BLASTX 7.6.2
Query= UN20054 /QuerySize=896
(895 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G40690.1 | Symbols: | INVOLVED IN: biological... 367 5e-102
TAIR9_protein||AT2G41730.1 | Symbols: | unknown protein | chr2:... 69 5e-012
TAIR9_protein||AT3G10810.1 | Symbols: | zinc finger (C3HC4-type... 64 2e-010
TAIR9_protein||AT5G24640.1 | Symbols: | unknown protein | chr5:... 60 2e-009
TAIR9_protein||AT4G26600.1 | Symbols: | nucleolar protein, puta... 50 2e-006
>TAIR9_protein||AT5G40690.1 | Symbols: | INVOLVED IN: biological_process
unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth
stages; CONTAINS InterPro DOMAIN/s: EF-HAND 1 (InterPro:IPR018247);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G41730.1); Has 208 Blast hits to 177 proteins in 46 species:
Archae - 0; Bacteria - 4; Metazoa - 51; Fungi - 25; Plants - 42;
Viruses - 6; Other Eukaryotes - 80 (source: NCBI BLink). |
chr5:16290770-16291402 FORWARD
Length = 211
Score = 367 bits (942), Expect = 5e-102
Identities = 178/218 (81%), Positives = 194/218 (88%), Gaps = 8/218 (3%)
Frame = -3
Query: 830 MKREGKQHGMVRTYRILPPSLNPRPQAKLVNPLTCRPTAGLFTKVSSKPTNHSKFTGKCG 651
MKREGKQHGMVRTYRILPPSLNPRP++KLVNPLT RPTAGLFTKV+SKPTNHSKFTGKCG
Sbjct: 1 MKREGKQHGMVRTYRILPPSLNPRPESKLVNPLTSRPTAGLFTKVTSKPTNHSKFTGKCG 60
Query: 650 QARCLECHMHPITKSKVKSKGSSKVRSNDITYKMLTWQVASGGHRPGLKLSGFSATGLLD 471
QARCL+CHMHP+TKSK K+KGSSKVR+ND+TYKMLTWQVA+GG RPGLKLSGFSATG+LD
Sbjct: 61 QARCLDCHMHPVTKSKAKTKGSSKVRTNDVTYKMLTWQVAAGGPRPGLKLSGFSATGILD 120
Query: 470 LMSDDYGYDHDYESDEEEEEEEEEEEYTGCVVEEIVNIQSGGD-GEKEEDGSLDDDVDDD 294
LMSDDYGYDHDY+ DEE EEEE G VVEE+VNIQS D GE EE+GS D DDD
Sbjct: 121 LMSDDYGYDHDYDYDEENEEEENR----GSVVEEVVNIQSSDDGGETEEEGSND---DDD 173
Query: 293 DDDDDGRMSFCDVGVMMMVDHVEVFDEGWCLVEEMMT* 180
D DDDGRMSFCDVG+MMM+DHVE +DEGW LVEEMMT*
Sbjct: 174 DTDDDGRMSFCDVGMMMMMDHVEEYDEGWYLVEEMMT* 211
>TAIR9_protein||AT2G41730.1 | Symbols: | unknown protein |
chr2:17409488-17409847 FORWARD
Length = 120
Score = 69 bits (166), Expect = 5e-012
Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = -3
Query: 821 EGKQHGMVRTYRILPPSLNPRPQAKLVNPLTCRPTAGLFTKVSSKPTNHSKFTGKCGQAR 642
EG+ G+VRT I P NPRP + N L P G FTKV SK TNHS TG+ +++
Sbjct: 4 EGRHQGIVRTGMIHPRGFNPRPTS---NRLDSPPAFGDFTKVPSKTTNHSNTTGESERSK 60
Query: 641 CLECHMHPITKSKVKSKGSSKVR 573
CH+ P KS KSKG K++
Sbjct: 61 YSHCHVSPAIKSGHKSKGRRKLQ 83
>TAIR9_protein||AT3G10810.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:3381848-3384227 REVERSE
Length = 497
Score = 64 bits (153), Expect = 2e-010
Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 18/100 (18%)
Frame = +2
Query: 86 IDNNRSSPNLLKQFT------KAKG---NTMIWGNKSKRSVKSSFLQPNTILHQILPHDQ 238
+ + SSP LKQ T ++K N I+G K K+ SSFL ++ P
Sbjct: 267 VGTSNSSPR-LKQLTDTITGSRSKNLGLNNTIFG-KVKQVRLSSFLPNSSDSSTKSPSPS 324
Query: 239 PSSSPPHHKNSSFHHHHHHHHQHHHQETHLLPFHHHHHSV 358
PS PH K+ HHHHHHHH HHH H HHHHH++
Sbjct: 325 PS---PHSKHHHHHHHHHHHHHHHHHNHH----HHHHHNL 357
>TAIR9_protein||AT5G24640.1 | Symbols: | unknown protein | chr5:8436404-8436760
FORWARD
Length = 119
Score = 60 bits (144), Expect = 2e-009
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = -3
Query: 818 GKQHGMVRTYRILPPSLNPRPQAKLVNPLTCRPTAGLFTKVSSKPTNHSKFTGKCGQARC 639
G+ G+VRT I P NPR +L +P P G FTK+ K TNHS G+ +++
Sbjct: 5 GRHQGVVRTGMIHPRGFNPRHTNRLDSP----PVFGDFTKMQPKTTNHSNIIGESERSKY 60
Query: 638 LECHMHPITKSKVKSKGSSKVR 573
CH+ P KS KSKG K++
Sbjct: 61 SNCHVSPAIKSGHKSKGRRKLQ 82
>TAIR9_protein||AT4G26600.1 | Symbols: | nucleolar protein, putative |
chr4:13419629-13423418 FORWARD
Length = 672
Score = 50 bits (118), Expect = 2e-006
Identities = 27/54 (50%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = -3
Query: 440 DYESDEEEEEEEEEEEYTGCVVEEIVNIQSGGDGEKEEDGSLDDDVDDDDDDDD 279
+ +DEEEEEEE E+ G E ++ S GD E D DDD DDDDDDDD
Sbjct: 56 EVSTDEEEEEEENEQSDEGS--ESGSDLFSDGDEEGNNDSDDDDDDDDDDDDDD 107
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,459,653,557
Number of Sequences: 33410
Number of Extensions: 10459653557
Number of Successful Extensions: 353860551
Number of sequences better than 0.0: 0
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