BLASTX 7.6.2
Query= UN19920 /QuerySize=1651
(1650 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G32720.1 | Symbols: AtLa1 | AtLa1 (Arabidopsis... 382 5e-106
TAIR9_protein||AT4G32720.2 | Symbols: AtLa1 | AtLa1 (Arabidopsis... 382 5e-106
TAIR9_protein||AT1G79880.1 | Symbols: | La domain-containing pr... 216 4e-056
TAIR9_protein||AT1G79880.2 | Symbols: | La domain-containing pr... 149 6e-036
TAIR9_protein||AT1G79880.3 | Symbols: | La domain-containing pr... 149 6e-036
TAIR9_protein||AT5G46250.1 | Symbols: | RNA recognition motif (... 52 1e-006
TAIR9_protein||AT5G46250.2 | Symbols: | RNA recognition motif (... 52 1e-006
TAIR9_protein||AT5G46250.3 | Symbols: | RNA recognition motif (... 52 1e-006
>TAIR9_protein||AT4G32720.1 | Symbols: AtLa1 | AtLa1 (Arabidopsis thaliana La
protein 1); RNA binding | chr4:15787313-15789683 FORWARD
Length = 434
Score = 382 bits (979), Expect = 5e-106
Identities = 191/212 (90%), Positives = 204/212 (96%)
Frame = +3
Query: 66 MSIPCLTEETAKSVLRQVEFYFSDSNLPIDDFLKKTVRESEDGLVSLGLICSFSKMRAYL 245
MSIPCLTEETAK+VLRQVEFYFSDSNLPIDDFLKKTV ESEDGLVSL LICSFSKMR YL
Sbjct: 1 MSIPCLTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYL 60
Query: 246 KLGDSKGDEVPEDTIKAVADTLRTSKALKVSEDGKKVGRSTELLKLEDLIEQLNARTVAV 425
KLGDSKGD++PEDTIKAVADTLRTS ALK+S+DGKKVGRSTELLKLEDLIEQLNARTVA
Sbjct: 61 KLGDSKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAA 120
Query: 426 SPFSYDVKREDVEAFFSQYGKVNSVRMPRHVAETRVFSGVALVEFPTEEEAQNVMKQSLV 605
SPFSYDVKREDVE+FFSQYGKVNSVRMPRHVAE+R+FSGVALVEFPTEE+AQNVMKQ+LV
Sbjct: 121 SPFSYDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNLV 180
Query: 606 FAGLELEMKTKKEFDDEREKDEEKFANYRPQK 701
FAG ELE+K KKEFD+EREKDE KFANY+PQK
Sbjct: 181 FAGQELELKPKKEFDNEREKDEVKFANYQPQK 212
Score = 361 bits (926), Expect = 8e-100
Identities = 186/231 (80%), Positives = 196/231 (84%), Gaps = 9/231 (3%)
Frame = +2
Query: 698 KASANQKNGSDHRNGSESEANYPKGLIISFTLKRSTEEGAKE-KSSEEAADKKMEESESK 874
K SANQKNGSDH+N S E +YPKGLIISFTLKRS EEG E KSSEE DK MEESE+K
Sbjct: 212 KGSANQKNGSDHKNNSAYEPDYPKGLIISFTLKRSAEEGTTEQKSSEEPTDKTMEESETK 271
Query: 875 PEDNPAADKENTDQAQGQGTEGEDDDESSDSPVKKGEGALATHKDNKDVVLREDLKAVFG 1054
P D P ADKENT + Q +G E EDD+ K+ +GALATHKDNKDVVLREDLKAVFG
Sbjct: 272 PADTPDADKENTGEVQAEGAEDEDDE-------KEEKGALATHKDNKDVVLREDLKAVFG 324
Query: 1055 KFGDVKFVDFKMGFETGYLRFDEPEASQKARAAAVLAKEGGLAVKNFIAVLEPLTGEAEK 1234
KFGDVKFVDFKMG ETGYLRFDEPEASQKARAAAVLA EGGLAVKNFIAVLEP+ GEAEK
Sbjct: 325 KFGDVKFVDFKMGSETGYLRFDEPEASQKARAAAVLANEGGLAVKNFIAVLEPVIGEAEK 384
Query: 1235 EYWGFLRSKDRFDKGGRGGRGGKRGGGRFGRKRGSDSPGGRWNKSQKVEA* 1387
EYW LRSKDRFDKGGRGGRGG+R GGRFGRKRGSDSPGGRWNKSQKVEA*
Sbjct: 385 EYWTLLRSKDRFDKGGRGGRGGRR-GGRFGRKRGSDSPGGRWNKSQKVEA* 434
>TAIR9_protein||AT4G32720.2 | Symbols: AtLa1 | AtLa1 (Arabidopsis thaliana La
protein 1); RNA binding | chr4:15787313-15789498 FORWARD
Length = 405
Score = 382 bits (979), Expect = 5e-106
Identities = 191/212 (90%), Positives = 204/212 (96%)
Frame = +3
Query: 66 MSIPCLTEETAKSVLRQVEFYFSDSNLPIDDFLKKTVRESEDGLVSLGLICSFSKMRAYL 245
MSIPCLTEETAK+VLRQVEFYFSDSNLPIDDFLKKTV ESEDGLVSL LICSFSKMR YL
Sbjct: 1 MSIPCLTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYL 60
Query: 246 KLGDSKGDEVPEDTIKAVADTLRTSKALKVSEDGKKVGRSTELLKLEDLIEQLNARTVAV 425
KLGDSKGD++PEDTIKAVADTLRTS ALK+S+DGKKVGRSTELLKLEDLIEQLNARTVA
Sbjct: 61 KLGDSKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAA 120
Query: 426 SPFSYDVKREDVEAFFSQYGKVNSVRMPRHVAETRVFSGVALVEFPTEEEAQNVMKQSLV 605
SPFSYDVKREDVE+FFSQYGKVNSVRMPRHVAE+R+FSGVALVEFPTEE+AQNVMKQ+LV
Sbjct: 121 SPFSYDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNLV 180
Query: 606 FAGLELEMKTKKEFDDEREKDEEKFANYRPQK 701
FAG ELE+K KKEFD+EREKDE KFANY+PQK
Sbjct: 181 FAGQELELKPKKEFDNEREKDEVKFANYQPQK 212
Score = 305 bits (781), Expect = 5e-083
Identities = 158/200 (79%), Positives = 167/200 (83%), Gaps = 8/200 (4%)
Frame = +2
Query: 698 KASANQKNGSDHRNGSESEANYPKGLIISFTLKRSTEEGAKE-KSSEEAADKKMEESESK 874
K SANQKNGSDH+N S E +YPKGLIISFTLKRS EEG E KSSEE DK MEESE+K
Sbjct: 212 KGSANQKNGSDHKNNSAYEPDYPKGLIISFTLKRSAEEGTTEQKSSEEPTDKTMEESETK 271
Query: 875 PEDNPAADKENTDQAQGQGTEGEDDDESSDSPVKKGEGALATHKDNKDVVLREDLKAVFG 1054
P D P ADKENT + Q +G E EDD+ K+ +GALATHKDNKDVVLREDLKAVFG
Sbjct: 272 PADTPDADKENTGEVQAEGAEDEDDE-------KEEKGALATHKDNKDVVLREDLKAVFG 324
Query: 1055 KFGDVKFVDFKMGFETGYLRFDEPEASQKARAAAVLAKEGGLAVKNFIAVLEPLTGEAEK 1234
KFGDVKFVDFKMG ETGYLRFDEPEASQKARAAAVLA EGGLAVKNFIAVLEP+ GEAEK
Sbjct: 325 KFGDVKFVDFKMGSETGYLRFDEPEASQKARAAAVLANEGGLAVKNFIAVLEPVIGEAEK 384
Query: 1235 EYWGFLRSKDRFDKGGRGGR 1294
EYW LRSKDRFDKGGRGGR
Sbjct: 385 EYWTLLRSKDRFDKGGRGGR 404
>TAIR9_protein||AT1G79880.1 | Symbols: | La domain-containing protein |
chr1:30046222-30048336 REVERSE
Length = 400
Score = 216 bits (549), Expect = 4e-056
Identities = 105/192 (54%), Positives = 147/192 (76%)
Frame = +3
Query: 87 EETAKSVLRQVEFYFSDSNLPIDDFLKKTVRESEDGLVSLGLICSFSKMRAYLKLGDSKG 266
EETAK +L QVEFYFSDSNLP D FL + V +S+DGLVSL L+CSFS+MR L LG+
Sbjct: 7 EETAKKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGLGNINR 66
Query: 267 DEVPEDTIKAVADTLRTSKALKVSEDGKKVGRSTELLKLEDLIEQLNARTVAVSPFSYDV 446
+++P ++ VA+ LRTS LKVS +G+++GR T+L K E+++EQ++ RT+A SPF Y +
Sbjct: 67 EDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASPFEYSI 126
Query: 447 KREDVEAFFSQYGKVNSVRMPRHVAETRVFSGVALVEFPTEEEAQNVMKQSLVFAGLELE 626
K EDV +FFSQY KVNSVR+P ++A+ R F G ALVEF +E++ Q++++QSLV+AG +L
Sbjct: 127 KMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYAGADLV 186
Query: 627 MKTKKEFDDERE 662
+ K +FD +RE
Sbjct: 187 LIPKSDFDCQRE 198
Score = 72 bits (176), Expect = 7e-013
Identities = 55/160 (34%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Frame = +2
Query: 839 AADKKMEESESKPEDNPAADKENTDQAQG-QGTEGEDDDESSDSPVKKGEGALATHK-DN 1012
A+++K+ E KP KE D+ G E E+ D S S K L +N
Sbjct: 227 ASEEKVTNKE-KPSALKNKIKEKEDKETGIADREKENGDNSCASLCKDNTDQLVVPPWNN 285
Query: 1013 KDVVLREDLKAVFGKFGDVKFVDFKMGFETGYLRFDEPEASQKARAAAVLAKEGGLAVK- 1189
+ V E LK +F +FG V+ +++ G ++GY+ F + E + KARAA GGL VK
Sbjct: 286 SNSVSSEVLKDLFQRFGSVEHIEYSGGLDSGYVWFTDSETAMKARAAVEFV--GGLVVKN 343
Query: 1190 NFIAVLEPLTGEAEKEYWGFLRSKDRFDKGGRGGRGGKRG 1309
NF LE + GE E+E W L S + +GG+ G ++G
Sbjct: 344 NFSVALEAINGEMERELWKRLSSAEL--EGGKEGHKKEKG 381
>TAIR9_protein||AT1G79880.2 | Symbols: | La domain-containing protein |
chr1:30046222-30048014 REVERSE
Length = 346
Score = 149 bits (375), Expect = 6e-036
Identities = 71/144 (49%), Positives = 107/144 (74%)
Frame = +3
Query: 231 MRAYLKLGDSKGDEVPEDTIKAVADTLRTSKALKVSEDGKKVGRSTELLKLEDLIEQLNA 410
MR L LG+ +++P ++ VA+ LRTS LKVS +G+++GR T+L K E+++EQ++
Sbjct: 1 MRNLLGLGNINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHR 60
Query: 411 RTVAVSPFSYDVKREDVEAFFSQYGKVNSVRMPRHVAETRVFSGVALVEFPTEEEAQNVM 590
RT+A SPF Y +K EDV +FFSQY KVNSVR+P ++A+ R F G ALVEF +E++ Q+++
Sbjct: 61 RTLAASPFEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDIL 120
Query: 591 KQSLVFAGLELEMKTKKEFDDERE 662
+QSLV+AG +L + K +FD +RE
Sbjct: 121 RQSLVYAGADLVLIPKSDFDCQRE 144
Score = 72 bits (176), Expect = 7e-013
Identities = 55/160 (34%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Frame = +2
Query: 839 AADKKMEESESKPEDNPAADKENTDQAQG-QGTEGEDDDESSDSPVKKGEGALATHK-DN 1012
A+++K+ E KP KE D+ G E E+ D S S K L +N
Sbjct: 173 ASEEKVTNKE-KPSALKNKIKEKEDKETGIADREKENGDNSCASLCKDNTDQLVVPPWNN 231
Query: 1013 KDVVLREDLKAVFGKFGDVKFVDFKMGFETGYLRFDEPEASQKARAAAVLAKEGGLAVK- 1189
+ V E LK +F +FG V+ +++ G ++GY+ F + E + KARAA GGL VK
Sbjct: 232 SNSVSSEVLKDLFQRFGSVEHIEYSGGLDSGYVWFTDSETAMKARAAVEFV--GGLVVKN 289
Query: 1190 NFIAVLEPLTGEAEKEYWGFLRSKDRFDKGGRGGRGGKRG 1309
NF LE + GE E+E W L S + +GG+ G ++G
Sbjct: 290 NFSVALEAINGEMERELWKRLSSAEL--EGGKEGHKKEKG 327
>TAIR9_protein||AT1G79880.3 | Symbols: | La domain-containing protein |
chr1:30046222-30048014 REVERSE
Length = 358
Score = 149 bits (375), Expect = 6e-036
Identities = 71/144 (49%), Positives = 107/144 (74%)
Frame = +3
Query: 231 MRAYLKLGDSKGDEVPEDTIKAVADTLRTSKALKVSEDGKKVGRSTELLKLEDLIEQLNA 410
MR L LG+ +++P ++ VA+ LRTS LKVS +G+++GR T+L K E+++EQ++
Sbjct: 1 MRNLLGLGNINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHR 60
Query: 411 RTVAVSPFSYDVKREDVEAFFSQYGKVNSVRMPRHVAETRVFSGVALVEFPTEEEAQNVM 590
RT+A SPF Y +K EDV +FFSQY KVNSVR+P ++A+ R F G ALVEF +E++ Q+++
Sbjct: 61 RTLAASPFEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDIL 120
Query: 591 KQSLVFAGLELEMKTKKEFDDERE 662
+QSLV+AG +L + K +FD +RE
Sbjct: 121 RQSLVYAGADLVLIPKSDFDCQRE 144
Score = 69 bits (167), Expect = 8e-012
Identities = 51/145 (35%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Frame = +2
Query: 839 AADKKMEESESKPEDNPAADKENTDQAQG-QGTEGEDDDESSDSPVKKGEGALATHK-DN 1012
A+++K+ E KP KE D+ G E E+ D S S K L +N
Sbjct: 173 ASEEKVTNKE-KPSALKNKIKEKEDKETGIADREKENGDNSCASLCKDNTDQLVVPPWNN 231
Query: 1013 KDVVLREDLKAVFGKFGDVKFVDFKMGFETGYLRFDEPEASQKARAAAVLAKEGGLAVK- 1189
+ V E LK +F +FG V+ +++ G ++GY+ F + E + KARAA GGL VK
Sbjct: 232 SNSVSSEVLKDLFQRFGSVEHIEYSGGLDSGYVWFTDSETAMKARAAVEFV--GGLVVKN 289
Query: 1190 NFIAVLEPLTGEAEKEYWGFLRSKD 1264
NF LE + GE E+E W L S +
Sbjct: 290 NFSVALEAINGEMERELWKRLSSAE 314
>TAIR9_protein||AT5G46250.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:18755388-18758056 FORWARD
Length = 423
Score = 52 bits (122), Expect = 1e-006
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +3
Query: 48 PLSEERMSIPCLTEETAKSVLRQVEFYFSDSNLPIDDFLKKTVRESEDGLVSLGLICSFS 227
P+ + + +P +E + ++RQVE+YFSD NLP D FL ++ ++ G V + I +F
Sbjct: 90 PVETDGVVVP--IDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFH 147
Query: 228 KMR 236
KM+
Sbjct: 148 KMK 150
>TAIR9_protein||AT5G46250.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:18755388-18757723 FORWARD
Length = 341
Score = 52 bits (122), Expect = 1e-006
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +3
Query: 48 PLSEERMSIPCLTEETAKSVLRQVEFYFSDSNLPIDDFLKKTVRESEDGLVSLGLICSFS 227
P+ + + +P +E + ++RQVE+YFSD NLP D FL ++ ++ G V + I +F
Sbjct: 90 PVETDGVVVP--IDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFH 147
Query: 228 KMR 236
KM+
Sbjct: 148 KMK 150
>TAIR9_protein||AT5G46250.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:18755388-18757723 FORWARD
Length = 341
Score = 52 bits (122), Expect = 1e-006
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +3
Query: 48 PLSEERMSIPCLTEETAKSVLRQVEFYFSDSNLPIDDFLKKTVRESEDGLVSLGLICSFS 227
P+ + + +P +E + ++RQVE+YFSD NLP D FL ++ ++ G V + I +F
Sbjct: 90 PVETDGVVVP--IDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFH 147
Query: 228 KMR 236
KM+
Sbjct: 148 KMK 150
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,372,867,301
Number of Sequences: 33410
Number of Extensions: 10372867301
Number of Successful Extensions: 348709919
Number of sequences better than 0.0: 0
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