BLASTX 7.6.2
Query= UN20028 /QuerySize=760
(759 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G20570.1 | Symbols: ROC1, RBX1, HRT1, ATRBX1 |... 234 5e-062
TAIR9_protein||AT3G42830.1 | Symbols: | ring-box protein Roc1/R... 212 3e-055
TAIR9_protein||AT5G20570.3 | Symbols: ROC1, RBX1, HRT1, ATRBX1 |... 166 1e-041
TAIR9_protein||AT5G20570.2 | Symbols: ROC1, RBX1, HRT1, ATRBX1 |... 149 2e-036
TAIR9_protein||AT3G05870.1 | Symbols: APC11 | APC11; protein bin... 54 9e-008
>TAIR9_protein||AT5G20570.1 | Symbols: ROC1, RBX1, HRT1, ATRBX1 | RBX1 (RING-BOX
1); protein binding | chr5:6956905-6958221 REVERSE
Length = 119
Score = 234 bits (596), Expect = 5e-062
Identities = 107/119 (89%), Positives = 112/119 (94%), Gaps = 2/119 (1%)
Frame = +2
Query: 131 MASLDSDVNMVPAGEPSA--PSSSSAKKAKRFEVKKWSAVALWAWDIVVDNCAICRNHIM 304
MA+LDSDV M+PAGE S+ +SSS KKAKRFE+KKWSAVALWAWDIVVDNCAICRNHIM
Sbjct: 1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIM 60
Query: 305 DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH* 481
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH*
Sbjct: 61 DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH* 119
>TAIR9_protein||AT3G42830.1 | Symbols: | ring-box protein Roc1/Rbx1/Hrt1,
putative | chr3:14929714-14930678 REVERSE
Length = 116
Score = 212 bits (538), Expect = 3e-055
Identities = 99/116 (85%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
Frame = +2
Query: 134 ASLDSDVNMVPAGEPSAPSSSSAKKAKRFEVKKWSAVALWAWDIVVDNCAICRNHIMDLC 313
ASL+SDV M + S PSSSS K +KRFE+KKWSAVALWAWDIVVDNCAICRNHIMDLC
Sbjct: 2 ASLNSDVIMGESSSISVPSSSS-KNSKRFELKKWSAVALWAWDIVVDNCAICRNHIMDLC 60
Query: 314 IECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH* 481
IEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLD EWEFQKYGH*
Sbjct: 61 IECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDVCEWEFQKYGH* 116
>TAIR9_protein||AT5G20570.3 | Symbols: ROC1, RBX1, HRT1, ATRBX1 | RBX1 (RING-BOX
1); protein binding | chr5:6956905-6958221 REVERSE
Length = 137
Score = 166 bits (420), Expect = 1e-041
Identities = 72/73 (98%)
Frame = +2
Query: 263 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 442
IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 65 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 124
Query: 443 DNSEWEFQKYGH* 481
DNSEWEFQKYGH*
Sbjct: 125 DNSEWEFQKYGH* 137
Score = 70 bits (170), Expect = 1e-012
Identities = 34/45 (75%), Positives = 39/45 (86%), Gaps = 2/45 (4%)
Frame = +2
Query: 131 MASLDSDVNMVPAGEPSA--PSSSSAKKAKRFEVKKWSAVALWAW 259
MA+LDSDV M+PAGE S+ +SSS KKAKRFE+KKWSAVALWAW
Sbjct: 1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAW 45
>TAIR9_protein||AT5G20570.2 | Symbols: ROC1, RBX1, HRT1, ATRBX1 | RBX1 (RING-BOX
1); protein binding | chr5:6956905-6958221 REVERSE
Length = 143
Score = 149 bits (375), Expect = 2e-036
Identities = 71/82 (86%), Positives = 76/82 (92%), Gaps = 2/82 (2%)
Frame = +2
Query: 131 MASLDSDVNMVPAGEPSA--PSSSSAKKAKRFEVKKWSAVALWAWDIVVDNCAICRNHIM 304
MA+LDSDV M+PAGE S+ +SSS KKAKRFE+KKWSAVALWAWDIVVDNCAICRNHIM
Sbjct: 1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIM 60
Query: 305 DLCIECQANQASATSEECTVAW 370
DLCIECQANQASATSEECTVAW
Sbjct: 61 DLCIECQANQASATSEECTVAW 82
Score = 90 bits (221), Expect = 2e-018
Identities = 36/37 (97%)
Frame = +2
Query: 371 GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH* 481
GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH*
Sbjct: 107 GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH* 143
>TAIR9_protein||AT3G05870.1 | Symbols: APC11 | APC11; protein binding /
ubiquitin-protein ligase/ zinc ion binding | chr3:1754463-1754802
FORWARD
Length = 58
Score = 54 bits (128), Expect = 9e-008
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Frame = +2
Query: 350 EECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 469
++C + WG CNHAFH HCI +W+ ++ CP+ EW+F++
Sbjct: 15 DDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 57
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,459,653,557
Number of Sequences: 33410
Number of Extensions: 10459653557
Number of Successful Extensions: 353860551
Number of sequences better than 0.0: 0
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