BLASTX 7.6.2
Query= UN20073 /QuerySize=1879
(1878 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G69250.1 | Symbols: | nuclear transport facto... 368 7e-102
TAIR9_protein||AT1G69250.2 | Symbols: | nuclear transport facto... 267 3e-071
TAIR9_protein||AT2G03640.1 | Symbols: | nuclear transport facto... 216 5e-056
TAIR9_protein||AT2G03640.2 | Symbols: | nuclear transport facto... 215 8e-056
TAIR9_protein||AT1G13730.1 | Symbols: | nuclear transport facto... 214 2e-055
TAIR9_protein||AT5G60980.1 | Symbols: | nuclear transport facto... 117 4e-026
TAIR9_protein||AT5G60980.2 | Symbols: | nuclear transport facto... 117 4e-026
TAIR9_protein||AT3G55540.1 | Symbols: | nuclear transport facto... 101 2e-021
TAIR9_protein||AT3G25150.1 | Symbols: | nuclear transport facto... 101 3e-021
TAIR9_protein||AT5G48650.1 | Symbols: | nuclear transport facto... 93 6e-019
TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport facto... 91 2e-018
TAIR9_protein||AT5G43960.2 | Symbols: | nuclear transport facto... 50 3e-006
TAIR9_protein||AT4G03110.1 | Symbols: | RNA-binding protein, pu... 50 4e-006
>TAIR9_protein||AT1G69250.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:26033163-26035301 FORWARD
Length = 428
Score = 368 bits (944), Expect = 7e-102
Identities = 219/443 (49%), Positives = 291/443 (65%), Gaps = 35/443 (7%)
Frame = -3
Query: 1636 AEEGGAVVHSAPHEVLSEAFVEQYYYIMGSATHEAHRLYVDGSVVTRPGGPDGSMLSFTS 1457
A EG VV SA + ++ FV QYY+++G HEA RLYVD SVV+RP G+M+SFTS
Sbjct: 2 ATEG--VVPSA--QDIAAEFVRQYYHVLGQLPHEARRLYVDASVVSRP-DVTGTMMSFTS 56
Query: 1456 LEAIKEHYLTYEYKGNTYDVLSVDSQRSLQDGIIIMVVGFLTGEDKLKRKFSQTFYLAPQ 1277
+EAI +H L+ +++ ++VLSVDSQ SL+DGI IMV+GF+TG+D +RKFSQ FYLA Q
Sbjct: 57 VEAINKHILSCDFENTKFEVLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQ 116
Query: 1276 DKAHVVVNDMYRFVDEEESS---PPTLVESEVAKPVDVI---SKTELVHMVDAPAKKSVN 1115
+ VV+NDM R+VD+E+SS P +E+ +P D + KTEL A +KSVN
Sbjct: 117 NTL-VVLNDMLRYVDQEDSSTTETPCEPVTEIVRPADGLKKAEKTELKQKNVASVEKSVN 175
Query: 1114 TAEVKKVVAAEATPPPPVTAQKPKEPIAETAAAAAADGAKKSYAAMVQSMLRNAAPFQVK 935
A K + + + E AA DGAK+S+A +V SM +NAAPFQVK
Sbjct: 176 AAVEKNAAPLDNGKMKQSEKAVITQKVTEPDAAPQPDGAKRSFADIVGSMAKNAAPFQVK 235
Query: 934 A---APAVQKPKTMAPSKGRAAPAPAASAVGKPEKKSDQRIVDEPGTSVFVSNLPMDAKA 764
+ AP VQKPK + + AAP A V K KK+DQ++++ PGTS+FV+NLP++A
Sbjct: 236 SPVQAP-VQKPKYVGQPRAAAAPQKPA-YVSKSIKKNDQKVIEVPGTSIFVANLPLNAMP 293
Query: 763 PQLYELFKAFGPIKEGGVQIRSSRASGR--CFGFVSFESVASVQSMLKAAKSNPFKLGDH 590
PQL+ELFK FGPIKE G+Q+RSSR + CFGF+SFE+VASVQS+L+AAK+ PF L D
Sbjct: 294 PQLFELFKDFGPIKENGIQVRSSRGNANPVCFGFISFETVASVQSVLQAAKNTPFMLADR 353
Query: 589 KLRVKEKQVEYDGSKQSGGRSGGGGSKAQNGSVEESKTPTGSVVDESKTPTGSADGSKSE 410
KLRVKEK+V+YDGSK S G++ GG +K QNGS + SKT GS D+SKT + DG K
Sbjct: 354 KLRVKEKEVDYDGSKPS-GKTKGGSNKTQNGSADSSKTENGS-ADDSKTNGSAEDGEKE- 410
Query: 409 NGSSAGGGEDDDGFKTIRNRKNR 341
FK +++R+NR
Sbjct: 411 -------------FKQVKSRRNR 420
Score = 233 bits (593), Expect = 4e-061
Identities = 137/281 (48%), Positives = 179/281 (63%), Gaps = 12/281 (4%)
Frame = -3
Query: 1234 DEEESSPPTLVESEVAKPVDVI---SKTELVHMVDAPAKKSVNTAEVKKVVAAEATPPPP 1064
D + P +E+ +P D + KTEL A +KSVN A K +
Sbjct: 133 DSSTTETPCEPVTEIVRPADGLKKAEKTELKQKNVASVEKSVNAAVEKNAAPLDNGKMKQ 192
Query: 1063 VTAQKPKEPIAETAAAAAADGAKKSYAAMVQSMLRNAAPFQVKA---APAVQKPKTMAPS 893
+ + E AA DGAK+S+A +V SM +NAAPFQVK+ AP VQKPK +
Sbjct: 193 SEKAVITQKVTEPDAAPQPDGAKRSFADIVGSMAKNAAPFQVKSPVQAP-VQKPKYVGQP 251
Query: 892 KGRAAPAPAASAVGKPEKKSDQRIVDEPGTSVFVSNLPMDAKAPQLYELFKAFGPIKEGG 713
+ AAP A V K KK+DQ++++ PGTS+FV+NLP++A PQL+ELFK FGPIKE G
Sbjct: 252 RAAAAPQKPA-YVSKSIKKNDQKVIEVPGTSIFVANLPLNAMPPQLFELFKDFGPIKENG 310
Query: 712 VQIRSSRASGR--CFGFVSFESVASVQSMLKAAKSNPFKLGDHKLRVKEKQVEYDGSKQS 539
+Q+RSSR + CFGF+SFE+VASVQS+L+AAK+ PF L D KLRVKEK+V+YDGSK S
Sbjct: 311 IQVRSSRGNANPVCFGFISFETVASVQSVLQAAKNTPFMLADRKLRVKEKEVDYDGSKPS 370
Query: 538 GGRSGGGGSKAQNGSVEESKTPTGSVVDESKTPTGSADGSK 416
G++ GG +K QNGS + SKT GS D+SKT + DG K
Sbjct: 371 -GKTKGGSNKTQNGSADSSKTENGS-ADDSKTNGSAEDGEK 409
>TAIR9_protein||AT1G69250.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:26033163-26035007 FORWARD
Length = 390
Score = 267 bits (680), Expect = 3e-071
Identities = 159/324 (49%), Positives = 213/324 (65%), Gaps = 17/324 (5%)
Frame = -3
Query: 1636 AEEGGAVVHSAPHEVLSEAFVEQYYYIMGSATHEAHRLYVDGSVVTRPGGPDGSMLSFTS 1457
A EG VV SA + ++ FV QYY+++G HEA RLYVD SVV+RP G+M+SFTS
Sbjct: 2 ATEG--VVPSA--QDIAAEFVRQYYHVLGQLPHEARRLYVDASVVSRP-DVTGTMMSFTS 56
Query: 1456 LEAIKEHYLTYEYKGNTYDVLSVDSQRSLQDGIIIMVVGFLTGEDKLKRKFSQTFYLAPQ 1277
+EAI +H L+ +++ ++VLSVDSQ SL+DGI IMV+GF+TG+D +RKFSQ FYLA Q
Sbjct: 57 VEAINKHILSCDFENTKFEVLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQ 116
Query: 1276 DKAHVVVNDMYRFVDEEESS---PPTLVESEVAKPVDVI---SKTELVHMVDAPAKKSVN 1115
+ VV+NDM R+VD+E+SS P +E+ +P D + KTEL A +KSVN
Sbjct: 117 NTL-VVLNDMLRYVDQEDSSTTETPCEPVTEIVRPADGLKKAEKTELKQKNVASVEKSVN 175
Query: 1114 TAEVKKVVAAEATPPPPVTAQKPKEPIAETAAAAAADGAKKSYAAMVQSMLRNAAPFQVK 935
A K + + + E AA DGAK+S+A +V SM +NAAPFQVK
Sbjct: 176 AAVEKNAAPLDNGKMKQSEKAVITQKVTEPDAAPQPDGAKRSFADIVGSMAKNAAPFQVK 235
Query: 934 A---APAVQKPKTMAPSKGRAAPAPAASAVGKPEKKSDQRIVDEPGTSVFVSNLPMDAKA 764
+ AP VQKPK + + AAP A V K KK+DQ++++ PGTS+FV+NLP++A
Sbjct: 236 SPVQAP-VQKPKYVGQPRAAAAPQKPA-YVSKSIKKNDQKVIEVPGTSIFVANLPLNAMP 293
Query: 763 PQLYELFKAFGPIKEGGVQIRSSR 692
PQL+ELFK FGPIKE G+Q+RSSR
Sbjct: 294 PQLFELFKDFGPIKENGIQVRSSR 317
>TAIR9_protein||AT2G03640.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr2:1104525-1106418 REVERSE
Length = 423
Score = 216 bits (549), Expect = 5e-056
Identities = 132/424 (31%), Positives = 230/424 (54%), Gaps = 39/424 (9%)
Frame = -3
Query: 1609 SAPHEVLSEAFVEQYYYIMGSATHEAHRLYVDGSVVTRPGGPDGSMLSFTSLEAIKEHYL 1430
S + + FV++YY + +T E H+ Y++ S+++RP G DG +++ SL+ I + +
Sbjct: 9 SVDPQFVGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRP-GLDGEIVTIKSLKGINDQIM 67
Query: 1429 TYEYKGNTYDVLSVDSQRSLQDGIIIMVVGFLTGEDKLKRKFSQTFYLAPQDKAHVVVND 1250
+ +YK + ++L+ DSQ +L++G++ +V G + G D +RKFSQ+F+L ++ ++ V+ND
Sbjct: 68 SIDYKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLND 127
Query: 1249 MYRFVDEEESSPPTLVESEVAKPVDVISKTELVHMVDAPAKKSVNT----AEVKKVVAAE 1082
+R+V +E VE E K V+ +++ + + PA +SV E K V
Sbjct: 128 TFRYVSDE------FVEPEATKEVE---ESQSTNAITEPANESVEAVIVPTEAKTTVTKP 178
Query: 1081 ATPPPPVTAQKPKEPIAE--------TAAAAAADGAKKSYAAMVQSMLRNAAPFQVKAAP 926
A+ P A+ P+E + A + KKS+A +VQS+ ++A QVKA+P
Sbjct: 179 ASAIPNGHAKVPEEKVVNENSSLPKAAEAKLQEEVPKKSFALIVQSLAQSAGTLQVKASP 238
Query: 925 AVQKPKTMAPSKGRAAPAPAASAVGKPEKKSDQRIVDEPGTSVFVSNLPMDAKAPQLYEL 746
+KP K AAP A + + + ++ G+S+FV+NLPMDA QLYE
Sbjct: 239 VKRKP----VEKPVAAPERKAPSPIRKQASAESIKPQAQGSSIFVANLPMDATIEQLYET 294
Query: 745 FKAFGPIKEGGVQIRSSRASGRCFGFVSFESVASVQSMLKAAKSNPFKLGDHKLRVKEKQ 566
FK+FG I++ G+Q+RS C GFV+FE+ +V+++ +A + +P ++G+ + ++EK+
Sbjct: 295 FKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAVKNVFQAHRESPIRIGNRRASIEEKR 354
Query: 565 VEYDGSKQSGGR---SGGGGSKAQNGSVEESKTPTGSVVDESKTPTGSADGSKSENGSSA 395
G+ Q+G R G K ++G + P GS V+ + G N S
Sbjct: 355 ---GGNNQNGNRVSTRNNSGYKNEDGFRRDGYKPRGSGVNGGR-------GYGRRNSESN 404
Query: 394 GGGE 383
G G+
Sbjct: 405 GDGK 408
>TAIR9_protein||AT2G03640.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr2:1104525-1106418 REVERSE
Length = 424
Score = 215 bits (547), Expect = 8e-056
Identities = 133/424 (31%), Positives = 227/424 (53%), Gaps = 38/424 (8%)
Frame = -3
Query: 1609 SAPHEVLSEAFVEQYYYIMGSATHEAHRLYVDGSVVTRPGGPDGSMLSFTSLEAIKEHYL 1430
S + + FV++YY + +T E H+ Y++ S+++RP G DG +++ SL+ I + +
Sbjct: 9 SVDPQFVGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRP-GLDGEIVTIKSLKGINDQIM 67
Query: 1429 TYEYKGNTYDVLSVDSQRSLQDGIIIMVVGFLTGEDKLKRKFSQTFYLAPQDKAHVVVND 1250
+ +YK + ++L+ DSQ +L++G++ +V G + G D +RKFSQ+F+L ++ ++ V+ND
Sbjct: 68 SIDYKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLND 127
Query: 1249 MYRFVDEEESSPPTLVESEVAKPVDVISKTELVHMVDAPAKKSVNT----AEVKKVVAAE 1082
+R+V +E VE E K V+ T + PA +SV E K V
Sbjct: 128 TFRYVSDE------FVEPEATKEVEESQSTNAI--TAEPANESVEAVIVPTEAKTTVTKP 179
Query: 1081 ATPPPPVTAQKPKEPIAE--------TAAAAAADGAKKSYAAMVQSMLRNAAPFQVKAAP 926
A+ P A+ P+E + A + KKS+A +VQS+ ++A QVKA+P
Sbjct: 180 ASAIPNGHAKVPEEKVVNENSSLPKAAEAKLQEEVPKKSFALIVQSLAQSAGTLQVKASP 239
Query: 925 AVQKPKTMAPSKGRAAPAPAASAVGKPEKKSDQRIVDEPGTSVFVSNLPMDAKAPQLYEL 746
+KP K AAP A + + + ++ G+S+FV+NLPMDA QLYE
Sbjct: 240 VKRKP----VEKPVAAPERKAPSPIRKQASAESIKPQAQGSSIFVANLPMDATIEQLYET 295
Query: 745 FKAFGPIKEGGVQIRSSRASGRCFGFVSFESVASVQSMLKAAKSNPFKLGDHKLRVKEKQ 566
FK+FG I++ G+Q+RS C GFV+FE+ +V+++ +A + +P ++G+ + ++EK+
Sbjct: 296 FKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAVKNVFQAHRESPIRIGNRRASIEEKR 355
Query: 565 VEYDGSKQSGGR---SGGGGSKAQNGSVEESKTPTGSVVDESKTPTGSADGSKSENGSSA 395
G+ Q+G R G K ++G + P GS V+ + G N S
Sbjct: 356 ---GGNNQNGNRVSTRNNSGYKNEDGFRRDGYKPRGSGVNGGR-------GYGRRNSESN 405
Query: 394 GGGE 383
G G+
Sbjct: 406 GDGK 409
>TAIR9_protein||AT1G13730.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:4710519-4712332 FORWARD
Length = 429
Score = 214 bits (543), Expect = 2e-055
Identities = 131/407 (32%), Positives = 212/407 (52%), Gaps = 13/407 (3%)
Frame = -3
Query: 1591 LSEAFVEQYYYIMGSATHEAHRLYVDGSVVTRPGGPDGSMLSFTSLEAIKEHYLTYEYKG 1412
+ +FVE+YY ++ + + H+ Y+D SV+ RPG DG M+S SL+AI E ++++Y+
Sbjct: 15 IGNSFVEKYYNLLYKSPSQVHQFYLDDSVLGRPGS-DGEMVSVKSLKAINEQIMSFDYEI 73
Query: 1411 NTYDVLSVDSQRSLQDGIIIMVVGFLTGEDKLKRKFSQTFYLAPQDKAHVVVNDMYRFVD 1232
+ +L+ DSQ S +G++ +V G LT ++ + +FSQ+F+L P + ++ V+ND++R+V
Sbjct: 74 SKIQILTADSQASYMNGVVTLVTGLLTVKEGQRMRFSQSFFLVPLNGSYFVLNDVFRYVA 133
Query: 1231 EEESSPPTLVESEVAKPVDVISKTELVHMVDAPAKKSVNTAEVKKVVAAEATPPPPVTAQ 1052
+E P + V+ TE V V P E K+ P A
Sbjct: 134 DEIVEPEANKKEVEEVIPQVVQPTEQVDEVAEPVTIPTQQPEAKQTTENTVKKPERAVAN 193
Query: 1051 ---KPKEPIAETAAAAAADGAKKSYAAMVQSMLRNAAPFQVKAAPAVQKPKTMA-PSKGR 884
K +E + D KKS+A +VQ + +N A F KA+PA K K + PS R
Sbjct: 194 GHPKTQEDNVVNDKSNGVDAPKKSFAHIVQDLAQNGATFNAKASPAKPKSKPVTKPSAAR 253
Query: 883 AAPAPAASAVGKPEKKSDQRIVDEPGTSVFVSNLPMDAKAPQLYELFKAFGPIKEGGVQI 704
+ APA + DQ+ G ++FV+NL MDA QL E FK FG I + G+Q+
Sbjct: 254 ESKAPAPVSEHSSAATIDQQ---AEGYTIFVANLLMDATPEQLNETFKGFGAITKDGIQV 310
Query: 703 RSSRASGRCFGFVSFESVASVQSMLKAAKSNPFKLGDHKLRVKEKQVEYDGSKQSGGRSG 524
RS R G CFGFV+F S +V+ +L+A K + ++G+ ++ ++EK+ D + +
Sbjct: 311 RSYRLKGNCFGFVTFASAEAVKLVLQAHKESAIRIGNRRVSIEEKRGNNDNGRPA---MR 367
Query: 523 GGGSKAQNGSVEESKTPTGSVVDESK--TPTGSADGSKSENGSSAGG 389
GG + NG + P G+ + + GS +S NG + G
Sbjct: 368 NGGYRNDNGYRNDGYRPRGNGSNGGRGYGRNGSERRGESRNGEAHNG 414
>TAIR9_protein||AT5G60980.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:24543988-24546027 FORWARD
Length = 460
Score = 117 bits (291), Expect = 4e-026
Identities = 54/125 (43%), Positives = 89/125 (71%), Gaps = 1/125 (0%)
Frame = -3
Query: 1597 EVLSEAFVEQYYYIMGSATHEAHRLYVDGSVVTRPGGPDGSMLSFTSLEAIKEHYLTYEY 1418
EV+ AFVEQYY+I+ + HR Y D S +TRP G++ + T+++AI + L+ +Y
Sbjct: 13 EVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRP-DVTGAVTTVTTMQAINDKILSLKY 71
Query: 1417 KGNTYDVLSVDSQRSLQDGIIIMVVGFLTGEDKLKRKFSQTFYLAPQDKAHVVVNDMYRF 1238
+ T ++ + D+Q S + G+I++V G LTG D +++KFSQ+F+LAPQDK + V+ND++RF
Sbjct: 72 EDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDKGYFVLNDVFRF 131
Query: 1237 VDEEE 1223
++E+E
Sbjct: 132 LEEKE 136
>TAIR9_protein||AT5G60980.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:24543988-24546027 FORWARD
Length = 461
Score = 117 bits (291), Expect = 4e-026
Identities = 54/125 (43%), Positives = 89/125 (71%), Gaps = 1/125 (0%)
Frame = -3
Query: 1597 EVLSEAFVEQYYYIMGSATHEAHRLYVDGSVVTRPGGPDGSMLSFTSLEAIKEHYLTYEY 1418
EV+ AFVEQYY+I+ + HR Y D S +TRP G++ + T+++AI + L+ +Y
Sbjct: 13 EVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRP-DVTGAVTTVTTMQAINDKILSLKY 71
Query: 1417 KGNTYDVLSVDSQRSLQDGIIIMVVGFLTGEDKLKRKFSQTFYLAPQDKAHVVVNDMYRF 1238
+ T ++ + D+Q S + G+I++V G LTG D +++KFSQ+F+LAPQDK + V+ND++RF
Sbjct: 72 EDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDKGYFVLNDVFRF 131
Query: 1237 VDEEE 1223
++E+E
Sbjct: 132 LEEKE 136
Score = 100 bits (248), Expect = 4e-021
Identities = 68/195 (34%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Frame = -3
Query: 1096 VVAAEATPPPPVTAQKPKEPIAETAAAAAADGAKKSYAAMVQSMLRNAAP----FQVKAA 929
VV E PP + E + D K SYA++++ M + AP + K
Sbjct: 200 VVDVEPIEPPTQISHN------EILSVPQGDAPKHSYASILKQMKSSPAPTTHVARNKPR 253
Query: 928 PAVQKPKTMAPSKGRAAPAPAASAVGKPEKKSDQRIVDEPGTSVFVSNLPMDAKAPQLYE 749
PA K AP AA A++ P S V++ G S++V NLP D+ QL E
Sbjct: 254 PAPVNQKLTAPPAEPAARPEASAHENVP--NSSHVDVEDDGHSIYVRNLPFDSTPTQLEE 311
Query: 748 LFKAFGPIKEGGVQIRSSRASGRCFGFVSFESVASVQSMLKAAKSNPFKLGDHKLRVKEK 569
+FK FG IK G+Q+RS++ G CFGFV FE+ + QS L+A +P +GD + V+EK
Sbjct: 312 VFKNFGAIKHEGIQVRSNKQQGFCFGFVEFETSSGKQSALEA---SPVTIGDRQAVVEEK 368
Query: 568 QVEYDGSKQSGGRSG 524
+ G +GG G
Sbjct: 369 KTNSRGGGNNGGSRG 383
>TAIR9_protein||AT3G55540.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein | chr3:20598218-20599614 FORWARD
Length = 335
Score = 101 bits (250), Expect = 2e-021
Identities = 57/134 (42%), Positives = 88/134 (65%), Gaps = 7/134 (5%)
Frame = -3
Query: 1597 EVLSEAFVEQYYYIMGSATHEAHRL-YVDGSVVTRPGGPDGSMLSFTSLEAIKEHYLTYE 1421
E L+ F++ Y+ +G + Y D SV+TRP GPDG+M+SFTS EAI+E ++ +
Sbjct: 30 EALANCFLQSYFLNLGVYPEVVQMMWYADDSVMTRP-GPDGTMMSFTSPEAIQEQIVSCD 88
Query: 1420 YKGNTYDVLSVDSQ---RSLQDGIIIMVVGFLTGEDK-LKRKFSQTFYLA-PQDKAHVVV 1256
Y+G ++DV+S +Q S +DG IMV GFLT +DK ++R+F Q+ YLA QD+++ +V
Sbjct: 89 YEGASFDVMSFAAQSCNTSSEDGAFIMVTGFLTCKDKQVRRRFVQSLYLARRQDRSYAIV 148
Query: 1255 NDMYRFVDEEESSP 1214
ND R++D + P
Sbjct: 149 NDFLRYIDSIPALP 162
>TAIR9_protein||AT3G25150.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr3:9157161-9159362 REVERSE
Length = 489
Score = 101 bits (249), Expect = 3e-021
Identities = 50/124 (40%), Positives = 81/124 (65%), Gaps = 3/124 (2%)
Frame = -3
Query: 1597 EVLSEAFVEQYYYIMGSATHEAHRLYVDGSVVTRPGGPDGSMLSFTS-LEAIKEHYLTYE 1421
+++ AFV QYY+I+ + HR Y + S + RP + ++S TS L+AI + +
Sbjct: 17 DMVGNAFVPQYYHILHQSPEHVHRFYQEISKLGRP--EENGLMSITSTLQAIDKKIMALG 74
Query: 1420 YKGNTYDVLSVDSQRSLQDGIIIMVVGFLTGEDKLKRKFSQTFYLAPQDKAHVVVNDMYR 1241
Y + ++ +VD+Q S G I++V G+LTG+D ++R FSQTF+LAPQ+ + V+NDM+R
Sbjct: 75 YGVISAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFLAPQETGYFVLNDMFR 134
Query: 1240 FVDE 1229
F+DE
Sbjct: 135 FIDE 138
>TAIR9_protein||AT5G48650.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:19727279-19729533 FORWARD
Length = 459
Score = 93 bits (229), Expect = 6e-019
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 3/170 (1%)
Frame = -3
Query: 1591 LSEAFVEQYYYIMGSATHEAHRLYVDGSVVTRPGGPDGSMLSFTSLEAIKEHYLTYEYKG 1412
+ AFV QYYYI + R Y + S V R G DG M F++ + I E Y
Sbjct: 16 VGSAFVNQYYYIFCNMPEHLPRFYQEISRVGRV-GQDGVMRDFSTFQGISEELKRLTYGD 74
Query: 1411 -NTYDVLSVDSQRSLQDGIIIMVVGFLTGEDKLKRKFSQTFYLAPQDKAHVVVNDMYRFV 1235
N+ ++ S D+Q S G ++ V G+ T ++ +RKF+QTF+LAPQ+K V+ND+ RFV
Sbjct: 75 CNSAEITSYDTQESHNGGFLLFVTGYFTLNERSRRKFTQTFFLAPQEKGFFVLNDILRFV 134
Query: 1234 -DEEESSPPTLVESEVAKPVDVISKTELVHMVDAPAKKSVNTAEVKKVVA 1088
D+ + + P ++ EV ++ + T + M + V+ V K V+
Sbjct: 135 NDDAKDNVPETIDGEVVSGINSTTPTIINGMKGSEQAACVSVNPVCKEVS 184
>TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr3:2300579-2308305 REVERSE
Length = 1295
Score = 91 bits (225), Expect = 2e-018
Identities = 55/153 (35%), Positives = 88/153 (57%), Gaps = 13/153 (8%)
Frame = -3
Query: 1627 GGAVVHSAPHEVLSEAFVEQYYYIMGSATHEAHRLYVDGSVVTRPGGPDGSMLSFTSLEA 1448
G V H H + + F QYY + +A ++LY D S ++RP G DG+M FT +
Sbjct: 269 GTNVSHPLRHITVGDEFARQYYNTLQNAPENLYKLYKDKSTISRP-GLDGTMRVFTLSKD 327
Query: 1447 IKEHYLTYEYKG--NTYDVLSVDSQRSLQDGIIIMVVGFLTGEDKLKRKFSQTFYLAPQD 1274
+K + G ++ + SV SQ SL+ GI+++V G+LT ++ R F+Q F+L PQ+
Sbjct: 328 LK-----WRSPGSFDSVKITSVTSQDSLKQGILVVVYGYLTFNERPARHFTQVFFLVPQE 382
Query: 1273 KAHVVVNDMYRFVDEEESS---PPT--LVESEV 1190
K ++V DM+RFVD E++ PP ++E +V
Sbjct: 383 KGYIVCTDMFRFVDIPEANAAIPPANDVIEEKV 415
>TAIR9_protein||AT5G43960.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:17689154-17691220 REVERSE
Length = 392
Score = 50 bits (119), Expect = 3e-006
Identities = 24/59 (40%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -3
Query: 1402 DVLSVDSQRSLQDGIIIMVVGFL-TGEDKLKRKFSQTFYLAPQDKAHVVVNDMYRFVDE 1229
+V +++S S + G++++V G + T E +R F QTF+LAPQ+K + V++D++ FVDE
Sbjct: 11 EVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEKGYFVLSDVFLFVDE 69
>TAIR9_protein||AT4G03110.1 | Symbols: | RNA-binding protein, putative |
chr4:1376612-1379275 REVERSE
Length = 442
Score = 50 bits (118), Expect = 4e-006
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Frame = -3
Query: 949 PFQVKAAPAVQKPKTMAPSKGRAAPAPAAS-AVGKPEKKSDQRIVDEPGTSVFVSNLPMD 773
PF + P+ ++ S G +P + +G S + G ++F+ N+P +
Sbjct: 303 PFPFAYPRGIVSPRPLSSSPGSISPGMSTPLGIG---LSSVVQTEGPEGANLFIYNIPRE 359
Query: 772 AKAPQLYELFKAFGPIKEGGVQIRSSRASGRCFGFVSFESVASVQSMLKAAKSNPFKLGD 593
+L F++FG + V + + +CFGFVS++S A+ Q+ + N LG
Sbjct: 360 FGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAID--MMNGRHLGG 417
Query: 592 HKLRVKEKQVEYDGSKQS 539
KL+V+ K+ +G S
Sbjct: 418 KKLKVQLKRDSNNGQPSS 435
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,459,653,557
Number of Sequences: 33410
Number of Extensions: 10459653557
Number of Successful Extensions: 353860551
Number of sequences better than 0.0: 0
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