BLASTX 7.6.2
Query= UN19953 /QuerySize=1301
(1300 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P31542|CLPAB_SOLLC ATP-dependent Clp protease ATP-binding sub... 511 5e-144
sp|P31541|CLPAA_SOLLC ATP-dependent Clp protease ATP-binding sub... 511 7e-144
sp|P35100|CLPC_PEA ATP-dependent Clp protease ATP-binding subuni... 509 2e-143
sp|P46523|CLPA_BRANA ATP-dependent Clp protease ATP-binding subu... 481 6e-135
sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-binding subu... 434 6e-121
sp|P51332|CLPC_PORPU ATP-dependent Clp protease ATP-binding subu... 428 7e-119
sp|Q1XDF4|CLPC_PORYE ATP-dependent Clp protease ATP-binding subu... 427 1e-118
sp|Q9TM05|CLPC_CYACA ATP-dependent Clp protease ATP-binding subu... 422 4e-117
sp|P42762|ERD1_ARATH ERD1 protein, chloroplastic OS=Arabidopsis ... 357 2e-097
sp|Q8EU05|CLPB_OCEIH Chaperone protein clpB OS=Oceanobacillus ih... 351 7e-096
sp|P37571|CLPC_BACSU Negative regulator of genetic competence cl... 341 7e-093
sp|P49574|CLPC_ODOSI ATP-dependent Clp protease ATP-binding subu... 302 5e-081
sp|Q8DJ40|CLPB1_THEEB Chaperone protein clpB 1 OS=Thermosynechoc... 299 3e-080
sp|O87444|CLPB_PLEBO Chaperone protein clpB OS=Plectonema boryan... 299 4e-080
sp|Q72IK9|CLPB_THET2 Chaperone protein clpB OS=Thermus thermophi... 296 3e-079
sp|Q9RA63|CLPB_THET8 Chaperone protein clpB OS=Thermus thermophi... 296 3e-079
sp|P53533|CLPB1_SYNE7 Chaperone protein clpB 1 OS=Synechococcus ... 294 1e-078
sp|Q7X2S8|CLPB_MEIRU Chaperone protein clpB OS=Meiothermus ruber... 292 6e-078
sp|Q7NFE9|CLPB_GLOVI Chaperone protein clpB OS=Gloeobacter viola... 288 7e-077
sp|Q74X11|CLPB_YERPE Chaperone protein clpB OS=Yersinia pestis G... 287 2e-076
>sp|P31542|CLPAB_SOLLC ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1
Length = 923
Score = 511 bits (1315), Expect = 5e-144
Identities = 259/278 (93%), Positives = 269/278 (96%)
Frame = -3
Query: 1289 GPNVTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRA 1110
GP VTE+DIQHIVS+WTGIPVEKVS+DES RLLKME+TLHTR+IGQDEAVKAISRAIRRA
Sbjct: 566 GPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRA 625
Query: 1109 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 930
RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI
Sbjct: 626 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 685
Query: 929 GSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 750
GSPPGYVGYTEGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV
Sbjct: 686 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 745
Query: 749 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 570
DFKNTLLIMTSNVGSSVIEKGGRRIGFDLD DEKDSSYNRIKSLVTEELKQYFRPEFLNR
Sbjct: 746 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDLDEKDSSYNRIKSLVTEELKQYFRPEFLNR 805
Query: 569 LDEMIVFRQLTKLEVKEIADIMLKEVVVRLRTRRLSFK 456
LDEMIVFRQLTKLEVKEIADIMLKEV RL+ + + +
Sbjct: 806 LDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEIELQ 843
>sp|P31541|CLPAA_SOLLC ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4A, chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1
Length = 926
Score = 511 bits (1314), Expect = 7e-144
Identities = 258/281 (91%), Positives = 270/281 (96%)
Frame = -3
Query: 1298 EEGGPNVTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAI 1119
+ GP VTE+DIQHIVS+WTGIPVEKVS+DES RLLKME+TLHTRVIGQDEAVKAISRAI
Sbjct: 566 DAAGPIVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRVIGQDEAVKAISRAI 625
Query: 1118 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVS 939
RRARVGLKNPNRPIASFIFSGPTGVGKSELAK+LA YYFGSEEAMIRLDMSEFMERHTVS
Sbjct: 626 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHTVS 685
Query: 938 KLIGSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 759
KLIGSPPGYVGYTEGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKG
Sbjct: 686 KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 745
Query: 758 RTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEF 579
RTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEF
Sbjct: 746 RTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEF 805
Query: 578 LNRLDEMIVFRQLTKLEVKEIADIMLKEVVVRLRTRRLSFK 456
LNRL EMIVFRQLTKLEVKEIADIMLKEV VRL+ + + +
Sbjct: 806 LNRLSEMIVFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQ 846
>sp|P35100|CLPC_PEA ATP-dependent Clp protease ATP-binding subunit clpC homolog,
chloroplastic OS=Pisum sativum PE=2 SV=1
Length = 922
Score = 509 bits (1310), Expect = 2e-143
Identities = 258/278 (92%), Positives = 268/278 (96%)
Frame = -3
Query: 1289 GPNVTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRA 1110
GP VTE DIQHIVS+WTGIPV+KVS+DES RLLKME TLH R+IGQDEAV+AISRAIRRA
Sbjct: 566 GPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRIIGQDEAVQAISRAIRRA 625
Query: 1109 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 930
RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI
Sbjct: 626 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 685
Query: 929 GSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 750
GSPPGYVGYTEGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV
Sbjct: 686 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 745
Query: 749 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 570
DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR
Sbjct: 746 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 805
Query: 569 LDEMIVFRQLTKLEVKEIADIMLKEVVVRLRTRRLSFK 456
LDEMIVFRQLTKLEVKEIADIMLKEV RL+T+ + +
Sbjct: 806 LDEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKEIELQ 843
>sp|P46523|CLPA_BRANA ATP-dependent Clp protease ATP-binding subunit clpA
homolog, chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2 SV=1
Length = 874
Score = 481 bits (1237), Expect = 6e-135
Identities = 248/278 (89%), Positives = 262/278 (94%), Gaps = 1/278 (0%)
Frame = -3
Query: 1289 GPNVTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRA 1110
GP VTESDIQHIVS+WTGI VEKVS+DES LLKME+TLH RVIGQDEAVKAISRAIRRA
Sbjct: 514 GPMVTESDIQHIVSSWTGILVEKVSTDESDLLLKMEETLHKRVIGQDEAVKAISRAIRRA 573
Query: 1109 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 930
RVGLKNPNRPIASFIF GPTGVGKSELAKALAAYYFG EEAMIRLDMSEFMERHTVSKLI
Sbjct: 574 RVGLKNPNRPIASFIFFGPTGVGKSELAKALAAYYFGCEEAMIRLDMSEFMERHTVSKLI 633
Query: 929 GSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 750
GSPPGYVGYTE QLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLT+SKGRTV
Sbjct: 634 GSPPGYVGYTEPPQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTNSKGRTV 693
Query: 749 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 570
DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY EKDSSYNRIKSLVT+ELKQYFRPEFLNR
Sbjct: 694 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-EKDSSYNRIKSLVTQELKQYFRPEFLNR 752
Query: 569 LDEMIVFRQLTKLEVKEIADIMLKEVVVRLRTRRLSFK 456
LDEMI+FRQLTKLEVKEIADI+L+E+ RL+ + + +
Sbjct: 753 LDEMILFRQLTKLEVKEIADILLQELFERLKKKEVELQ 790
>sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-binding subunit clpA
homolog OS=Guillardia theta GN=clpC PE=3 SV=1
Length = 819
Score = 434 bits (1116), Expect = 6e-121
Identities = 215/275 (78%), Positives = 244/275 (88%)
Frame = -3
Query: 1280 VTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVG 1101
VTE DI IV+ WTGIPV K++ ES +LL+ME+TLH R+IGQDEAV A+S+AIRRARVG
Sbjct: 472 VTEEDIAQIVAAWTGIPVNKMTRSESEKLLQMEETLHGRIIGQDEAVVAVSKAIRRARVG 531
Query: 1100 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 921
LKNPNRPIASFIFSGPTGVGK+EL KALA+Y+FGSEEAM+RLDMSE+MERHTVSKLIGSP
Sbjct: 532 LKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSP 591
Query: 920 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 741
PGYVGY EGGQLTE+VRRRPYT+VLFDEIEK HPDVFN++LQILEDGRLTDSKGRTVDFK
Sbjct: 592 PGYVGYNEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFK 651
Query: 740 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 561
NTLLI+TSNVGS VIEKGG +GFDL D+ +S Y RIK+LV EELKQYFRPEFLNRLDE
Sbjct: 652 NTLLILTSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDE 711
Query: 560 MIVFRQLTKLEVKEIADIMLKEVVVRLRTRRLSFK 456
+IVFRQLTK EV EIA+IMLKEV R+ + + +
Sbjct: 712 IIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLE 746
>sp|P51332|CLPC_PORPU ATP-dependent Clp protease ATP-binding subunit clpA
homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1
Length = 821
Score = 428 bits (1098), Expect = 7e-119
Identities = 206/270 (76%), Positives = 243/270 (90%)
Frame = -3
Query: 1286 PNVTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRAR 1107
P VTE DI IV+ WTGIPV K++ ES +L++ME+TLH R+IGQDEAV A+SRAIRRAR
Sbjct: 473 PVVTEDDIAEIVAAWTGIPVTKLTKSESEKLMQMEETLHGRIIGQDEAVIAVSRAIRRAR 532
Query: 1106 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 927
VGLKNPNRPIASFIFSGPTGVGK+EL KALA+Y+FGSE +MIRLDMSE+MERHTVSKLIG
Sbjct: 533 VGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIG 592
Query: 926 SPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 747
SPPGYVGY+EGG LTEAVR++PYT++LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+D
Sbjct: 593 SPPGYVGYSEGGYLTEAVRKKPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTID 652
Query: 746 FKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRL 567
FKNTLLIMTSN+GS VIEKGG +GF+L D+ +S Y R++SLV EELKQYFRPEFLNRL
Sbjct: 653 FKNTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRL 712
Query: 566 DEMIVFRQLTKLEVKEIADIMLKEVVVRLR 477
DE+IVFRQLTK EV+EIA++ML EV R++
Sbjct: 713 DEIIVFRQLTKDEVREIAELMLNEVFARIK 742
>sp|Q1XDF4|CLPC_PORYE ATP-dependent Clp protease ATP-binding subunit clpA
homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1
Length = 821
Score = 427 bits (1097), Expect = 1e-118
Identities = 206/270 (76%), Positives = 242/270 (89%)
Frame = -3
Query: 1286 PNVTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRAR 1107
P VTE DI IV+ WTGIPV K++ ES +L+ ME+TLH R+IGQDEAV A+SRAIRRAR
Sbjct: 473 PVVTEDDIAEIVAAWTGIPVTKLTKSESEKLMHMEETLHGRIIGQDEAVVAVSRAIRRAR 532
Query: 1106 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 927
VGLKNPNRPIASFIFSGPTGVGK+EL KALA+Y+FGSE +MIRLDMSE+MERHTVSKLIG
Sbjct: 533 VGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIG 592
Query: 926 SPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 747
SPPGYVGY+EGG LTEAVR++PYT++LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+D
Sbjct: 593 SPPGYVGYSEGGYLTEAVRKKPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTID 652
Query: 746 FKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRL 567
FKNTLLIMTSN+GS VIEKGG +GF+L D+ +S Y R++SLV EELKQYFRPEFLNRL
Sbjct: 653 FKNTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRL 712
Query: 566 DEMIVFRQLTKLEVKEIADIMLKEVVVRLR 477
DE+IVFRQLTK EV+EIA++ML EV R++
Sbjct: 713 DEIIVFRQLTKDEVREIAELMLNEVFARIK 742
>sp|Q9TM05|CLPC_CYACA ATP-dependent Clp protease ATP-binding subunit clpA
homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1
Length = 854
Score = 422 bits (1083), Expect = 4e-117
Identities = 204/277 (73%), Positives = 249/277 (89%)
Frame = -3
Query: 1286 PNVTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRAR 1107
P V E DI +IVS+WTGIPV K++ ES +LL ME+TLH+R++GQ+EAV A+S+AIRRAR
Sbjct: 503 PIVNEDDIANIVSSWTGIPVSKLTKSESEKLLHMEETLHSRIVGQNEAVIAVSKAIRRAR 562
Query: 1106 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 927
VGLKNPNRPIASFIFSGPTGVGK+EL KA+A+Y+FGSEEAM+RLDMSE+MERHTVSKLIG
Sbjct: 563 VGLKNPNRPIASFIFSGPTGVGKTELTKAMASYFFGSEEAMVRLDMSEYMERHTVSKLIG 622
Query: 926 SPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 747
SPPGYVGY EGGQLTEAVR+RPYT+VLFDEIEKAHPDVFN++LQILEDGRLTDSKGRT+D
Sbjct: 623 SPPGYVGYNEGGQLTEAVRKRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTID 682
Query: 746 FKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRL 567
FKNTLLIMTSN+GS VIEK G +GF+L+ + ++ Y+R+++LV EELKQYFRPEFLNR+
Sbjct: 683 FKNTLLIMTSNIGSKVIEKKGGGLGFELEENIEELQYSRMRNLVNEELKQYFRPEFLNRV 742
Query: 566 DEMIVFRQLTKLEVKEIADIMLKEVVVRLRTRRLSFK 456
DE+IVFRQLTK EV++IA IML+E+ R++ + +S +
Sbjct: 743 DEIIVFRQLTKDEVRDIAHIMLREIFERVKQQGISLQ 779
>sp|P42762|ERD1_ARATH ERD1 protein, chloroplastic OS=Arabidopsis thaliana
GN=ERD1 PE=2 SV=1
Length = 945
Score = 357 bits (914), Expect = 2e-097
Identities = 174/268 (64%), Positives = 220/268 (82%), Gaps = 1/268 (0%)
Frame = -3
Query: 1280 VTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVG 1101
V DI + S W+GIPV+++++DE L+ +E L RV+GQDEAV AISRA++R+RVG
Sbjct: 590 VGPDDIAAVASVWSGIPVQQITADERMLLMSLEDQLRGRVVGQDEAVAAISRAVKRSRVG 649
Query: 1100 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 921
LK+P+RPIA+ +F GPTGVGK+EL KALAA YFGSEE+M+RLDMSE+MERHTVSKLIGSP
Sbjct: 650 LKDPDRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHTVSKLIGSP 709
Query: 920 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 741
PGYVG+ EGG LTEA+RRRP+T+VLFDEIEKAHPD+FN++LQ+ EDG LTDS+GR V FK
Sbjct: 710 PGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFK 769
Query: 740 NTLLIMTSNVGSSVIEKGGR-RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLD 564
N L+IMTSNVGS I KG IGF LD DE+ +SY +K+LV EELK YFRPE LNR+D
Sbjct: 770 NALIIMTSNVGSLAIAKGRHGSIGFILDDDEEAASYTGMKALVVEELKNYFRPELLNRID 829
Query: 563 EMIVFRQLTKLEVKEIADIMLKEVVVRL 480
E+++FRQL K ++ EI ++ML+++ RL
Sbjct: 830 EIVIFRQLEKAQMMEILNLMLQDLKSRL 857
>sp|Q8EU05|CLPB_OCEIH Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB
PE=3 SV=1
Length = 809
Score = 351 bits (900), Expect = 7e-096
Identities = 174/272 (63%), Positives = 219/272 (80%), Gaps = 3/272 (1%)
Frame = -3
Query: 1280 VTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVG 1101
VT DI +VSTWTG+PV K++ DE+ RLL ME+ LH RVIGQ EAV A+++AIRRAR G
Sbjct: 474 VTMEDIAAVVSTWTGVPVSKLTKDETDRLLNMEKILHDRVIGQSEAVNAVAKAIRRARAG 533
Query: 1100 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 921
LK+P RPI SFIF GPTGVGK+ELA+ALA F E+AMIR+DMSE+MERH S+L+GSP
Sbjct: 534 LKDPKRPIGSFIFLGPTGVGKTELARALAEVMFADEDAMIRIDMSEYMERHATSRLVGSP 593
Query: 920 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 741
PGYVGY EGGQLTE VRR+PY++VL DE+EKAHP+VFN++LQ+LEDGRLTDSKGR VDF+
Sbjct: 594 PGYVGYDEGGQLTEKVRRKPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFR 653
Query: 740 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 561
NT++IMTSNVG+S + K + +GF LD +EKD Y +KS V EELK+ FRPEFLNR+DE
Sbjct: 654 NTVIIMTSNVGASEL-KRNKYVGFALDNEEKD--YKDMKSKVIEELKKAFRPEFLNRIDE 710
Query: 560 MIVFRQLTKLEVKEIADIMLKEVVVRLRTRRL 465
IVF L K +K+I +M++++ RL+ + L
Sbjct: 711 TIVFHSLEKEHMKDIVTLMVQQLQKRLKEQDL 742
>sp|P37571|CLPC_BACSU Negative regulator of genetic competence clpC/mecB
OS=Bacillus subtilis GN=clpC PE=1 SV=1
Length = 810
Score = 341 bits (874), Expect = 7e-093
Identities = 167/275 (60%), Positives = 219/275 (79%), Gaps = 3/275 (1%)
Frame = -3
Query: 1280 VTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVG 1101
VT DI +VS+WTG+PV K++ E+ +LL ME LH+RVIGQDEAV A+++A+RRAR G
Sbjct: 471 VTVDDIAMVVSSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAG 530
Query: 1100 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 921
LK+P RPI SFIF GPTGVGK+ELA+ALA FG EE+MIR+DMSE+ME+H+ S+L+GSP
Sbjct: 531 LKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSP 590
Query: 920 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 741
PGYVGY EGGQLTE VRR+PY++VL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+
Sbjct: 591 PGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFR 650
Query: 740 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 561
NT+LIMTSNVG+S + K + +GF++ ++ ++ +K V ELK+ FRPEF+NR+DE
Sbjct: 651 NTILIMTSNVGASEL-KRNKYVGFNV--QDETQNHKDMKDKVMGELKRAFRPEFINRIDE 707
Query: 560 MIVFRQLTKLEVKEIADIMLKEVVVRLRTRRLSFK 456
+IVF L K + EI +M ++ RL+ + LS +
Sbjct: 708 IIVFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIE 742
>sp|P49574|CLPC_ODOSI ATP-dependent Clp protease ATP-binding subunit clpA
homolog OS=Odontella sinensis GN=clpC PE=3 SV=1
Length = 885
Score = 302 bits (772), Expect = 5e-081
Identities = 138/197 (70%), Positives = 176/197 (89%)
Frame = -3
Query: 1280 VTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVG 1101
V E D+ +++ WTGIPV K+S ES RLL ME+TLH R+IGQ A+ ++S+AIRRARVG
Sbjct: 486 VLEGDVAEVIAGWTGIPVNKISDSESKRLLTMEETLHERLIGQHHAIVSVSKAIRRARVG 545
Query: 1100 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 921
L+NP+RPIASFIF+GPTGVGK+EL KAL+ Y FG+E++MIRLDMSE+ME+HTV+KLIGSP
Sbjct: 546 LRNPDRPIASFIFAGPTGVGKTELTKALSEYMFGNEDSMIRLDMSEYMEKHTVAKLIGSP 605
Query: 920 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 741
PGYVGY EGGQLTEAV+ +PY++VL DE+EKAHPDVFN++LQIL+DGRLTDSKGRT+DF+
Sbjct: 606 PGYVGYNEGGQLTEAVQTKPYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKGRTIDFR 665
Query: 740 NTLLIMTSNVGSSVIEK 690
NT++IMT+N+G+ +IEK
Sbjct: 666 NTMIIMTTNLGAKIIEK 682
>sp|Q8DJ40|CLPB1_THEEB Chaperone protein clpB 1 OS=Thermosynechococcus elongatus
(strain BP-1) GN=clpB1 PE=3 SV=1
Length = 871
Score = 299 bits (765), Expect = 3e-080
Identities = 155/262 (59%), Positives = 198/262 (75%), Gaps = 16/262 (6%)
Frame = -3
Query: 1280 VTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVG 1101
VTE+DI I+S WTGIPV K+ E+ +LL +E+ LH RV+GQDEAV A++ AI+R+R G
Sbjct: 536 VTEADIAEIISKWTGIPVSKLVESEAQKLLHLEEELHKRVVGQDEAVSAVAEAIQRSRAG 595
Query: 1100 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 921
L +PNRPIASFIF GPTGVGK+ELAKALAA+ F +EEA++R+DMSE+ME+H VS+LIG+P
Sbjct: 596 LADPNRPIASFIFLGPTGVGKTELAKALAAFMFDTEEALVRIDMSEYMEKHAVSRLIGAP 655
Query: 920 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 741
PGYVGY EGGQLTEA+RRRPY +VLFDEIEKAHPDVFN+ LQIL+DGR+TDS+GRTVDFK
Sbjct: 656 PGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVFLQILDDGRVTDSQGRTVDFK 715
Query: 740 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFR---PEFL-- 576
NT++IMTSN+GS I G D Y E YNR+ + + F EF+
Sbjct: 716 NTIIIMTSNIGSQYILDVA---GDDSRYSE---MYNRVMEAMRAHFRPEFLNRVDEFIIF 769
Query: 575 --NRLDEMIVFRQLTKLEVKEI 516
R D++ RQ+ +L+V+ +
Sbjct: 770 HSLRKDQL---RQIVQLQVQRL 788
>sp|O87444|CLPB_PLEBO Chaperone protein clpB OS=Plectonema boryanum GN=clpB PE=2
SV=2
Length = 873
Score = 299 bits (764), Expect = 4e-080
Identities = 152/279 (54%), Positives = 201/279 (72%), Gaps = 12/279 (4%)
Frame = -3
Query: 1280 VTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVG 1101
V ESDI I+S WTGIPV K+ E +LL+++ LH RVIGQDEAV A+S AI+R+R G
Sbjct: 538 VLESDIAEIISKWTGIPVSKLVESEMQKLLQLDDVLHQRVIGQDEAVTAVSDAIQRSRAG 597
Query: 1100 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 921
L +PNRP ASFIF GPTGVGK+ELAKALAA+ F +EEAM+R+DMSE+ME+H+VS+LIG+P
Sbjct: 598 LSDPNRPTASFIFLGPTGVGKTELAKALAAFLFDTEEAMVRIDMSEYMEKHSVSRLIGAP 657
Query: 920 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 741
PGYVGY EGGQLTEAVRRRPY+++LFDEIEKAHPDVFN+MLQIL+DGR+TDS+GRTVDFK
Sbjct: 658 PGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDFK 717
Query: 740 NTLLIMTSNVGSS-VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPE----FL 576
NT++IMTSN+GS + E GG D D + +R+ + + F +
Sbjct: 718 NTIIIMTSNIGSQYIFEYGG-------DDDRYEEILSRVMEAMLSNFRPEFLNRIDEIII 770
Query: 575 NRLDEMIVFRQLTKLEVKEIADIMLKEVVVRLRTRRLSF 459
+ R++ K++ + + +++ ++L L F
Sbjct: 771 FHSLQKAQLREIVKIQTHRLESRLARKMSLKLSDAALDF 809
>sp|Q72IK9|CLPB_THET2 Chaperone protein clpB OS=Thermus thermophilus (strain
HB27 / ATCC BAA-163 / DSM 7039) GN=clpB PE=3 SV=1
Length = 854
Score = 296 bits (756), Expect = 3e-079
Identities = 140/198 (70%), Positives = 173/198 (87%)
Frame = -3
Query: 1280 VTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVG 1101
VTE DI IVS WTGIPV K+ E +LL++E+ LH RV+GQDEA++A++ AIRRAR G
Sbjct: 521 VTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG 580
Query: 1100 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 921
LK+PNRPI SF+F GPTGVGK+ELAK LAA F +EEAMIR+DM+E+ME+H VS+LIG+P
Sbjct: 581 LKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAP 640
Query: 920 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 741
PGYVGY EGGQLTEAVRRRPY+++LFDEIEKAHPDVFN++LQIL+DGRLTDS GRTVDF+
Sbjct: 641 PGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFR 700
Query: 740 NTLLIMTSNVGSSVIEKG 687
NT++I+TSN+GS +I +G
Sbjct: 701 NTVIILTSNLGSPLILEG 718
>sp|Q9RA63|CLPB_THET8 Chaperone protein clpB OS=Thermus thermophilus (strain HB8
/ ATCC 27634 / DSM 579) GN=clpB PE=1 SV=2
Length = 854
Score = 296 bits (756), Expect = 3e-079
Identities = 140/198 (70%), Positives = 173/198 (87%)
Frame = -3
Query: 1280 VTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVG 1101
VTE DI IVS WTGIPV K+ E +LL++E+ LH RV+GQDEA++A++ AIRRAR G
Sbjct: 521 VTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG 580
Query: 1100 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 921
LK+PNRPI SF+F GPTGVGK+ELAK LAA F +EEAMIR+DM+E+ME+H VS+LIG+P
Sbjct: 581 LKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAP 640
Query: 920 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 741
PGYVGY EGGQLTEAVRRRPY+++LFDEIEKAHPDVFN++LQIL+DGRLTDS GRTVDF+
Sbjct: 641 PGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFR 700
Query: 740 NTLLIMTSNVGSSVIEKG 687
NT++I+TSN+GS +I +G
Sbjct: 701 NTVIILTSNLGSPLILEG 718
>sp|P53533|CLPB1_SYNE7 Chaperone protein clpB 1 OS=Synechococcus elongatus
(strain PCC 7942) GN=clpB1 PE=2 SV=3
Length = 874
Score = 294 bits (752), Expect = 1e-078
Identities = 140/195 (71%), Positives = 170/195 (87%)
Frame = -3
Query: 1280 VTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVG 1101
VTE DI I+S WTGIPV K+ E +LL +++ LH RVIGQ+EAV A++ AI+R+R G
Sbjct: 537 VTEVDIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIGQEEAVSAVADAIQRSRAG 596
Query: 1100 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 921
L +P RPIASFIF GPTGVGK+ELAKALAAY F +E+AMIR+DMSE+ME+H VS+LIG+P
Sbjct: 597 LSDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAP 656
Query: 920 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 741
PGYVGY EGGQLTEAVRRRPY+++LFDEIEKAHPDVFN+MLQIL+DGR+TDS+GRTVDFK
Sbjct: 657 PGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFK 716
Query: 740 NTLLIMTSNVGSSVI 696
NT+LI+TSN+GS I
Sbjct: 717 NTILILTSNIGSQYI 731
>sp|Q7X2S8|CLPB_MEIRU Chaperone protein clpB OS=Meiothermus ruber GN=clpB PE=3
SV=1
Length = 854
Score = 292 bits (745), Expect = 6e-078
Identities = 137/200 (68%), Positives = 171/200 (85%)
Frame = -3
Query: 1286 PNVTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRAR 1107
P VTE DI IVS WTGIPV K+ E +LL++E LH RV+GQDEA+ A++ AIRRAR
Sbjct: 519 PMVTEEDIAAIVSRWTGIPVAKLMEGEREKLLRLEDELHKRVVGQDEAIVAVADAIRRAR 578
Query: 1106 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 927
GLK+PNRPI SF+F GPTGVGK+ELAK LAA F +EE M+R+DMSE+ E+HTV++LIG
Sbjct: 579 AGLKDPNRPIGSFLFLGPTGVGKTELAKTLAASLFDTEENMVRIDMSEYQEKHTVARLIG 638
Query: 926 SPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 747
+PPGYVGY EGGQLTEAVRRRPY+++LFDEIEKAHPDVFN++LQ+L+DGRLTD +GRTVD
Sbjct: 639 APPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVD 698
Query: 746 FKNTLLIMTSNVGSSVIEKG 687
F+NT++I+TSN+GS +I +G
Sbjct: 699 FRNTVIILTSNIGSPLIFEG 718
>sp|Q7NFE9|CLPB_GLOVI Chaperone protein clpB OS=Gloeobacter violaceus GN=clpB
PE=3 SV=1
Length = 872
Score = 288 bits (736), Expect = 7e-077
Identities = 138/210 (65%), Positives = 174/210 (82%), Gaps = 3/210 (1%)
Frame = -3
Query: 1280 VTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVG 1101
VTE DI I+S WTGIPV K+ + E +LL +E LH RV+GQ+EAV+ +S AI+R+R G
Sbjct: 538 VTEEDIAEIISKWTGIPVSKLVASEREKLLHLEDELHKRVVGQEEAVRIVSEAIQRSRAG 597
Query: 1100 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 921
L +PNRPIASFIF GPTGVGK+ELAKALA++ F E AM+R+DMSE+ME+H+VS+LIG+P
Sbjct: 598 LADPNRPIASFIFLGPTGVGKTELAKALASFLFDDENAMVRIDMSEYMEKHSVSRLIGAP 657
Query: 920 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 741
PGYVGY EGGQLTEAVRRRPY +VLFDEIEKAH DVFN++LQ+L+DGR+TDS+GRT+DFK
Sbjct: 658 PGYVGYDEGGQLTEAVRRRPYAVVLFDEIEKAHNDVFNVLLQVLDDGRITDSQGRTIDFK 717
Query: 740 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 651
N ++IMTSN+GS I + G G D Y++
Sbjct: 718 NAVIIMTSNIGSDAILRLG---GNDAYYEQ 744
>sp|Q74X11|CLPB_YERPE Chaperone protein clpB OS=Yersinia pestis GN=clpB PE=3
SV=2
Length = 857
Score = 287 bits (733), Expect = 2e-076
Identities = 130/197 (65%), Positives = 171/197 (86%)
Frame = -3
Query: 1280 VTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVG 1101
VTE ++ +++ WTGIPV ++ E +LL+MEQ LH RVIGQDEAV+A+S AIRR+R G
Sbjct: 531 VTEIEVAEVLARWTGIPVSRMLKSERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAG 590
Query: 1100 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 921
L +PNRPI SF+F GPTGVGK+EL KALA + F S++AM+R+DMSEFME+H+VS+L+G+P
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 920 PGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 741
PGYVGY EGG LTEAVRRRPY+++L DE+EKAHPDVFN++LQ+L+DGRLTD +GRTVDF+
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710
Query: 740 NTLLIMTSNVGSSVIEK 690
NT++IMTSN+GS +I++
Sbjct: 711 NTVVIMTSNLGSDLIQE 727
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,872,592,117
Number of Sequences: 518415
Number of Extensions: 81872592117
Number of Successful Extensions: 541474699
Number of sequences better than 0.0: 0
|
