127
Score = 87 bits (213), Expect = 3e-015
Identities = 43/92 (46%), Positives = 65/92 (70%)
Frame = +1
Query: 40 SPNPSLVFSRTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVRCRPKGFAY 219
S +PSL S +T LFV G+SF +T++ LT+AFSQYG+V+ +V D+V R KGF +
Sbjct: 17 STSPSLFVSYRGIATKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGF 76
Query: 220 VKFSSKEEADEALLQLNGQLVDGRVVVLDTTK 315
V F+S++EA AL ++NG+ ++GRV+ +D K
Sbjct: 77 VTFASEDEAHNALSEMNGKTLNGRVIYVDYAK 108
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 86 bits (210), Expect = 7e-015
Identities = 41/113 (36%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
Frame = +1
Query: 16 MLSHLLNRSPNPSLVFSRTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVR 195
+++ L+ + S S + + T L+V G+SF +TE+TL F Q+G+++ +N+VMDKV
Sbjct: 55 LITSCLSPDSSSSPPSSPSGTKTKLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVA 114
Query: 196 CRPKGFAYVKFSSKEEADEALLQLNGQLVDGRVVVLDTTKTVKQKDQPDCKPK 354
RP+GFA++++ ++EEA +A+ ++G+ +DGRV+ ++ KT + D KP+
Sbjct: 115 NRPRGFAFLRYETEEEAMKAIQGMHGKFLDGRVIFVEEAKT--RSDISRAKPR 165
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
Length = 137
Score = 84 bits (206), Expect = 2e-014
Identities = 46/116 (39%), Positives = 75/116 (64%), Gaps = 9/116 (7%)
Frame = +1
Query: 28 LLNRSPNPSLVFSRTFSST-------TLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMD 186
L++R +P+ ++R F T LF+ G+S +TE++L +AFSQYG+VL +V D
Sbjct: 13 LVSRRESPA-AYARPFLLTHSRGITYRLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTD 71
Query: 187 KVRCRPKGFAYVKFSSKEEADEALLQLNGQLVDGRVVVLDTTKTVKQKDQPDCKPK 354
K+ RPKGF +VKF+S+E A++A ++NG++++GRV+ +D K K D P+
Sbjct: 72 KMTNRPKGFGFVKFASEEAANKAKEEMNGKVLNGRVIYVDIAK-AKMNRTTDSSPR 126
>gi|225464267|ref|XP_002271224.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 170
Score = 84 bits (205), Expect = 3e-014
Identities = 36/89 (40%), Positives = 65/89 (73%)
Frame = +1
Query: 49 PSLVFSRTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVRCRPKGFAYVKF 228
PS + T L+V G+SF +TEE+L AF +G+++ VN+VMDK+ RP+GFA++++
Sbjct: 68 PSSPNQPSIPKTRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRY 127
Query: 229 SSKEEADEALLQLNGQLVDGRVVVLDTTK 315
S++EE+++A+ ++G+ +DGRV+ ++ K
Sbjct: 128 STEEESEKAIEGMHGKFLDGRVIFVEVAK 156
>gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT_06g016070
[Sorghum bicolor]
Length = 135
Score = 80 bits (196), Expect = 3e-013
Identities = 39/76 (51%), Positives = 56/76 (73%)
Frame = +1
Query: 88 LFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVRCRPKGFAYVKFSSKEEADEALLQL 267
LFV G+S +TEE+L +AFS+YG+V+ VV DKV PKGF +VKF+S EEA+ A ++
Sbjct: 37 LFVGGLSQFATEESLAEAFSRYGQVIEATVVRDKVTDIPKGFGFVKFASPEEANNAREEM 96
Query: 268 NGQLVDGRVVVLDTTK 315
NG+ ++GRV+ +D K
Sbjct: 97 NGKALNGRVIYVDIAK 112
>gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 79 bits (193), Expect = 7e-013
Identities = 41/101 (40%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Frame = +1
Query: 25 HLLNRSPN----PSLVFSRTFSSTTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKV 192
+L N SP+ P+L+ ++ LFV G+SF +TE+ L++ FSQYG+V+ +VMD+V
Sbjct: 11 NLTNLSPSFLLPPALLICCRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRV 70
Query: 193 RCRPKGFAYVKFSSKEEADEALLQLNGQLVDGRVVVLDTTK 315
R KGF +V F+S+EEA +A +++G+ ++GR + +D K
Sbjct: 71 SDRSKGFGFVTFASEEEAQKARTEMDGKELNGRTIFVDYAK 111
>gi|194699346|gb|ACF83757.1| unknown [Zea mays]
Length = 135
Score = 78 bits (191), Expect = 1e-012
Identities = 41/88 (46%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +1
Query: 88 LFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVRCRPKGFAYVKFSSKEEADEALLQL 267
LFV G+S +TE +L +AFS+YG+V+ VV DKV PKGF +VKF+S EEA+ A ++
Sbjct: 37 LFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREEM 96
Query: 268 NGQLVDGRVVVLDTTKTVKQKDQPDCKP 351
NG+ ++GRV+ +D K +Q D P
Sbjct: 97 NGKALNGRVIYVDIAK-ARQDRAADALP 123
>gi|226510389|ref|NP_001150093.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 78 bits (191), Expect = 1e-012
Identities = 41/88 (46%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +1
Query: 88 LFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVRCRPKGFAYVKFSSKEEADEALLQL 267
LFV G+S +TE +L +AFS+YG+V+ VV DKV PKGF +VKF+S EEA+ A ++
Sbjct: 37 LFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREEM 96
Query: 268 NGQLVDGRVVVLDTTKTVKQKDQPDCKP 351
NG+ ++GRV+ +D K +Q D P
Sbjct: 97 NGKALNGRVIYVDIAK-ARQDRAADALP 123
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 78 bits (191), Expect = 1e-012
Identities = 36/79 (45%), Positives = 58/79 (73%)
Frame = +1
Query: 79 STTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVRCRPKGFAYVKFSSKEEADEAL 258
+T LFV G+S +TE L++AFSQYG+V+ +VMD+ R KGF +V ++S++EA +AL
Sbjct: 38 TTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQKAL 97
Query: 259 LQLNGQLVDGRVVVLDTTK 315
++NG+ ++GRV+ +D K
Sbjct: 98 DEMNGKALNGRVIYVDYAK 116
>gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 78 bits (190), Expect = 1e-012
Identities = 31/78 (39%), Positives = 60/78 (76%)
Frame = +1
Query: 82 TTLFVKGISFSSTEETLTQAFSQYGRVLGVNVVMDKVRCRPKGFAYVKFSSKEEADEALL 261
T L+V G+SF +TEE+L AF +G+++ V +VMD++ RP+GFA+++++++EE+ +A+
Sbjct: 88 TKLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIE 147
Query: 262 QLNGQLVDGRVVVLDTTK 315
++G+ +DGRV+ ++ K
Sbjct: 148 GMHGKFLDGRVIFVEVAK 165
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,354,205,064,082
Number of Sequences: 15229318
Number of Extensions: 2354205064082
Number of Successful Extensions: 584002404
Number of sequences better than 0.0: 0
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