BLASTX 7.6.2
Query= UN19955 /QuerySize=861
(860 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G25040.1 | Symbols: | integral membrane famil... 264 5e-071
TAIR9_protein||AT4G03540.1 | Symbols: | integral membrane famil... 101 1e-021
TAIR9_protein||AT1G03700.1 | Symbols: | FUNCTIONS IN: molecular... 88 7e-018
TAIR9_protein||AT2G36100.1 | Symbols: | integral membrane famil... 69 3e-012
TAIR9_protein||AT5G06200.1 | Symbols: | integral membrane famil... 67 1e-011
TAIR9_protein||AT3G11550.1 | Symbols: | integral membrane famil... 62 5e-010
TAIR9_protein||AT1G17200.1 | Symbols: | integral membrane famil... 55 4e-008
>TAIR9_protein||AT4G25040.1 | Symbols: | integral membrane family protein |
chr4:12868320-12869319 FORWARD
Length = 171
Score = 264 bits (674), Expect = 5e-071
Identities = 133/168 (79%), Positives = 148/168 (88%), Gaps = 1/168 (0%)
Frame = -3
Query: 690 IMGDNEGKRT-LMNLKVQVSMRVLTVGAALASMGLMITNREVASVYGIAFEAKYSDSSAF 514
+MGDNEG+RT L+NL VQVSMRVLT+GAA+ASM +MITNREVASVYGIAFEAKYS SSAF
Sbjct: 1 MMGDNEGRRTPLLNLGVQVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAF 60
Query: 513 RYLVYAYIAIAAVTLFTLAWACLAVRRGGFIFALFVIDLLMALTALSAFSASMSEGYIGK 334
RYLVYA IA+ A TLFTL WACLAVRR G +FALF DLL LTA+SAFSA+ +EGY+GK
Sbjct: 61 RYLVYAQIAVCAATLFTLVWACLAVRRRGLVFALFFFDLLTTLTAISAFSAAFAEGYVGK 120
Query: 333 YGNTHAGWLPICGYVHNYCNRVTLSLAFSFVSFLLLFILTVLTASAAR 190
YGN AGWLPICGYVH YC+RVT+SLA SF SF+LLFILTVLTASAAR
Sbjct: 121 YGNKQAGWLPICGYVHGYCSRVTISLAMSFASFILLFILTVLTASAAR 168
>TAIR9_protein||AT4G03540.1 | Symbols: | integral membrane family protein |
chr4:1570042-1571483 FORWARD
Length = 165
Score = 101 bits (249), Expect = 1e-021
Identities = 58/142 (40%), Positives = 93/142 (65%), Gaps = 5/142 (3%)
Frame = -3
Query: 633 MRVLTVGAALASMGLMITNREVASVYGIAFEAKYSDSSAFRYLVYAYIAIAAVTLFTLAW 454
+R+ GAALA++ +MIT+RE AS I+ EAKY+D +AF+Y V IA A V++++
Sbjct: 13 LRLAAFGAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFV---IANAVVSVYSFLV 69
Query: 453 ACLAVRRGGFIFALFVIDLLMALTALSAFSASMSEGYIGKYGNTHAGWLPICGYVHNYCN 274
L + F + V+DL+M + S+ SA+++ +GK GN +AGWLPICG V +C+
Sbjct: 70 LFLPKESLLWKFVV-VLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQVPKFCD 128
Query: 273 RVTLSLAFSFVSFLLLFILTVL 208
++T +L FV+ L+L++L +L
Sbjct: 129 QITGALIAGFVA-LVLYVLLLL 149
>TAIR9_protein||AT1G03700.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: hypocotyl, flower; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0497, trans-membrane plant
(InterPro:IPR006702), Uncharacterised protein family UPF0497,
trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis
thaliana protein match is: integral membrane family protein
(TAIR:AT4G03540.1); Has 260 Blast hits to 260 proteins in 13 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:921038-921844
FORWARD
Length = 165
Score = 88 bits (216), Expect = 7e-018
Identities = 52/143 (36%), Positives = 85/143 (59%), Gaps = 4/143 (2%)
Frame = -3
Query: 633 MRVLTVGAALASMGLMITNREVASVYGIAFEAKYSDSSAFRYLVYAYIAIAAVTLFTLAW 454
+R AAL ++ MIT+RE +S + I+ AKYSD +AF+Y V IA A VT+++
Sbjct: 13 LRFAAFCAALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFV---IANAIVTVYSFLV 69
Query: 453 ACLAVRRGGFIFALFVIDLLMALTALSAFSASMSEGYIGKYGNTHAGWLPICGYVHNYCN 274
L + F + V+DL++ + S+ SA+++ +GK GN +AGWLPICG V +C+
Sbjct: 70 LFLPKESLLWKFVV-VLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQVPRFCD 128
Query: 273 RVTLSLAFSFVSFLLLFILTVLT 205
++T +L V+ +L L + +
Sbjct: 129 QITGALIAGLVALVLYVFLLIFS 151
>TAIR9_protein||AT2G36100.1 | Symbols: | integral membrane family protein |
chr2:15159744-15160669 REVERSE
Length = 207
Score = 69 bits (168), Expect = 3e-012
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Frame = -3
Query: 633 MRVLTVGAALASMGLMITNREVASVYG--IAFEAKYSDSSAFRYLVYAYIAIAAVTLFTL 460
+R+ + + + +M T E + + F+A Y D AF+Y V A +A+ + +L
Sbjct: 52 LRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVAVVASYLVLSL 111
Query: 459 AWACLAVRRGGFI---FALFVIDLLMALTALSAFSASMSEGYIGKYGNTHAGWLPICGYV 289
++ +++ R + L + D L+ SA +A+ S Y+ GN WLPIC
Sbjct: 112 PFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQF 171
Query: 288 HNYCNRVTLSLAFSFVSFLLLFILTVLTASAARR 187
++C V+ ++ ++ L +L +++A A +R
Sbjct: 172 GDFCQNVSTAVVADSIAILFFIVLIIISAIALKR 205
>TAIR9_protein||AT5G06200.1 | Symbols: | integral membrane family protein |
chr5:1877333-1878116 FORWARD
Length = 203
Score = 67 bits (163), Expect = 1e-011
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Frame = -3
Query: 633 MRVLTVGAALASMGLMITNREVASVYG--IAFEAKYSDSSAFRYLVYAYIAIAAVTLFTL 460
+R+ + AALA+ M T+ E + + FEA Y D F++ V A +A + +L
Sbjct: 48 LRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSL 107
Query: 459 AWACLAVRRGGFI---FALFVIDLLMALTALSAFSASMSEGYIGKYGNTHAGWLPICGYV 289
++ + + R + L V+D +A SA+ + Y+ GNT+ WLPIC
Sbjct: 108 PFSVVTIVRPLAVAPRLLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQF 167
Query: 288 HNYCNRVTLSLAFSFVSFLLLFILTVLTASAARR 187
++C + + ++ +F S L IL V++ + +R
Sbjct: 168 GDFCQKTSGAVVSAFASVTFLAILVVISGVSLKR 201
>TAIR9_protein||AT3G11550.1 | Symbols: | integral membrane family protein |
chr3:3638262-3639052 FORWARD
Length = 205
Score = 62 bits (148), Expect = 5e-010
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Frame = -3
Query: 633 MRVLTVGAALASMGLMITNREVASVYG--IAFEAKYSDSSAFRYLVYAYIAIAAVTLFTL 460
+R+ + AALA+ M T+ E + + FEA Y D F++ V A + + +L
Sbjct: 50 LRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALVGGYLVLSL 109
Query: 459 AWACLAVRR---GGFIFALFVIDLLMALTALSAFSASMSEGYIGKYGNTHAGWLPICGYV 289
+ + + R L V+D + +A S++ + Y+ GN + WLPIC
Sbjct: 110 PISVVTILRPLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQF 169
Query: 288 HNYCNRVTLSLAFSFVSFLLLFILTVLTASAARR 187
++C + + ++ +FVS + IL V++ A +R
Sbjct: 170 GDFCQKSSGAVVSAFVSVVFFTILVVISGVALKR 203
>TAIR9_protein||AT1G17200.1 | Symbols: | integral membrane family protein |
chr1:5878493-5879871 FORWARD
Length = 205
Score = 55 bits (132), Expect = 4e-008
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Frame = -3
Query: 642 QVSMRVLTVGAALASMGLMITNREVASVYGIAFEAKYSDSSAFRYLVYAYIAIAAVTLFT 463
+ +R+ VG +A++ +M+ + E I+ YS+ +AFRYLV+A A +L +
Sbjct: 34 ETMLRLAPVGLCVAALVVMLKDSETNEFGSIS----YSNLTAFRYLVHANGICAGYSLLS 89
Query: 462 LAWACLAVRRGGF--IFALFVIDLLMALTALSAFSASMSEGYIGKYGNTHAGWLPICGYV 289
A A + ++ F +D L+ L+A + S Y+ G++ W C
Sbjct: 90 AAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSY 149
Query: 288 HNYCNRVTLSLAFSFVSFLLLFILTVLTA 202
+C+R T S+ +F +L+++++
Sbjct: 150 GGFCHRATASVIITFFVVCFYIVLSLISS 178
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,372,867,301
Number of Sequences: 33410
Number of Extensions: 10372867301
Number of Successful Extensions: 348709919
Number of sequences better than 0.0: 0
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