BLASTX 7.6.2
Query= UN20089 /QuerySize=826
(825 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15226755|ref|NP_180995.1| 60S ribosomal protein L18a-2 [Arabi... 356 2e-096
gi|118482586|gb|ABK93213.1| unknown [Populus trichocarpa] 353 2e-095
gi|255628313|gb|ACU14501.1| unknown [Glycine max] 351 8e-095
gi|224078998|ref|XP_002305712.1| predicted protein [Populus tric... 351 1e-094
gi|224116756|ref|XP_002317384.1| predicted protein [Populus tric... 350 2e-094
gi|224062663|ref|XP_002300869.1| predicted protein [Populus tric... 349 4e-094
gi|247421866|gb|ACS96446.1| 60S ribosomal protein L18a [Jatropha... 347 2e-093
gi|118484993|gb|ABK94361.1| unknown [Populus trichocarpa] 346 2e-093
gi|297830008|ref|XP_002882886.1| 60S ribosomal protein L18A [Ara... 346 3e-093
gi|255575183|ref|XP_002528496.1| 60S ribosomal protein L18a, put... 346 4e-093
gi|255627767|gb|ACU14228.1| unknown [Glycine max] 346 4e-093
gi|255629253|gb|ACU14971.1| unknown [Glycine max] 345 5e-093
gi|225462960|ref|XP_002268750.1| PREDICTED: similar to RPL18AA (... 345 7e-093
gi|225463466|ref|XP_002276260.1| PREDICTED: hypothetical protein... 344 1e-092
gi|255557335|ref|XP_002519698.1| 60S ribosomal protein L18a, put... 344 1e-092
gi|225463470|ref|XP_002276512.1| PREDICTED: similar to RPL18AA (... 344 2e-092
gi|255631354|gb|ACU16044.1| unknown [Glycine max] 343 2e-092
gi|21362874|sp|Q9ATF5.1|RL18A_CASSA RecName: Full=60S ribosomal ... 342 4e-092
gi|217072984|gb|ACJ84852.1| unknown [Medicago truncatula] 342 6e-092
gi|293337353|gb|ADE42972.1| putative 60S ribosomal protein L18a ... 342 6e-092
>gi|15226755|ref|NP_180995.1| 60S ribosomal protein L18a-2 [Arabidopsis
thaliana]
Length = 178
Score = 356 bits (913), Expect = 2e-096
Identities = 171/178 (96%), Positives = 176/178 (98%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
M AFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM
Sbjct: 1 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEI+EKNPT IKN+GIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPP+RKLKTTYKA+KPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178
>gi|118482586|gb|ABK93213.1| unknown [Populus trichocarpa]
Length = 178
Score = 353 bits (905), Expect = 2e-095
Identities = 168/178 (94%), Positives = 174/178 (97%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV FRFHQYQVVGRALPTE D PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVTFRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLVF+KVRPP+RKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLFM 178
>gi|255628313|gb|ACU14501.1| unknown [Glycine max]
Length = 178
Score = 351 bits (900), Expect = 8e-095
Identities = 168/178 (94%), Positives = 172/178 (96%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV FRFHQYQVVGRALPTE DV PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM
Sbjct: 1 MVTFRFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVE MY EMASRHRVR
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLVF+KVRPPTRKLKTTYKA+KPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKATKPNLFM 178
>gi|224078998|ref|XP_002305712.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 351 bits (898), Expect = 1e-094
Identities = 167/178 (93%), Positives = 173/178 (97%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV FRFHQYQVVGRALPT D PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVTFRFHQYQVVGRALPTGSDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLVF+KVRPP+RKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLFM 178
>gi|224116756|ref|XP_002317384.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 350 bits (896), Expect = 2e-094
Identities = 166/178 (93%), Positives = 173/178 (97%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV FRFHQYQVVGRALPT+ D PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVTFRFHQYQVVGRALPTQSDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLVF+KVRPP+RKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLFM 178
>gi|224062663|ref|XP_002300869.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 349 bits (894), Expect = 4e-094
Identities = 166/178 (93%), Positives = 173/178 (97%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV+FRFHQYQVVGRALPTE D PKIYRMKLWATNEVR+KSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVSFRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRSKSKFWYFLRKLKKVKKSNGQI 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMY EMASRHRVR
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRS 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLVF+KVRPPTRKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178
>gi|247421866|gb|ACS96446.1| 60S ribosomal protein L18a [Jatropha curcas]
Length = 178
Score = 347 bits (888), Expect = 2e-093
Identities = 163/178 (91%), Positives = 172/178 (96%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV ++FHQYQVVGR LPTE D PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVTYKFHQYQVVGRGLPTENDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKT T+PAKLCKRES+KQFHNSKIKFPLVF+KVRPPTRKL+TTYKAS+PNLFM
Sbjct: 121 PCIQIIKTGTIPAKLCKRESSKQFHNSKIKFPLVFKKVRPPTRKLRTTYKASRPNLFM 178
>gi|118484993|gb|ABK94361.1| unknown [Populus trichocarpa]
Length = 178
Score = 346 bits (887), Expect = 2e-093
Identities = 165/178 (92%), Positives = 172/178 (96%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV+FRFHQYQVVGRALPTE D PKIYRMKLWATNEVR+KSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVSFRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRSKSKFWYFLRKLKKVKKSNGQI 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMY EMASRHRVR
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRS 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKR STKQFHNSKIKFPLVF+KVRPPTRKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRGSTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178
>gi|297830008|ref|XP_002882886.1| 60S ribosomal protein L18A [Arabidopsis lyrata
subsp. lyrata]
Length = 178
Score = 346 bits (886), Expect = 3e-093
Identities = 167/178 (93%), Positives = 169/178 (94%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
M AFRFHQYQVVGRALPTEKD PKIYRMKLW NEV AKSKFWYF+RKLKKVKKSNGQM
Sbjct: 1 MGAFRFHQYQVVGRALPTEKDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQM 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKE+RDTTLNG VEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRF 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTATVPAKLCKRE TKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 178
>gi|255575183|ref|XP_002528496.1| 60S ribosomal protein L18a, putative [Ricinus
communis]
Length = 178
Score = 346 bits (885), Expect = 4e-093
Identities = 164/178 (92%), Positives = 173/178 (97%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV FRFHQYQVVGRALPTE D PKIYRMKLW+TNEVRAKSKFWYFLRKLKKVK+SNGQ+
Sbjct: 1 MVTFRFHQYQVVGRALPTENDDHPKIYRMKLWSTNEVRAKSKFWYFLRKLKKVKRSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEK+PTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKSPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
CIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLVF+KVRPP+RKLKTTYKAS+PNLFM
Sbjct: 121 SCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLFM 178
>gi|255627767|gb|ACU14228.1| unknown [Glycine max]
Length = 178
Score = 346 bits (885), Expect = 4e-093
Identities = 165/178 (92%), Positives = 170/178 (95%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV FRFHQYQVVGRALPTE D PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVTFRFHQYQVVGRALPTEADQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVE MY EMASRHRVR
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYNEMASRHRVRS 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLV++KVRPPTRKLKTTYKA KPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKAKKPNLFM 178
>gi|255629253|gb|ACU14971.1| unknown [Glycine max]
Length = 178
Score = 345 bits (884), Expect = 5e-093
Identities = 165/178 (92%), Positives = 170/178 (95%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV FRFHQYQVVGRALPTE D PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVTFRFHQYQVVGRALPTEADQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNG+VE MY EMASRHRVR
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGSVEAMYNEMASRHRVRS 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLVF+KVRPPTRKLKTTYKA KPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFQKVRPPTRKLKTTYKAKKPNLFM 178
>gi|225462960|ref|XP_002268750.1| PREDICTED: similar to RPL18AA (60S RIBOSOMAL
PROTEIN L18A-1); structural constituent of ribosome [Vitis vinifera]
Length = 178
Score = 345 bits (883), Expect = 7e-093
Identities = 163/178 (91%), Positives = 172/178 (96%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV F+FHQYQVVGRALP+E D P+IYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVTFKFHQYQVVGRALPSESDEHPRIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNG+VEQMYTEMASRHRVR+
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGSVEQMYTEMASRHRVRY 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKRESTKQ HNSKIKFPLV RKVRPPTRKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQMHNSKIKFPLVVRKVRPPTRKLKTTYKASRPNLFM 178
>gi|225463466|ref|XP_002276260.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 178
Score = 344 bits (881), Expect = 1e-092
Identities = 164/178 (92%), Positives = 170/178 (95%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV FRFHQYQVVGRALP+E D PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMY EMASRHRVR
Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYAEMASRHRVRS 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKRES+KQFHNSKIKFPL FRKVRPPTRKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLTFRKVRPPTRKLKTTYKASRPNLFM 178
>gi|255557335|ref|XP_002519698.1| 60S ribosomal protein L18a, putative [Ricinus
communis]
Length = 303
Score = 344 bits (881), Expect = 1e-092
Identities = 164/176 (93%), Positives = 169/176 (96%)
Frame = +2
Query: 104 AFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLA 283
A FHQYQVVGR LPTE D PKIYRMKLWATNE RAKSKFWYFLRKLKKVKKSNGQ+LA
Sbjct: 128 AIAFHQYQVVGRGLPTEADDHPKIYRMKLWATNEFRAKSKFWYFLRKLKKVKKSNGQVLA 187
Query: 284 INEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRFPC 463
INEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMYTEMASRHRVRFPC
Sbjct: 188 INEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPC 247
Query: 464 IQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
IQIIKTAT+PAKLCKRESTKQFHNSKIKFPLVF+KVRPPTRKLKTTYKAS+PNLFM
Sbjct: 248 IQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 303
>gi|225463470|ref|XP_002276512.1| PREDICTED: similar to RPL18AA (60S RIBOSOMAL
PROTEIN L18A-1); structural constituent of ribosome isoform 1 [Vitis
vinifera]
Length = 178
Score = 344 bits (880), Expect = 2e-092
Identities = 164/178 (92%), Positives = 170/178 (95%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV FRFHQYQVVGRALP+E D PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVTFRFHQYQVVGRALPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMY EMASRHRVR
Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYAEMASRHRVRS 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKRES+KQFHNSKIKFPL FRKVRPPTRKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLTFRKVRPPTRKLKTTYKASRPNLFM 178
>gi|255631354|gb|ACU16044.1| unknown [Glycine max]
Length = 178
Score = 343 bits (879), Expect = 2e-092
Identities = 164/178 (92%), Positives = 171/178 (96%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MVA RFHQYQVVGRALPTE D PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVAMRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFE+NPTKIKN GIWLRYQSRTGYHNMYKE+RDTTLNGAVE MYTEMASRHRVR
Sbjct: 61 LAINEIFERNPTKIKNCGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYTEMASRHRVRH 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKRESTKQFHNSKI+FPLVF+KVRPPTRKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIEFPLVFKKVRPPTRKLKTTYKASRPNLFM 178
>gi|21362874|sp|Q9ATF5.1|RL18A_CASSA RecName: Full=60S ribosomal protein L18a
Length = 178
Score = 342 bits (877), Expect = 4e-092
Identities = 163/178 (91%), Positives = 170/178 (95%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV FRFHQYQVVGR LP+E D PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM
Sbjct: 1 MVTFRFHQYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMY EMASRHRVRF
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRF 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PAKLCKRES+KQFHNSKIKFPLV RK+RPP+RKLKT YKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178
>gi|217072984|gb|ACJ84852.1| unknown [Medicago truncatula]
Length = 178
Score = 342 bits (875), Expect = 6e-092
Identities = 162/178 (91%), Positives = 169/178 (94%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV +FHQYQVVGRALPTEKD PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVNAKFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVE MY EMASRHRVRF
Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVETMYNEMASRHRVRF 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
PCIQIIKTAT+PA LCKRESTKQFHNSKIKFPLV++K+RPPTR LKTTYKA KPNLFM
Sbjct: 121 PCIQIIKTATIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRSLKTTYKAKKPNLFM 178
>gi|293337353|gb|ADE42972.1| putative 60S ribosomal protein L18a [Gardenia
jasminoides]
Length = 178
Score = 342 bits (875), Expect = 6e-092
Identities = 163/178 (91%), Positives = 172/178 (96%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
MV +RFHQYQVVGRALP+E D PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1 MVNYRFHQYQVVGRALPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMYTEMASRHRVR+
Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRY 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM 631
CIQIIKTATVPAKLCKRESTKQFHNSKI+FPLVF+KVRPP+RKLKTTYKAS+PNLFM
Sbjct: 121 HCIQIIKTATVPAKLCKRESTKQFHNSKIRFPLVFKKVRPPSRKLKTTYKASRPNLFM 178
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,368,797,218,133
Number of Sequences: 15229318
Number of Extensions: 2368797218133
Number of Successful Extensions: 592660124
Number of sequences better than 0.0: 0
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