BLASTX 7.6.2
Query= UN20060 /QuerySize=873
(872 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G63030.1 | Symbols: MBD4 | MBD4; DNA binding /... 300 1e-081
TAIR9_protein||AT4G22745.1 | Symbols: MBD1 | MBD1; DNA binding /... 218 4e-057
TAIR9_protein||AT5G35330.1 | Symbols: MBD02, MBD2, ATMBD2 | MBD0... 119 3e-027
TAIR9_protein||AT5G35330.2 | Symbols: MBD02, MBD2 | MBD02 (METHY... 119 3e-027
TAIR9_protein||AT4G00416.1 | Symbols: MBD3 | MBD3; DNA binding /... 110 1e-024
>TAIR9_protein||AT3G63030.1 | Symbols: MBD4 | MBD4; DNA binding / DNA
demethylase/ methyl-CpG binding | chr3:23295394-23296425 FORWARD
Length = 187
Score = 300 bits (766), Expect = 1e-081
Identities = 137/164 (83%), Positives = 153/164 (93%)
Frame = -2
Query: 799 EEENGSVAKPRAKKDVAAGRLIDTYAAQCENCHQWRVIDSQEEYEDIRSRMIDDPFTCDK 620
EEE G AKP+AKKDVA GRLIDTYAAQC+NCH+WRVIDSQEEYEDIRS+M++DPF C K
Sbjct: 4 EEEIGKPAKPKAKKDVAPGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQK 63
Query: 619 KKQVSCEDPADLDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLR 440
K+ +SCE+PAD+DYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLR
Sbjct: 64 KQGMSCEEPADIDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLR 123
Query: 439 SRNEVASYVEANPEFKGAPLEDFSFTVPKVMEDTFPPDPKVASP 308
SRNE+A++VEANPEF+ APL DF+FTVPKVMEDT PPDPK+ SP
Sbjct: 124 SRNEIAAFVEANPEFRNAPLGDFNFTVPKVMEDTVPPDPKLGSP 167
>TAIR9_protein||AT4G22745.1 | Symbols: MBD1 | MBD1; DNA binding / DNA
demethylase/ methyl-CpG binding | chr4:11947421-11948514 REVERSE
Length = 205
Score = 218 bits (555), Expect = 4e-057
Identities = 103/160 (64%), Positives = 126/160 (78%), Gaps = 4/160 (2%)
Frame = -2
Query: 799 EEENGSVAKPRA----KKDVAAGRLIDTYAAQCENCHQWRVIDSQEEYEDIRSRMIDDPF 632
EE+ A+P KK GR ID +A QCE C +WR ID+Q+EYEDIRSR+ +DPF
Sbjct: 27 EEQTEKSAEPTTIKVQKKAGTPGRSIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPF 86
Query: 631 TCDKKKQVSCEDPADLDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTG 452
C K+ VSCED DL+YDSSRTWVIDKPGLP+TP+GFKRSL+LRKDYSKMD YY TPTG
Sbjct: 87 FCKTKEGVSCEDVGDLNYDSSRTWVIDKPGLPRTPRGFKRSLILRKDYSKMDAYYITPTG 146
Query: 451 KKLRSRNEVASYVEANPEFKGAPLEDFSFTVPKVMEDTFP 332
KKL+SRNE+A++++AN ++K A L DF+FTVPKVME+T P
Sbjct: 147 KKLKSRNEIAAFIDANQDYKYALLGDFNFTVPKVMEETVP 186
>TAIR9_protein||AT5G35330.1 | Symbols: MBD02, MBD2, ATMBD2 | MBD02
(METHYL-CPG-BINDING DOMAIN PROTEIN 02); DNA binding / DNA demethylase |
chr5:13523725-13525270 REVERSE
Length = 273
Score = 119 bits (297), Expect = 3e-027
Identities = 56/142 (39%), Positives = 87/142 (61%), Gaps = 8/142 (5%)
Frame = -2
Query: 736 IDTYAAQCENCHQWRVIDSQEEYEDIRSRMIDDPFTCDK----KKQVSCEDPADLDYDSS 569
I + QC +C +WR++ S ++YE+IR +++++PF CD K +SC+ PAD+ D +
Sbjct: 56 IGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGT 115
Query: 568 RTWVIDKPGLPKTPKGFKRSLVLRKDYSK--MDTYYFTPTGKKLRSRNEVASYVEANPEF 395
R W IDKP + + P G++R L +R + D YY P+GKKLRS EV Y+ N E+
Sbjct: 116 RLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEY 175
Query: 394 --KGAPLEDFSFTVPKVMEDTF 335
+G L FSF +PK ++D +
Sbjct: 176 IGEGVKLSQFSFQIPKPLQDDY 197
>TAIR9_protein||AT5G35330.2 | Symbols: MBD02, MBD2 | MBD02 (METHYL-CPG-BINDING
DOMAIN PROTEIN 02); DNA binding / DNA demethylase |
chr5:13523725-13525270 REVERSE
Length = 273
Score = 119 bits (297), Expect = 3e-027
Identities = 56/142 (39%), Positives = 87/142 (61%), Gaps = 8/142 (5%)
Frame = -2
Query: 736 IDTYAAQCENCHQWRVIDSQEEYEDIRSRMIDDPFTCDK----KKQVSCEDPADLDYDSS 569
I + QC +C +WR++ S ++YE+IR +++++PF CD K +SC+ PAD+ D +
Sbjct: 56 IGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGT 115
Query: 568 RTWVIDKPGLPKTPKGFKRSLVLRKDYSK--MDTYYFTPTGKKLRSRNEVASYVEANPEF 395
R W IDKP + + P G++R L +R + D YY P+GKKLRS EV Y+ N E+
Sbjct: 116 RLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEY 175
Query: 394 --KGAPLEDFSFTVPKVMEDTF 335
+G L FSF +PK ++D +
Sbjct: 176 IGEGVKLSQFSFQIPKPLQDDY 197
>TAIR9_protein||AT4G00416.1 | Symbols: MBD3 | MBD3; DNA binding / methyl-CpG
binding | chr4:179022-179513 FORWARD
Length = 164
Score = 110 bits (274), Expect = 1e-024
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 11/158 (6%)
Frame = -2
Query: 739 LIDTYAAQCENCHQWRVIDSQEEYEDIRSRMIDDPFTCDKKKQVSCEDPAD--LDYDS-S 569
LID+YAAQC C + R I+SQE+YE+IRS+ ++ F C + CE+P D +++DS +
Sbjct: 8 LIDSYAAQCWKCLKVRSIESQEDYEEIRSKTLEKFFECKR-----CEEPGDMVMNFDSLT 62
Query: 568 RTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYY--FTPTGKKLRSRNEVASYVEANPEF 395
W D+ +PKTP+G KR LV+R + K+D YY P K+ +S EVA+++E EF
Sbjct: 63 MRWFQDEHSIPKTPQGLKRVLVVRTNCVKVDVYYESLAPRRKRFKSIKEVATFIEDKEEF 122
Query: 394 KGAPLEDFSFTVPKVME-DTFPPDPKVASPPVAAKGVS 284
K LE+ SF PK ++ P D +S GVS
Sbjct: 123 KDMTLEEVSFAAPKRLKLKKKPVDSHSSSRNTEEDGVS 160
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,459,653,557
Number of Sequences: 33410
Number of Extensions: 10459653557
Number of Successful Extensions: 353860551
Number of sequences better than 0.0: 0
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