BLASTX 7.6.2
Query= UN20161 /QuerySize=1513
(1512 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G12120.1 | Symbols: FAD2 | FAD2 (FATTY ACID DE... 750 7e-217
TAIR9_protein||AT3G12120.2 | Symbols: FAD2 | FAD2 (FATTY ACID DE... 750 7e-217
TAIR9_protein||AT2G29980.1 | Symbols: FAD3 | FAD3 (FATTY ACID DE... 237 1e-062
TAIR9_protein||AT5G05580.1 | Symbols: FAD8 | FAD8 (FATTY ACID DE... 219 6e-057
TAIR9_protein||AT3G11170.1 | Symbols: FAD7, FADD | FAD7 (FATTY A... 215 6e-056
TAIR9_protein||AT2G29980.2 | Symbols: FAD3 | FAD3 (FATTY ACID DE... 159 5e-039
TAIR9_protein||AT2G40070.1 | Symbols: | FUNCTIONS IN: molecular... 75 1e-013
TAIR9_protein||AT2G40070.2 | Symbols: | FUNCTIONS IN: molecular... 75 1e-013
TAIR9_protein||AT2G45000.1 | Symbols: EMB2766 | EMB2766 (EMBRYO ... 60 3e-009
TAIR9_protein||AT4G18670.1 | Symbols: | protein binding / struc... 57 4e-008
TAIR9_protein||AT1G62760.1 | Symbols: | invertase/pectin methyl... 53 4e-007
TAIR9_protein||AT3G09000.1 | Symbols: | proline-rich family pro... 52 7e-007
TAIR9_protein||AT4G27520.1 | Symbols: | plastocyanin-like domai... 49 6e-006
>TAIR9_protein||AT3G12120.1 | Symbols: FAD2 | FAD2 (FATTY ACID DESATURASE 2);
delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase |
chr3:3860592-3861743 REVERSE
Length = 384
Score = 750 bits (1935), Expect = 7e-217
Identities = 348/384 (90%), Positives = 362/384 (94%), Gaps = 1/384 (0%)
Frame = +3
Query: 177 GAGGGMQVSPSPKKSETDTLKRVPCETPPFTVGQLKKAIPPHCFKRSIPRSFSYLIWDII 356
GAGG M V S KKSETDT KRVPCE PPF+VG LKKAIPPHCFKRSIPRSFSYLI DII
Sbjct: 2 GAGGRMPVPTSSKKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDII 61
Query: 357 IASCFYYVATTYFPLLPHPLSYFAWPLYWACQGCVLTGVWVIAHECGHHAFSDYQWLDDT 536
IASCFYYVAT YF LLP PLSY AWPLYWACQGCVLTG+WVIAHECGHHAFSDYQWLDDT
Sbjct: 62 IASCFYYVATNYFSLLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDT 121
Query: 537 VGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVM 716
VGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPK+KS IKWYGKYLNNPLGR +M
Sbjct: 122 VGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMM 181
Query: 717 LTVQFTLGWPLYLAFNVSGRPYDGGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLY 896
LTVQF LGWPLYLAFNVSGRPYD GFACHF PNAPIYNDRERLQIY+SDAGILAVC+GLY
Sbjct: 182 LTVQFVLGWPLYLAFNVSGRPYD-GFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLY 240
Query: 897 RYAAAQGLASMVCLYGVPLLIVNGFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD 1076
RYAAAQG+ASM+CLYGVPLLIVN FLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD
Sbjct: 241 RYAAAQGMASMICLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD 300
Query: 1077 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGDYYQFDGTPVFKAMWREAK 1256
YGILNKVFHNITDTHVAHHLFSTMPHY+AMEATKAIKPILGDYYQFDGTP + AM+REAK
Sbjct: 301 YGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILGDYYQFDGTPWYVAMYREAK 360
Query: 1257 ECIYVEPDRQGEKKGVFWYNNKL* 1328
ECIYVEPDR+G+KKGV+WYNNKL*
Sbjct: 361 ECIYVEPDREGDKKGVYWYNNKL* 384
>TAIR9_protein||AT3G12120.2 | Symbols: FAD2 | FAD2 (FATTY ACID DESATURASE 2);
delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase |
chr3:3860592-3861743 REVERSE
Length = 384
Score = 750 bits (1935), Expect = 7e-217
Identities = 348/384 (90%), Positives = 362/384 (94%), Gaps = 1/384 (0%)
Frame = +3
Query: 177 GAGGGMQVSPSPKKSETDTLKRVPCETPPFTVGQLKKAIPPHCFKRSIPRSFSYLIWDII 356
GAGG M V S KKSETDT KRVPCE PPF+VG LKKAIPPHCFKRSIPRSFSYLI DII
Sbjct: 2 GAGGRMPVPTSSKKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDII 61
Query: 357 IASCFYYVATTYFPLLPHPLSYFAWPLYWACQGCVLTGVWVIAHECGHHAFSDYQWLDDT 536
IASCFYYVAT YF LLP PLSY AWPLYWACQGCVLTG+WVIAHECGHHAFSDYQWLDDT
Sbjct: 62 IASCFYYVATNYFSLLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDT 121
Query: 537 VGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVM 716
VGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPK+KS IKWYGKYLNNPLGR +M
Sbjct: 122 VGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMM 181
Query: 717 LTVQFTLGWPLYLAFNVSGRPYDGGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLY 896
LTVQF LGWPLYLAFNVSGRPYD GFACHF PNAPIYNDRERLQIY+SDAGILAVC+GLY
Sbjct: 182 LTVQFVLGWPLYLAFNVSGRPYD-GFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLY 240
Query: 897 RYAAAQGLASMVCLYGVPLLIVNGFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD 1076
RYAAAQG+ASM+CLYGVPLLIVN FLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD
Sbjct: 241 RYAAAQGMASMICLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD 300
Query: 1077 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGDYYQFDGTPVFKAMWREAK 1256
YGILNKVFHNITDTHVAHHLFSTMPHY+AMEATKAIKPILGDYYQFDGTP + AM+REAK
Sbjct: 301 YGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILGDYYQFDGTPWYVAMYREAK 360
Query: 1257 ECIYVEPDRQGEKKGVFWYNNKL* 1328
ECIYVEPDR+G+KKGV+WYNNKL*
Sbjct: 361 ECIYVEPDREGDKKGVYWYNNKL* 384
>TAIR9_protein||AT2G29980.1 | Symbols: FAD3 | FAD3 (FATTY ACID DESATURASE 3);
omega-3 fatty acid desaturase | chr2:12781787-12784946 REVERSE
Length = 387
Score = 237 bits (604), Expect = 1e-062
Identities = 131/324 (40%), Positives = 180/324 (55%), Gaps = 19/324 (5%)
Frame = +3
Query: 246 PCETPPFTVGQLKKAIPPHCFKRSIPRSFSYLIWDIIIASCFYYVATTYFPLLPHPLSYF 425
P PPF +G ++ AIP HC+ +S RS SY++ DII + +A Y S+F
Sbjct: 28 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAAL-AIAAVYVD------SWF 80
Query: 426 AWPLYWACQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRH 605
WPLYWA QG + ++V+ H+CGH +FSD L+ VG I HSF+LVPY W+ SHR H
Sbjct: 81 LWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTH 140
Query: 606 HSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFTLGWPLYLAFNVSGRPYD 785
H N G +E DE +VP + K + L TV L + L +PLYL + G+
Sbjct: 141 HQNHGHVENDESWVPLPERVYKKL-PHSTRMLRYTVPLPM---LAYPLYLCYRSPGKE-- 194
Query: 786 GGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLYRYAAAQGLASMVCLYGVPLLIVN 965
HF+P + ++ ER I S + L + G +++ +YGVP +I
Sbjct: 195 ---GSHFNPYSSLFAPSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFV 251
Query: 966 GFLVLITYLQH--THPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLF 1139
+L +TYL H LP Y EW +LRG L T+DRDYGI N + H+I THV HHLF
Sbjct: 252 MWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDI-GTHVIHHLF 310
Query: 1140 STMPHYHAMEATKAIKPILGDYYQ 1211
+PHYH ++ATKA K +LG YY+
Sbjct: 311 PQIPHYHLVDATKAAKHVLGRYYR 334
>TAIR9_protein||AT5G05580.1 | Symbols: FAD8 | FAD8 (FATTY ACID DESATURASE 8);
omega-3 fatty acid desaturase | chr5:1664331-1666345 FORWARD
Length = 436
Score = 219 bits (556), Expect = 6e-057
Identities = 124/333 (37%), Positives = 178/333 (53%), Gaps = 19/333 (5%)
Frame = +3
Query: 219 SETDTLKRVPCETPPFTVGQLKKAIPPHCFKRSIPRSFSYLIWDIIIASCFYYVATTYFP 398
SE DT + P PPF + ++ AIP HC+ ++ S SY++ D+ I VA YF
Sbjct: 74 SEEDTERFDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVA-AYFN 132
Query: 399 LLPHPLSYFAWPLYWACQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYF 578
++ WPLYW QG + ++V+ H+CGH +FS+ L+ G + HS +LVPY
Sbjct: 133 ------NWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSSILVPYH 186
Query: 579 SWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFTLGWPLYLA 758
W+ SHR HH N G +E DE + P +S K L +T + +FTL +P+
Sbjct: 187 GWRISHRTHHQNHGHVENDESWHPLPESIYK--------NLEKTTQM-FRFTLPFPMLAY 237
Query: 759 FNVSGRPYDGGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLYRYAAAQGLASMVCL 938
G H+HP++ ++ +E+ + S A A+ L G M+ L
Sbjct: 238 PFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFVMGPIQMLKL 297
Query: 939 YGVPLLIVNGFLVLITYLQH--THPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNIT 1112
YG+P I +L +TYL H LP Y EW +LRG L T+DRDYG +N + H+I
Sbjct: 298 YGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI- 356
Query: 1113 DTHVAHHLFSTMPHYHAMEATKAIKPILGDYYQ 1211
THV HHLF +PHYH +EAT+A KP+LG YY+
Sbjct: 357 GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 389
>TAIR9_protein||AT3G11170.1 | Symbols: FAD7, FADD | FAD7 (FATTY ACID DESATURASE
7); omega-3 fatty acid desaturase | chr3:3499959-3502126 FORWARD
Length = 447
Score = 215 bits (547), Expect = 6e-056
Identities = 122/333 (36%), Positives = 176/333 (52%), Gaps = 20/333 (6%)
Frame = +3
Query: 222 ETDTLKRV-PCETPPFTVGQLKKAIPPHCFKRSIPRSFSYLIWDIIIASCFYYVATTYFP 398
E D +R P PPF + ++ AIP HC+ ++ +S SY++ D+ I A
Sbjct: 81 EEDNKQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAA---- 136
Query: 399 LLPHPLSYFAWPLYWACQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYF 578
+ ++ WPLYW QG + ++V+ H+CGH +FS+ L+ VG + HS +LVPY
Sbjct: 137 ---YLNNWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYH 193
Query: 579 SWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFTLGWPLYLA 758
W+ SHR HH N G +E DE + P + K Y L+ P L +P YL
Sbjct: 194 GWRISHRTHHQNHGHVENDESWHPMSE---KIYNT-LDKPTRFFRFTLPLVMLAYPFYLW 249
Query: 759 FNVSGRPYDGGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLYRYAAAQGLASMVCL 938
G+ H+HP++ ++ +ER + S A A+ L G M+ L
Sbjct: 250 ARSPGKK-----GSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKL 304
Query: 939 YGVPLLIVNGFLVLITYLQH--THPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNIT 1112
YG+P I +L +TYL H LP Y EW +LRG L T+DRDYG++N + H+I
Sbjct: 305 YGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDI- 363
Query: 1113 DTHVAHHLFSTMPHYHAMEATKAIKPILGDYYQ 1211
THV HHLF +PHYH +EAT+A KP+LG YY+
Sbjct: 364 GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 396
>TAIR9_protein||AT2G29980.2 | Symbols: FAD3 | FAD3 (FATTY ACID DESATURASE 3);
omega-3 fatty acid desaturase | chr2:12782257-12784946 REVERSE
Length = 289
Score = 159 bits (401), Expect = 5e-039
Identities = 92/251 (36%), Positives = 132/251 (52%), Gaps = 16/251 (6%)
Frame = +3
Query: 246 PCETPPFTVGQLKKAIPPHCFKRSIPRSFSYLIWDIIIASCFYYVATTYFPLLPHPLSYF 425
P PPF +G ++ AIP HC+ +S RS SY++ DII + +A Y S+F
Sbjct: 28 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAAL-AIAAVYVD------SWF 80
Query: 426 AWPLYWACQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRH 605
WPLYWA QG + ++V+ H+CGH +FSD L+ VG I HSF+LVPY W+ SHR H
Sbjct: 81 LWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTH 140
Query: 606 HSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFTLGWPLYLAFNVSGRPYD 785
H N G +E DE +VP + K + L TV L + L +PLYL + G+
Sbjct: 141 HQNHGHVENDESWVPLPERVYKKL-PHSTRMLRYTVPLPM---LAYPLYLCYRSPGKE-- 194
Query: 786 GGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLYRYAAAQGLASMVCLYGVPLLIVN 965
HF+P + ++ ER I S + L + G +++ +YGVP +I
Sbjct: 195 ---GSHFNPYSSLFAPSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFV 251
Query: 966 GFLVLITYLQH 998
+L +TYL H
Sbjct: 252 MWLDAVTYLHH 262
>TAIR9_protein||AT2G40070.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein
match is: proline-rich family protein (TAIR:AT3G09000.1); Has 94255
Blast hits to 49644 proteins in 1573 species: Archae - 225; Bacteria -
11215; Metazoa - 37735; Fungi - 21320; Plants - 3339; Viruses - 2662;
Other Eukaryotes - 17759 (source: NCBI BLink). | chr2:16728378-16731160
REVERSE
Length = 608
Score = 75 bits (183), Expect = 1e-013
Identities = 78/222 (35%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Frame = +1
Query: 277 SSRKRSHRTVSNAPSLAHSPTSSGTSS*PPASTTSPPLTSPSSLTLSPTSPGLSTGPAKA 456
S SHRT+ + + S ++ TS +ST S +S +SPGLS+ + A
Sbjct: 115 SLEMESHRTMMSQTGDSKSRPATLTSRLANSSTESAARNHLTS-RQQTSSPGLSSS-SGA 172
Query: 457 AS*PASGS*PTSAATTLSATTSGLTTPSVSS--STPSS---------SSLTSPGSTVTDA 603
+ P+S P S T + +S LT S SS STP+S SLT+ STV+
Sbjct: 173 SRRPSSSGGPGSRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSAT 232
Query: 604 TIPTPAPSRETKSSSPRRSPTSS-GTASTSTTLSDAPSC*PYSSL-SAGPCTWPSTSPAG 777
T PTP SR T SS R +PT+S T ST+ + P ++ SAGP ST+P
Sbjct: 233 TKPTPM-SRSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSR--STTPLS 289
Query: 778 LTTA-VSLAISTPTLPSTTTVNASRYTSPTPVSSPCATVSTA 900
+TA S S PTLP + T++ S + P++S A +TA
Sbjct: 290 RSTARSSTPTSRPTLPPSKTISRSSTPTRRPIASASAATTTA 331
>TAIR9_protein||AT2G40070.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein
match is: proline-rich family protein (TAIR:AT3G09000.1); Has 92805
Blast hits to 48882 proteins in 1559 species: Archae - 225; Bacteria -
11081; Metazoa - 37135; Fungi - 20962; Plants - 3300; Viruses - 2664;
Other Eukaryotes - 17438 (source: NCBI BLink). | chr2:16728378-16731040
REVERSE
Length = 568
Score = 75 bits (183), Expect = 1e-013
Identities = 78/222 (35%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Frame = +1
Query: 277 SSRKRSHRTVSNAPSLAHSPTSSGTSS*PPASTTSPPLTSPSSLTLSPTSPGLSTGPAKA 456
S SHRT+ + + S ++ TS +ST S +S +SPGLS+ + A
Sbjct: 75 SLEMESHRTMMSQTGDSKSRPATLTSRLANSSTESAARNHLTS-RQQTSSPGLSSS-SGA 132
Query: 457 AS*PASGS*PTSAATTLSATTSGLTTPSVSS--STPSS---------SSLTSPGSTVTDA 603
+ P+S P S T + +S LT S SS STP+S SLT+ STV+
Sbjct: 133 SRRPSSSGGPGSRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSAT 192
Query: 604 TIPTPAPSRETKSSSPRRSPTSS-GTASTSTTLSDAPSC*PYSSL-SAGPCTWPSTSPAG 777
T PTP SR T SS R +PT+S T ST+ + P ++ SAGP ST+P
Sbjct: 193 TKPTPM-SRSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSR--STTPLS 249
Query: 778 LTTA-VSLAISTPTLPSTTTVNASRYTSPTPVSSPCATVSTA 900
+TA S S PTLP + T++ S + P++S A +TA
Sbjct: 250 RSTARSSTPTSRPTLPPSKTISRSSTPTRRPIASASAATTTA 291
>TAIR9_protein||AT2G45000.1 | Symbols: EMB2766 | EMB2766 (EMBRYO DEFECTIVE
2766); structural constituent of nuclear pore | chr2:18564156-18567632
FORWARD
Length = 740
Score = 60 bits (145), Expect = 3e-009
Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 8/191 (4%)
Frame = +1
Query: 319 SLAHSPTSSGTSS*PPASTTSPPLTSPSSLTLSPTSPGLSTGPAKAAS*PASGS*PTSAA 498
S A S TSS T S PP + +S +S S T + + LSTG + A + SG+ + A
Sbjct: 340 STASSTTSSTTPSAPPQTASSS--SSFSFGTSANSGFNLSTGSSAAPASSTSGAVFSIAT 397
Query: 499 TTLSATTSGLTTPSVSSSTPSSSSLTSPGSTVTDATIPTPAPSRETKSSSPRRSPTSSGT 678
TT +++++ T + +SS P+S+ + AT TPA S T S++ +S T
Sbjct: 398 TTTTSSSTPAATSAPASSAPASTMAFPSFGVTSSATNTTPASSAATFSTT--GFGLASST 455
Query: 679 ASTSTTLSDAPSC*PYSSLSAGPCTWPSTSPAGLTTAVSLAIST-PTLPSTTTVNASRYT 855
+T +T S P +S A +TSPA + SL ST T P+T++ ++ T
Sbjct: 456 PATGSTNSFTGFAVPKTSTPASSSQPQTTSPA---FSFSLPSSTSTTAPATSSATTTQTT 512
Query: 856 SPTPVSSPCAT 888
P SS +T
Sbjct: 513 LVVPSSSGTST 523
Score = 56 bits (133), Expect = 6e-008
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Frame = +1
Query: 310 NAPSLAHSPTSSGTSS*PPASTTSPPLTSPSSLTLSPTSPGLSTGPAKAAS*PASGS*PT 489
++P S ++ T S +S++ +SPS +S + ++ + A++ P S S
Sbjct: 276 SSPFFGSSSSAGSTPSLFASSSSGATTSSPSPFGVSTFNSSSTSNTSNASASPFSASTGF 335
Query: 490 SAATTLSATTSGLTTPSVSSSTPSSSSLTSPGSTVTD----ATIPTPAPSRETK----SS 645
S + +++T+ TTPS T SSSS S G++ +T + AP+ T S
Sbjct: 336 SFLKSTASSTTSSTTPSAPPQTASSSSSFSFGTSANSGFNLSTGSSAAPASSTSGAVFSI 395
Query: 646 SPRRSPTSSGTASTSTTLSDAPSC----*PYSSLSAGPCTWPSTSPAGL-TTAVSLAIST 810
+ + +SS A+TS S AP+ + S+ T P++S A TT LA ST
Sbjct: 396 ATTTTTSSSTPAATSAPASSAPASTMAFPSFGVTSSATNTTPASSAATFSTTGFGLASST 455
Query: 811 PTLPST---TTVNASRYTSPTPVSSPCAT 888
P ST T + ++P S P T
Sbjct: 456 PATGSTNSFTGFAVPKTSTPASSSQPQTT 484
>TAIR9_protein||AT4G18670.1 | Symbols: | protein binding / structural
constituent of cell wall | chr4:10275918-10278491 REVERSE
Length = 858
Score = 57 bits (135), Expect = 4e-008
Identities = 52/160 (32%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Frame = +1
Query: 427 PGLSTGPAKAAS*PASGS*PTSAATTLSATTSGLTTPSVSSSTPSSSSLTSPGSTVTDAT 606
P T P+ S P+ P+ T S TTPS S PS S + SP ST
Sbjct: 411 PSPPTTPSPGGSPPSPSISPSPPITVPSPP----TTPSPGGSPPSPSIVPSPPSTTPSPG 466
Query: 607 IPTPAPSRETKSSSPRRSPTSSGTASTSTTLSDAPSC*PYSSLSAGPCT-WPSTSPAGLT 783
P +P+ T SP SPT+ + + P+ P S + P T P SP +
Sbjct: 467 SPPTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPT--PGGSPPSSPTTPSPGGSPPSPS 524
Query: 784 TAVSLAISTPTLPSTTTVNAS--RYTSPTPVSSPCATVST 897
+ S I+ P+ PST T S +SPTP SSP + T
Sbjct: 525 ISPSPPITVPSPPSTPTSPGSPPSPSSPTP-SSPIPSPPT 563
>TAIR9_protein||AT1G62760.1 | Symbols: | invertase/pectin methylesterase
inhibitor family protein | chr1:23237574-23238512 REVERSE
Length = 313
Score = 53 bits (126), Expect = 4e-007
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Frame = +1
Query: 295 HRTVSNAPSLAHSPTSSGTSS*PPASTTSPPLTSPSSLTLSPTSPGLSTGPAKAAS*PAS 474
H +++ + S +S SS P+ + SPP +SPSS S SP + P + P+S
Sbjct: 11 HLSIAILLFITTSSSSLSPSSSSPSLSPSPPSSSPSSAPPSSLSP---SSPPPLSLSPSS 67
Query: 475 GS*PTSAATTLSATTSGLTTPSVSSSTPSSSSLTSPGSTVTDATIPTPAPSRETKSSSPR 654
P +++ LS+ +PS+S S PSSS ++P S+++ + +P P + SS P
Sbjct: 68 PPPPPPSSSPLSS-----LSPSLSPSPPSSSPSSAPPSSLSPS---SPPPLSLSPSSPPP 119
Query: 655 RSPTSSGTASTSTTLSDA 708
P+SS +S S + S +
Sbjct: 120 PPPSSSPLSSLSPSSSSS 137
>TAIR9_protein||AT3G09000.1 | Symbols: | proline-rich family protein |
chr3:2746014-2748326 FORWARD
Length = 542
Score = 52 bits (124), Expect = 7e-007
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Frame = +1
Query: 487 TSAATTLSAT-TSGLTTPSVSSSTPSSSSLTSPGSTVTDATIPTPAPSRETKSSSPRRSP 663
+S +T+ AT T TTP+ S+S P ++ ++ S+ + A T +++PR +
Sbjct: 152 SSRSTSRPATPTRRSTTPTTSTSRPVTTRASNSRSSTPTSRATLTAARATTSTAAPRTTT 211
Query: 664 TSSGTASTSTTLSDAPSC*PYSSLSAGPCTWPST------SPAGLTTAVSLAISTPTLPS 825
TSSG+A ++T P P S+ S P + P+T +P G + S A S T PS
Sbjct: 212 TSSGSARSATPTRSNPR--PSSASSKKPVSRPATPTRRPSTPTGPSIVSSKAPSRGTSPS 269
Query: 826 TTTVNASRYTSPTPVSSPCATVSTA 900
T + S+ +P+ +SP T++++
Sbjct: 270 PTVNSLSK--APSRGTSPSPTLNSS 292
>TAIR9_protein||AT4G27520.1 | Symbols: | plastocyanin-like domain-containing
protein | chr4:13750668-13751819 REVERSE
Length = 350
Score = 49 bits (116), Expect = 6e-006
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Frame = +1
Query: 211 PRSQKP-TPSNAYPARHLPSQ*DSSRKRSHRTVSNAPSLAHSPTSS--GTSS*PPASTTS 381
P+S P +P+ + P P S K S+A S A SP S S P + TTS
Sbjct: 162 PKSSSPVSPTTSPPGSTTPPGGAHSPKS-----SSAVSPATSPPGSMAPKSGSPVSPTTS 216
Query: 382 PPLTSPSSLTLSPTSPGLSTGPAKAAS*PASGS*PTSAATTLSATTSGLTTPSVSSSTPS 561
PP S+ +SP+S +++ PA A +S P+SA T + + S S++P+
Sbjct: 217 PPAPPKSTSPVSPSSAPMTSPPAPMAPKSSSTIPPSSAPMTSPPGSMAPKSSSPVSNSPT 276
Query: 562 SSSLTSPGSTVTDATIPTPAPSRETKSSSPRRSPTSSGTAST 687
S +PG + + + +P+ S S P+++G ST
Sbjct: 277 VSPSLAPGGSTSSSPSDSPSGSAMGPSGD---GPSAAGDIST 315
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,459,653,557
Number of Sequences: 33410
Number of Extensions: 10459653557
Number of Successful Extensions: 353860551
Number of sequences better than 0.0: 0
|
