BLASTX 7.6.2
Query= UN20089 /QuerySize=826
(825 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G34480.1 | Symbols: | 60S ribosomal protein L... 357 8e-099
TAIR9_protein||AT3G14600.1 | Symbols: | 60S ribosomal protein L... 341 3e-094
TAIR9_protein||AT1G29965.1 | Symbols: | 60S ribosomal protein L... 341 6e-094
TAIR9_protein||AT1G29970.2 | Symbols: RPL18AA | RPL18AA (60S RIB... 337 5e-093
>TAIR9_protein||AT2G34480.1 | Symbols: | 60S ribosomal protein L18A (RPL18aB) |
chr2:14532916-14534161 REVERSE
Length = 179
Score = 357 bits (914), Expect = 8e-099
Identities = 171/179 (95%), Positives = 176/179 (98%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
M AFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM
Sbjct: 1 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEI+EKNPT IKN+GIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM* 634
PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPP+RKLKTTYKA+KPNLFM*
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM* 179
>TAIR9_protein||AT3G14600.1 | Symbols: | 60S ribosomal protein L18A (RPL18aC) |
chr3:4910773-4911933 FORWARD
Length = 179
Score = 341 bits (874), Expect = 3e-094
Identities = 164/179 (91%), Positives = 167/179 (93%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
M FRFHQYQVVGRALPTE D PKIYRMKLW NEV AKSKFWYF+RKLKKVKKSNGQM
Sbjct: 1 MGGFRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQM 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKE+RDTTLNG VEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRF 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM* 634
PCIQIIKTATVPAKLCKRE TKQFHNSKIKFPLVFRKVRPP+RKLKTTYKASKPNLFM*
Sbjct: 121 PCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM* 179
>TAIR9_protein||AT1G29965.1 | Symbols: | 60S ribosomal protein L18A (RPL18aA)
| chr1:10498458-10499373 REVERSE
Length = 179
Score = 341 bits (872), Expect = 6e-094
Identities = 163/179 (91%), Positives = 169/179 (94%)
Frame = +2
Query: 98 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 277
M R HQYQVVGRALPTEKD QPKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQM
Sbjct: 1 MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60
Query: 278 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRF 457
LAINEIFEKNPT IKN+GIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 458 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM* 634
PCIQIIKTATVPA LCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTT+KA+KPNLFM*
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM* 179
>TAIR9_protein||AT1G29970.2 | Symbols: RPL18AA | RPL18AA (60S RIBOSOMAL PROTEIN
L18A-1); structural constituent of ribosome | chr1:10498458-10501311
REVERSE
Length = 313
Score = 337 bits (864), Expect = 5e-093
Identities = 161/173 (93%), Positives = 167/173 (96%)
Frame = +2
Query: 116 HQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEI 295
HQYQVVGRALPTEKD QPKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQMLAINEI
Sbjct: 141 HQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINEI 200
Query: 296 FEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYTEMASRHRVRFPCIQII 475
FEKNPT IKN+GIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMYTEMASRHRVRFPCIQII
Sbjct: 201 FEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQII 260
Query: 476 KTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM* 634
KTATVPA LCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTT+KA+KPNLFM*
Sbjct: 261 KTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM* 313
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,459,653,557
Number of Sequences: 33410
Number of Extensions: 10459653557
Number of Successful Extensions: 353860551
Number of sequences better than 0.0: 0
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