BLASTX 7.6.2
Query= UN20027 /QuerySize=960
(959 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G13930.1 | Symbols: | Involved in response to... 177 1e-044
TAIR9_protein||AT2G03440.1 | Symbols: | nodulin-related | chr2:... 141 8e-034
TAIR9_protein||AT2G06520.1 | Symbols: PSBX | PSBX (photosystem I... 138 9e-033
>TAIR9_protein||AT1G13930.1 | Symbols: | Involved in response to salt stress.
Knockout mutants are hypersensitive to salt stress. |
chr1:4761091-4761558 FORWARD
Length = 156
Score = 177 bits (448), Expect = 1e-044
Identities = 89/108 (82%), Positives = 97/108 (89%), Gaps = 2/108 (1%)
Frame = +3
Query: 18 PEEPDHNKPAEGTETTNRPASSSELMASAKVVAEAAQAAARNESDKLDKAKVAGASADIL 197
PEEPDHNKP EGTET RPA+++ELMASAKVVAEAAQAAARNESDKLDK KVAGASADIL
Sbjct: 16 PEEPDHNKPVEGTETATRPATNAELMASAKVVAEAAQAAARNESDKLDKGKVAGASADIL 75
Query: 198 DAAQKYGKLDEKSGTGQYLEKAEKYLNDFESSHSSGAAG--TPTNQLE 335
DAA+KYGK DEKS TGQYL+KAEKYLND+ESSHS+GA G PT+Q E
Sbjct: 76 DAAEKYGKFDEKSSTGQYLDKAEKYLNDYESSHSTGAGGPPPPTSQAE 123
>TAIR9_protein||AT2G03440.1 | Symbols: | nodulin-related | chr2:1039409-1039972
REVERSE
Length = 188
Score = 141 bits (354), Expect = 8e-034
Identities = 71/98 (72%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
Frame = +3
Query: 24 EPDHNKPAEGTE-TTNRPASSSELMASAKVVAEAAQAAARNESDKLDKAKVAGASADILD 200
EP +KP T+ TT+RPA+++ELMASAK+VAEAAQAAAR+ESDKLDKAKVAGA+ADILD
Sbjct: 45 EPTTHKPVSNTDPTTHRPATNAELMASAKIVAEAAQAAARHESDKLDKAKVAGATADILD 104
Query: 201 AAQKYGKLDEKSGTGQYLEKAEKYLNDFESSHSSGAAG 314
AA +YGKLDEKSG GQYLEKAE+YL+ +E+SHS + G
Sbjct: 105 AASRYGKLDEKSGVGQYLEKAEQYLHKYETSHSHSSTG 142
>TAIR9_protein||AT2G06520.1 | Symbols: PSBX | PSBX (photosystem II subunit X) |
chr2:2587868-2588218 REVERSE
Length = 117
Score = 138 bits (345), Expect = 9e-033
Identities = 74/105 (70%), Positives = 87/105 (82%), Gaps = 3/105 (2%)
Frame = +2
Query: 416 SSAKTIAFLKPLPLKPSKASSFSVAMPSRKFQVNASNLKMEKAVSGLAAAALTVSMVIPE 595
+ ++ FLKPLPLKPSKA VA R ++ LKM+KA++G++AAALT SMVIPE
Sbjct: 14 NQTRSSPFLKPLPLKPSKA---LVATGGRAQRLQVKALKMDKALTGISAAALTASMVIPE 70
Query: 596 VAEAAGSGISPSLKNFLLSIAAGGVVLTVIIGVVVGVSNFDPVKR 730
+AEAAGSGISPSLKNFLLSIA+GG+VLTVIIGVVVGVSNFDPVKR
Sbjct: 71 IAEAAGSGISPSLKNFLLSIASGGLVLTVIIGVVVGVSNFDPVKR 115
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,459,653,557
Number of Sequences: 33410
Number of Extensions: 10459653557
Number of Successful Extensions: 353860551
Number of sequences better than 0.0: 0
|